Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00964

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00963 and MPMX26_00964 are separated by 50 nucleotidesMPMX26_00964 and MPMX26_00965 are separated by 79 nucleotidesMPMX26_00965 and MPMX26_00966 are separated by 12 nucleotides MPMX26_00963: MPMX26_00963 - hypothetical protein, at 1,012,698 to 1,014,179 _00963 MPMX26_00964: MPMX26_00964 - Protein hcp1, at 1,014,230 to 1,014,733 _00964 MPMX26_00965: MPMX26_00965 - hypothetical protein, at 1,014,813 to 1,015,289 _00965 MPMX26_00966: MPMX26_00966 - hypothetical protein, at 1,015,302 to 1,017,110 _00966 Position (kb) 1014 1015Strain fitness (log2 ratio) -2 -1 0 1 2at 1013.284 kb on + strand, within MPMX26_00963at 1013.300 kb on + strand, within MPMX26_00963at 1013.310 kb on + strand, within MPMX26_00963at 1013.310 kb on + strand, within MPMX26_00963at 1013.310 kb on + strand, within MPMX26_00963at 1013.320 kb on + strand, within MPMX26_00963at 1013.381 kb on + strand, within MPMX26_00963at 1013.381 kb on + strand, within MPMX26_00963at 1013.386 kb on + strand, within MPMX26_00963at 1013.391 kb on + strand, within MPMX26_00963at 1013.396 kb on + strand, within MPMX26_00963at 1013.401 kb on + strand, within MPMX26_00963at 1013.401 kb on + strand, within MPMX26_00963at 1013.401 kb on + strand, within MPMX26_00963at 1013.401 kb on + strand, within MPMX26_00963at 1013.401 kb on + strand, within MPMX26_00963at 1013.406 kb on + strand, within MPMX26_00963at 1013.406 kb on + strand, within MPMX26_00963at 1013.406 kb on + strand, within MPMX26_00963at 1013.406 kb on + strand, within MPMX26_00963at 1013.406 kb on + strand, within MPMX26_00963at 1013.425 kb on + strand, within MPMX26_00963at 1013.456 kb on + strand, within MPMX26_00963at 1013.499 kb on + strand, within MPMX26_00963at 1013.499 kb on + strand, within MPMX26_00963at 1013.499 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.604 kb on + strand, within MPMX26_00963at 1013.621 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.667 kb on + strand, within MPMX26_00963at 1013.680 kb on + strand, within MPMX26_00963at 1013.693 kb on + strand, within MPMX26_00963at 1013.729 kb on + strand, within MPMX26_00963at 1013.734 kb on + strand, within MPMX26_00963at 1013.822 kb on + strand, within MPMX26_00963at 1013.839 kb on + strand, within MPMX26_00963at 1013.848 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.849 kb on + strand, within MPMX26_00963at 1013.867 kb on + strand, within MPMX26_00963at 1013.914 kb on + strand, within MPMX26_00963at 1013.922 kb on + strand, within MPMX26_00963at 1013.922 kb on + strand, within MPMX26_00963at 1013.971 kb on + strand, within MPMX26_00963at 1013.985 kb on + strand, within MPMX26_00963at 1014.083 kb on + strandat 1014.083 kb on + strandat 1014.083 kb on + strandat 1014.156 kb on + strandat 1014.156 kb on + strandat 1014.161 kb on + strandat 1014.293 kb on + strand, within MPMX26_00964at 1014.295 kb on + strand, within MPMX26_00964at 1014.295 kb on + strand, within MPMX26_00964at 1014.306 kb on + strand, within MPMX26_00964at 1014.313 kb on + strand, within MPMX26_00964at 1014.319 kb on + strand, within MPMX26_00964at 1014.329 kb on + strand, within MPMX26_00964at 1014.343 kb on + strand, within MPMX26_00964at 1014.343 kb on + strand, within MPMX26_00964at 1014.343 kb on + strand, within MPMX26_00964at 1014.343 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.366 kb on + strand, within MPMX26_00964at 1014.390 kb on + strand, within MPMX26_00964at 1014.390 kb on + strand, within MPMX26_00964at 1014.390 kb on + strand, within MPMX26_00964at 1014.404 kb on + strand, within MPMX26_00964at 1014.466 kb on + strand, within MPMX26_00964at 1014.467 kb on + strand, within MPMX26_00964at 1014.467 kb on + strand, within MPMX26_00964at 1014.467 kb on + strand, within MPMX26_00964at 1014.479 kb on + strand, within MPMX26_00964at 1014.505 kb on + strand, within MPMX26_00964at 1014.567 kb on + strand, within MPMX26_00964at 1014.567 kb on + strand, within MPMX26_00964at 1014.567 kb on + strand, within MPMX26_00964at 1014.567 kb on + strand, within MPMX26_00964at 1014.567 kb on + strand, within MPMX26_00964at 1014.567 kb on + strand, within MPMX26_00964at 1014.579 kb on + strand, within MPMX26_00964at 1014.602 kb on + strand, within MPMX26_00964at 1014.641 kb on + strand, within MPMX26_00964at 1014.642 kb on + strand, within MPMX26_00964at 1014.656 kb on + strand, within MPMX26_00964at 1014.658 kb on + strand, within MPMX26_00964at 1014.683 kb on + strandat 1014.718 kb on + strandat 1014.718 kb on + strandat 1014.728 kb on + strandat 1014.728 kb on + strandat 1014.728 kb on + strandat 1014.747 kb on + strandat 1014.747 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.752 kb on + strandat 1014.900 kb on + strand, within MPMX26_00965at 1015.133 kb on + strand, within MPMX26_00965at 1015.160 kb on + strand, within MPMX26_00965at 1015.217 kb on + strand, within MPMX26_00965at 1015.308 kb on + strandat 1015.314 kb on + strandat 1015.668 kb on + strand, within MPMX26_00966

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,013,284 + MPMX26_00963 0.40 +0.3
1,013,300 + MPMX26_00963 0.41 -0.3
1,013,310 + MPMX26_00963 0.41 -1.2
1,013,310 + MPMX26_00963 0.41 -0.3
1,013,310 + MPMX26_00963 0.41 -0.2
1,013,320 + MPMX26_00963 0.42 -0.8
1,013,381 + MPMX26_00963 0.46 +0.2
1,013,381 + MPMX26_00963 0.46 +0.8
1,013,386 + MPMX26_00963 0.46 +0.3
1,013,391 + MPMX26_00963 0.47 +0.5
1,013,396 + MPMX26_00963 0.47 +0.0
1,013,401 + MPMX26_00963 0.47 -0.7
1,013,401 + MPMX26_00963 0.47 +0.1
1,013,401 + MPMX26_00963 0.47 -2.4
1,013,401 + MPMX26_00963 0.47 +0.5
1,013,401 + MPMX26_00963 0.47 -0.4
1,013,406 + MPMX26_00963 0.48 -0.1
1,013,406 + MPMX26_00963 0.48 -0.1
1,013,406 + MPMX26_00963 0.48 +0.2
1,013,406 + MPMX26_00963 0.48 +0.1
1,013,406 + MPMX26_00963 0.48 -0.5
1,013,425 + MPMX26_00963 0.49 +2.1
1,013,456 + MPMX26_00963 0.51 +0.7
1,013,499 + MPMX26_00963 0.54 +0.1
1,013,499 + MPMX26_00963 0.54 +0.1
1,013,499 + MPMX26_00963 0.54 -1.2
1,013,604 + MPMX26_00963 0.61 -0.3
1,013,604 + MPMX26_00963 0.61 -0.7
1,013,604 + MPMX26_00963 0.61 +0.3
1,013,604 + MPMX26_00963 0.61 -0.2
1,013,604 + MPMX26_00963 0.61 +0.0
1,013,604 + MPMX26_00963 0.61 -0.2
1,013,604 + MPMX26_00963 0.61 -0.5
1,013,604 + MPMX26_00963 0.61 +0.2
1,013,621 + MPMX26_00963 0.62 -0.7
1,013,667 + MPMX26_00963 0.65 -0.2
1,013,667 + MPMX26_00963 0.65 +0.1
1,013,667 + MPMX26_00963 0.65 -0.8
1,013,667 + MPMX26_00963 0.65 -1.3
1,013,667 + MPMX26_00963 0.65 +1.0
1,013,667 + MPMX26_00963 0.65 +0.2
1,013,667 + MPMX26_00963 0.65 -0.1
1,013,680 + MPMX26_00963 0.66 +0.8
1,013,693 + MPMX26_00963 0.67 -0.0
1,013,729 + MPMX26_00963 0.70 -1.1
1,013,734 + MPMX26_00963 0.70 +0.4
1,013,822 + MPMX26_00963 0.76 -0.8
1,013,839 + MPMX26_00963 0.77 +0.8
1,013,848 + MPMX26_00963 0.78 -0.6
1,013,849 + MPMX26_00963 0.78 +0.9
1,013,849 + MPMX26_00963 0.78 +0.6
1,013,849 + MPMX26_00963 0.78 +0.2
1,013,849 + MPMX26_00963 0.78 +0.2
1,013,849 + MPMX26_00963 0.78 -0.2
1,013,849 + MPMX26_00963 0.78 +0.4
1,013,849 + MPMX26_00963 0.78 -0.2
1,013,849 + MPMX26_00963 0.78 +1.0
1,013,867 + MPMX26_00963 0.79 -0.1
1,013,914 + MPMX26_00963 0.82 +0.7
1,013,922 + MPMX26_00963 0.83 +1.8
1,013,922 + MPMX26_00963 0.83 -0.4
1,013,971 + MPMX26_00963 0.86 +1.0
1,013,985 + MPMX26_00963 0.87 +0.4
1,014,083 + +0.2
1,014,083 + -0.8
1,014,083 + -0.0
1,014,156 + +1.3
1,014,156 + -0.6
1,014,161 + -0.1
1,014,293 + MPMX26_00964 0.12 +0.2
1,014,295 + MPMX26_00964 0.13 -0.7
1,014,295 + MPMX26_00964 0.13 -0.8
1,014,306 + MPMX26_00964 0.15 -0.6
1,014,313 + MPMX26_00964 0.16 -0.6
1,014,319 + MPMX26_00964 0.18 -0.3
1,014,329 + MPMX26_00964 0.20 -0.1
1,014,343 + MPMX26_00964 0.22 -0.7
1,014,343 + MPMX26_00964 0.22 -0.5
1,014,343 + MPMX26_00964 0.22 -0.6
1,014,343 + MPMX26_00964 0.22 +0.8
1,014,366 + MPMX26_00964 0.27 -0.8
1,014,366 + MPMX26_00964 0.27 +1.4
1,014,366 + MPMX26_00964 0.27 -0.3
1,014,366 + MPMX26_00964 0.27 -0.2
1,014,366 + MPMX26_00964 0.27 -1.0
1,014,366 + MPMX26_00964 0.27 -0.4
1,014,366 + MPMX26_00964 0.27 +0.5
1,014,390 + MPMX26_00964 0.32 -0.5
1,014,390 + MPMX26_00964 0.32 -0.2
1,014,390 + MPMX26_00964 0.32 +0.1
1,014,404 + MPMX26_00964 0.35 -0.4
1,014,466 + MPMX26_00964 0.47 +0.4
1,014,467 + MPMX26_00964 0.47 -0.1
1,014,467 + MPMX26_00964 0.47 +0.5
1,014,467 + MPMX26_00964 0.47 +0.7
1,014,479 + MPMX26_00964 0.49 +1.2
1,014,505 + MPMX26_00964 0.55 +0.1
1,014,567 + MPMX26_00964 0.67 +0.6
1,014,567 + MPMX26_00964 0.67 -1.3
1,014,567 + MPMX26_00964 0.67 +0.4
1,014,567 + MPMX26_00964 0.67 +0.8
1,014,567 + MPMX26_00964 0.67 +0.4
1,014,567 + MPMX26_00964 0.67 -0.4
1,014,579 + MPMX26_00964 0.69 +0.3
1,014,602 + MPMX26_00964 0.74 -0.4
1,014,641 + MPMX26_00964 0.82 -0.3
1,014,642 + MPMX26_00964 0.82 -0.8
1,014,656 + MPMX26_00964 0.85 -0.8
1,014,658 + MPMX26_00964 0.85 -0.1
1,014,683 + +0.7
1,014,718 + +0.1
1,014,718 + +0.4
1,014,728 + -2.3
1,014,728 + -0.4
1,014,728 + +1.5
1,014,747 + -0.4
1,014,747 + -0.7
1,014,752 + -0.8
1,014,752 + -1.2
1,014,752 + +0.9
1,014,752 + -0.1
1,014,752 + +0.2
1,014,752 + +0.1
1,014,752 + -0.4
1,014,752 + -0.2
1,014,752 + +0.2
1,014,900 + MPMX26_00965 0.18 +0.8
1,015,133 + MPMX26_00965 0.67 +1.2
1,015,160 + MPMX26_00965 0.73 +0.4
1,015,217 + MPMX26_00965 0.85 +0.2
1,015,308 + -0.0
1,015,314 + +0.0
1,015,668 + MPMX26_00966 0.20 +0.2

Or see this region's nucleotide sequence