Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00439

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00438 and MPMX26_00439 are separated by 154 nucleotidesMPMX26_00439 and MPMX26_00440 are separated by 18 nucleotides MPMX26_00438: MPMX26_00438 - Queuine tRNA-ribosyltransferase, at 470,353 to 471,483 _00438 MPMX26_00439: MPMX26_00439 - Protein LemA, at 471,638 to 472,207 _00439 MPMX26_00440: MPMX26_00440 - hypothetical protein, at 472,226 to 473,257 _00440 Position (kb) 471 472 473Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 470.685 kb on - strand, within MPMX26_00438at 470.687 kb on - strand, within MPMX26_00438at 470.687 kb on - strand, within MPMX26_00438at 470.687 kb on - strand, within MPMX26_00438at 470.687 kb on - strand, within MPMX26_00438at 470.687 kb on - strand, within MPMX26_00438at 470.687 kb on - strand, within MPMX26_00438at 470.695 kb on - strand, within MPMX26_00438at 470.697 kb on - strand, within MPMX26_00438at 470.756 kb on - strand, within MPMX26_00438at 470.756 kb on - strand, within MPMX26_00438at 470.802 kb on - strand, within MPMX26_00438at 470.834 kb on - strand, within MPMX26_00438at 470.886 kb on - strand, within MPMX26_00438at 470.920 kb on - strand, within MPMX26_00438at 470.930 kb on - strand, within MPMX26_00438at 470.930 kb on - strand, within MPMX26_00438at 470.930 kb on - strand, within MPMX26_00438at 470.930 kb on - strand, within MPMX26_00438at 470.935 kb on - strand, within MPMX26_00438at 470.935 kb on - strand, within MPMX26_00438at 470.958 kb on - strand, within MPMX26_00438at 470.958 kb on - strand, within MPMX26_00438at 470.958 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 470.990 kb on - strand, within MPMX26_00438at 471.000 kb on - strand, within MPMX26_00438at 471.000 kb on - strand, within MPMX26_00438at 471.001 kb on - strand, within MPMX26_00438at 471.001 kb on - strand, within MPMX26_00438at 471.001 kb on - strand, within MPMX26_00438at 471.001 kb on - strand, within MPMX26_00438at 471.046 kb on - strand, within MPMX26_00438at 471.047 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.052 kb on - strand, within MPMX26_00438at 471.087 kb on - strand, within MPMX26_00438at 471.087 kb on - strand, within MPMX26_00438at 471.087 kb on - strand, within MPMX26_00438at 471.087 kb on - strand, within MPMX26_00438at 471.116 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.144 kb on - strand, within MPMX26_00438at 471.238 kb on - strand, within MPMX26_00438at 471.238 kb on - strand, within MPMX26_00438at 471.288 kb on - strand, within MPMX26_00438at 471.288 kb on - strand, within MPMX26_00438at 471.288 kb on - strand, within MPMX26_00438at 471.288 kb on - strand, within MPMX26_00438at 471.293 kb on - strand, within MPMX26_00438at 471.361 kb on - strand, within MPMX26_00438at 471.367 kb on - strand, within MPMX26_00438at 471.372 kb on - strandat 471.372 kb on - strandat 471.372 kb on - strandat 471.382 kb on - strandat 471.382 kb on - strandat 471.391 kb on - strandat 471.400 kb on - strandat 471.405 kb on - strandat 471.415 kb on - strandat 471.415 kb on - strandat 471.431 kb on - strandat 471.456 kb on - strandat 471.460 kb on - strandat 471.460 kb on - strandat 471.460 kb on - strandat 471.486 kb on - strandat 471.486 kb on - strandat 471.486 kb on - strandat 471.678 kb on - strandat 471.678 kb on - strandat 471.678 kb on - strandat 471.678 kb on - strandat 471.678 kb on - strandat 471.678 kb on - strandat 471.678 kb on - strandat 471.719 kb on - strand, within MPMX26_00439at 471.774 kb on - strand, within MPMX26_00439at 471.865 kb on - strand, within MPMX26_00439at 471.878 kb on - strand, within MPMX26_00439at 471.915 kb on - strand, within MPMX26_00439at 471.954 kb on - strand, within MPMX26_00439at 472.063 kb on - strand, within MPMX26_00439at 472.086 kb on - strand, within MPMX26_00439at 472.086 kb on - strand, within MPMX26_00439at 472.086 kb on - strand, within MPMX26_00439at 472.096 kb on - strand, within MPMX26_00439at 472.106 kb on - strand, within MPMX26_00439at 472.117 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.124 kb on - strand, within MPMX26_00439at 472.142 kb on - strand, within MPMX26_00439at 472.171 kb on - strandat 472.192 kb on + strandat 472.253 kb on - strandat 472.292 kb on - strandat 472.292 kb on - strandat 472.313 kb on - strandat 472.384 kb on - strand, within MPMX26_00440at 472.432 kb on - strand, within MPMX26_00440at 472.469 kb on - strand, within MPMX26_00440at 472.488 kb on - strand, within MPMX26_00440at 472.488 kb on - strand, within MPMX26_00440at 472.488 kb on - strand, within MPMX26_00440at 472.488 kb on - strand, within MPMX26_00440at 472.522 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.532 kb on - strand, within MPMX26_00440at 472.539 kb on + strand, within MPMX26_00440at 472.547 kb on - strand, within MPMX26_00440at 472.547 kb on - strand, within MPMX26_00440at 472.547 kb on - strand, within MPMX26_00440at 472.547 kb on - strand, within MPMX26_00440at 472.549 kb on - strand, within MPMX26_00440at 472.549 kb on - strand, within MPMX26_00440at 472.552 kb on - strand, within MPMX26_00440at 472.583 kb on - strand, within MPMX26_00440at 472.729 kb on - strand, within MPMX26_00440at 472.738 kb on - strand, within MPMX26_00440at 472.762 kb on - strand, within MPMX26_00440at 473.123 kb on - strand, within MPMX26_00440at 473.123 kb on - strand, within MPMX26_00440at 473.159 kb on - strandat 473.159 kb on - strandat 473.180 kb on - strandat 473.180 kb on - strandat 473.195 kb on - strandat 473.200 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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470,685 - MPMX26_00438 0.29 -0.5
470,687 - MPMX26_00438 0.30 +0.3
470,687 - MPMX26_00438 0.30 -0.3
470,687 - MPMX26_00438 0.30 -2.7
470,687 - MPMX26_00438 0.30 -1.2
470,687 - MPMX26_00438 0.30 -0.2
470,687 - MPMX26_00438 0.30 -1.7
470,695 - MPMX26_00438 0.30 -2.7
470,697 - MPMX26_00438 0.30 -1.5
470,756 - MPMX26_00438 0.36 -1.9
470,756 - MPMX26_00438 0.36 -0.7
470,802 - MPMX26_00438 0.40 -2.1
470,834 - MPMX26_00438 0.43 -0.5
470,886 - MPMX26_00438 0.47 -1.0
470,920 - MPMX26_00438 0.50 -1.0
470,930 - MPMX26_00438 0.51 -0.7
470,930 - MPMX26_00438 0.51 -0.7
470,930 - MPMX26_00438 0.51 +0.0
470,930 - MPMX26_00438 0.51 -0.5
470,935 - MPMX26_00438 0.51 -1.5
470,935 - MPMX26_00438 0.51 -1.2
470,958 - MPMX26_00438 0.53 +0.1
470,958 - MPMX26_00438 0.53 +0.3
470,958 - MPMX26_00438 0.53 -0.7
470,990 - MPMX26_00438 0.56 +0.3
470,990 - MPMX26_00438 0.56 -1.4
470,990 - MPMX26_00438 0.56 -0.6
470,990 - MPMX26_00438 0.56 -0.4
470,990 - MPMX26_00438 0.56 -1.4
470,990 - MPMX26_00438 0.56 -0.3
470,990 - MPMX26_00438 0.56 +1.7
470,990 - MPMX26_00438 0.56 +0.2
471,000 - MPMX26_00438 0.57 -0.1
471,000 - MPMX26_00438 0.57 -3.3
471,001 - MPMX26_00438 0.57 -1.7
471,001 - MPMX26_00438 0.57 -1.1
471,001 - MPMX26_00438 0.57 +0.4
471,001 - MPMX26_00438 0.57 -1.0
471,046 - MPMX26_00438 0.61 -1.7
471,047 - MPMX26_00438 0.61 -1.4
471,052 - MPMX26_00438 0.62 -0.4
471,052 - MPMX26_00438 0.62 -1.5
471,052 - MPMX26_00438 0.62 -1.8
471,052 - MPMX26_00438 0.62 -2.5
471,052 - MPMX26_00438 0.62 -0.8
471,052 - MPMX26_00438 0.62 -2.3
471,052 - MPMX26_00438 0.62 -0.1
471,052 - MPMX26_00438 0.62 -1.5
471,087 - MPMX26_00438 0.65 -0.6
471,087 - MPMX26_00438 0.65 -0.3
471,087 - MPMX26_00438 0.65 -1.4
471,087 - MPMX26_00438 0.65 -0.6
471,116 - MPMX26_00438 0.67 -0.7
471,144 - MPMX26_00438 0.70 -0.8
471,144 - MPMX26_00438 0.70 -2.0
471,144 - MPMX26_00438 0.70 +0.1
471,144 - MPMX26_00438 0.70 -1.3
471,144 - MPMX26_00438 0.70 -1.3
471,144 - MPMX26_00438 0.70 -0.5
471,144 - MPMX26_00438 0.70 -0.8
471,144 - MPMX26_00438 0.70 -0.9
471,238 - MPMX26_00438 0.78 -0.8
471,238 - MPMX26_00438 0.78 +1.2
471,288 - MPMX26_00438 0.83 -0.6
471,288 - MPMX26_00438 0.83 -2.3
471,288 - MPMX26_00438 0.83 -1.4
471,288 - MPMX26_00438 0.83 +0.9
471,293 - MPMX26_00438 0.83 +0.4
471,361 - MPMX26_00438 0.89 -0.6
471,367 - MPMX26_00438 0.90 -0.9
471,372 - -2.0
471,372 - -0.4
471,372 - +0.7
471,382 - -2.0
471,382 - -1.3
471,391 - -0.1
471,400 - -0.9
471,405 - -0.2
471,415 - -0.7
471,415 - -0.9
471,431 - -0.1
471,456 - -0.4
471,460 - -2.7
471,460 - -2.5
471,460 - +0.2
471,486 - +0.2
471,486 - +0.2
471,486 - -0.4
471,678 - -1.6
471,678 - -0.7
471,678 - -0.1
471,678 - -2.5
471,678 - -0.5
471,678 - -0.7
471,678 - -1.5
471,719 - MPMX26_00439 0.14 -0.0
471,774 - MPMX26_00439 0.24 -0.7
471,865 - MPMX26_00439 0.40 +0.7
471,878 - MPMX26_00439 0.42 +0.2
471,915 - MPMX26_00439 0.49 +0.2
471,954 - MPMX26_00439 0.55 -0.1
472,063 - MPMX26_00439 0.75 +0.4
472,086 - MPMX26_00439 0.79 +2.7
472,086 - MPMX26_00439 0.79 -0.7
472,086 - MPMX26_00439 0.79 -0.9
472,096 - MPMX26_00439 0.80 +0.4
472,106 - MPMX26_00439 0.82 -1.1
472,117 - MPMX26_00439 0.84 +0.7
472,124 - MPMX26_00439 0.85 +0.4
472,124 - MPMX26_00439 0.85 +0.9
472,124 - MPMX26_00439 0.85 +0.1
472,124 - MPMX26_00439 0.85 -0.1
472,124 - MPMX26_00439 0.85 -0.5
472,124 - MPMX26_00439 0.85 +0.0
472,124 - MPMX26_00439 0.85 -0.5
472,124 - MPMX26_00439 0.85 +0.3
472,124 - MPMX26_00439 0.85 +0.3
472,142 - MPMX26_00439 0.88 +0.3
472,171 - +0.3
472,192 + -0.4
472,253 - -0.5
472,292 - -1.1
472,292 - -1.0
472,313 - -1.0
472,384 - MPMX26_00440 0.15 -0.1
472,432 - MPMX26_00440 0.20 -0.7
472,469 - MPMX26_00440 0.24 +2.0
472,488 - MPMX26_00440 0.25 +1.2
472,488 - MPMX26_00440 0.25 -1.0
472,488 - MPMX26_00440 0.25 +1.2
472,488 - MPMX26_00440 0.25 -0.2
472,522 - MPMX26_00440 0.29 +1.2
472,532 - MPMX26_00440 0.30 +0.3
472,532 - MPMX26_00440 0.30 +0.9
472,532 - MPMX26_00440 0.30 +0.2
472,532 - MPMX26_00440 0.30 +0.5
472,532 - MPMX26_00440 0.30 +1.2
472,532 - MPMX26_00440 0.30 +2.7
472,532 - MPMX26_00440 0.30 +0.1
472,532 - MPMX26_00440 0.30 -1.5
472,532 - MPMX26_00440 0.30 -0.1
472,532 - MPMX26_00440 0.30 +0.3
472,539 + MPMX26_00440 0.30 -0.6
472,547 - MPMX26_00440 0.31 +0.9
472,547 - MPMX26_00440 0.31 +0.3
472,547 - MPMX26_00440 0.31 +1.3
472,547 - MPMX26_00440 0.31 -0.4
472,549 - MPMX26_00440 0.31 +0.2
472,549 - MPMX26_00440 0.31 +1.0
472,552 - MPMX26_00440 0.32 +0.3
472,583 - MPMX26_00440 0.35 +0.6
472,729 - MPMX26_00440 0.49 +0.3
472,738 - MPMX26_00440 0.50 +0.2
472,762 - MPMX26_00440 0.52 -0.8
473,123 - MPMX26_00440 0.87 -0.2
473,123 - MPMX26_00440 0.87 -1.3
473,159 - -0.3
473,159 - +0.3
473,180 - -0.3
473,180 - +1.1
473,195 - -0.6
473,200 - +0.6

Or see this region's nucleotide sequence