Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00224

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00223 and MPMX26_00224 are separated by 92 nucleotidesMPMX26_00224 and MPMX26_00225 are separated by 225 nucleotides MPMX26_00223: MPMX26_00223 - hypothetical protein, at 239,802 to 240,551 _00223 MPMX26_00224: MPMX26_00224 - hypothetical protein, at 240,644 to 241,435 _00224 MPMX26_00225: MPMX26_00225 - 3-ketoacyl-CoA thiolase, at 241,661 to 242,833 _00225 Position (kb) 240 241 242Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 239.836 kb on + strandat 239.869 kb on + strandat 239.906 kb on + strand, within MPMX26_00223at 239.906 kb on + strand, within MPMX26_00223at 239.976 kb on - strand, within MPMX26_00223at 240.273 kb on + strand, within MPMX26_00223at 240.416 kb on + strand, within MPMX26_00223at 240.449 kb on + strand, within MPMX26_00223at 240.531 kb on + strandat 240.531 kb on + strandat 240.699 kb on - strandat 240.699 kb on - strandat 240.757 kb on - strand, within MPMX26_00224at 240.800 kb on - strand, within MPMX26_00224at 240.800 kb on - strand, within MPMX26_00224at 240.805 kb on - strand, within MPMX26_00224at 240.805 kb on - strand, within MPMX26_00224at 240.835 kb on - strand, within MPMX26_00224at 240.852 kb on - strand, within MPMX26_00224at 240.852 kb on - strand, within MPMX26_00224at 240.873 kb on - strand, within MPMX26_00224at 241.110 kb on - strand, within MPMX26_00224at 241.118 kb on - strand, within MPMX26_00224at 241.120 kb on - strand, within MPMX26_00224at 241.151 kb on - strand, within MPMX26_00224at 241.309 kb on - strand, within MPMX26_00224at 241.331 kb on - strand, within MPMX26_00224at 241.333 kb on - strand, within MPMX26_00224at 241.333 kb on - strand, within MPMX26_00224at 241.333 kb on - strand, within MPMX26_00224at 241.338 kb on - strand, within MPMX26_00224at 241.473 kb on - strandat 241.473 kb on - strandat 241.473 kb on - strandat 241.640 kb on - strandat 241.658 kb on + strandat 241.666 kb on - strandat 241.691 kb on - strandat 241.691 kb on - strandat 241.696 kb on - strandat 241.696 kb on - strandat 241.696 kb on - strandat 241.696 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.701 kb on - strandat 241.741 kb on + strandat 241.744 kb on - strandat 241.759 kb on - strandat 241.764 kb on - strandat 241.764 kb on - strandat 241.764 kb on - strandat 241.772 kb on - strandat 241.774 kb on - strandat 241.777 kb on + strandat 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.785 kb on - strand, within MPMX26_00225at 241.787 kb on + strand, within MPMX26_00225at 241.795 kb on - strand, within MPMX26_00225at 241.795 kb on - strand, within MPMX26_00225at 241.795 kb on - strand, within MPMX26_00225at 241.826 kb on - strand, within MPMX26_00225at 241.843 kb on - strand, within MPMX26_00225at 241.852 kb on + strand, within MPMX26_00225at 241.852 kb on + strand, within MPMX26_00225at 241.860 kb on + strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.860 kb on - strand, within MPMX26_00225at 241.861 kb on - strand, within MPMX26_00225at 241.868 kb on - strand, within MPMX26_00225at 241.870 kb on - strand, within MPMX26_00225at 241.871 kb on + strand, within MPMX26_00225at 241.879 kb on - strand, within MPMX26_00225at 241.879 kb on - strand, within MPMX26_00225at 241.911 kb on - strand, within MPMX26_00225at 241.951 kb on - strand, within MPMX26_00225at 242.008 kb on - strand, within MPMX26_00225at 242.016 kb on - strand, within MPMX26_00225at 242.043 kb on - strand, within MPMX26_00225at 242.043 kb on - strand, within MPMX26_00225at 242.049 kb on - strand, within MPMX26_00225at 242.075 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.109 kb on - strand, within MPMX26_00225at 242.112 kb on - strand, within MPMX26_00225at 242.119 kb on - strand, within MPMX26_00225at 242.135 kb on - strand, within MPMX26_00225at 242.149 kb on - strand, within MPMX26_00225at 242.149 kb on - strand, within MPMX26_00225at 242.149 kb on - strand, within MPMX26_00225at 242.161 kb on - strand, within MPMX26_00225at 242.169 kb on - strand, within MPMX26_00225at 242.195 kb on - strand, within MPMX26_00225at 242.200 kb on - strand, within MPMX26_00225at 242.213 kb on - strand, within MPMX26_00225at 242.301 kb on - strand, within MPMX26_00225at 242.322 kb on - strand, within MPMX26_00225at 242.322 kb on - strand, within MPMX26_00225at 242.322 kb on - strand, within MPMX26_00225at 242.327 kb on - strand, within MPMX26_00225at 242.337 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.346 kb on - strand, within MPMX26_00225at 242.380 kb on - strand, within MPMX26_00225at 242.415 kb on - strand, within MPMX26_00225at 242.426 kb on - strand, within MPMX26_00225

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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239,836 + +1.3
239,869 + +0.4
239,906 + MPMX26_00223 0.14 +1.3
239,906 + MPMX26_00223 0.14 +0.7
239,976 - MPMX26_00223 0.23 +0.4
240,273 + MPMX26_00223 0.63 -0.6
240,416 + MPMX26_00223 0.82 -0.4
240,449 + MPMX26_00223 0.86 +0.6
240,531 + +1.2
240,531 + -0.7
240,699 - +0.4
240,699 - +2.2
240,757 - MPMX26_00224 0.14 -0.0
240,800 - MPMX26_00224 0.20 +2.4
240,800 - MPMX26_00224 0.20 +1.7
240,805 - MPMX26_00224 0.20 +0.2
240,805 - MPMX26_00224 0.20 +0.3
240,835 - MPMX26_00224 0.24 +1.3
240,852 - MPMX26_00224 0.26 +0.4
240,852 - MPMX26_00224 0.26 +0.6
240,873 - MPMX26_00224 0.29 +0.4
241,110 - MPMX26_00224 0.59 -0.4
241,118 - MPMX26_00224 0.60 +1.3
241,120 - MPMX26_00224 0.60 +0.3
241,151 - MPMX26_00224 0.64 -0.2
241,309 - MPMX26_00224 0.84 +1.7
241,331 - MPMX26_00224 0.87 +0.4
241,333 - MPMX26_00224 0.87 +2.3
241,333 - MPMX26_00224 0.87 -0.3
241,333 - MPMX26_00224 0.87 -0.1
241,338 - MPMX26_00224 0.88 -0.1
241,473 - +0.2
241,473 - +0.3
241,473 - -1.4
241,640 - +0.7
241,658 + +0.7
241,666 - -0.6
241,691 - -1.7
241,691 - -0.8
241,696 - +1.1
241,696 - -0.6
241,696 - -0.6
241,696 - -0.3
241,701 - +0.2
241,701 - -1.0
241,701 - -0.3
241,701 - -0.9
241,701 - -1.1
241,701 - -0.2
241,741 + -0.3
241,744 - -0.0
241,759 - -0.5
241,764 - -0.4
241,764 - +0.2
241,764 - -0.3
241,772 - -0.8
241,774 - -0.2
241,777 + +0.0
241,785 - MPMX26_00225 0.11 -0.6
241,785 - MPMX26_00225 0.11 -2.0
241,785 - MPMX26_00225 0.11 -2.8
241,785 - MPMX26_00225 0.11 -1.1
241,785 - MPMX26_00225 0.11 -0.2
241,785 - MPMX26_00225 0.11 +0.0
241,785 - MPMX26_00225 0.11 +0.3
241,785 - MPMX26_00225 0.11 -2.6
241,785 - MPMX26_00225 0.11 -0.1
241,785 - MPMX26_00225 0.11 -0.3
241,785 - MPMX26_00225 0.11 -0.3
241,785 - MPMX26_00225 0.11 -0.7
241,785 - MPMX26_00225 0.11 -0.9
241,785 - MPMX26_00225 0.11 -0.8
241,787 + MPMX26_00225 0.11 -2.2
241,795 - MPMX26_00225 0.11 -2.2
241,795 - MPMX26_00225 0.11 -0.8
241,795 - MPMX26_00225 0.11 -2.3
241,826 - MPMX26_00225 0.14 -0.6
241,843 - MPMX26_00225 0.16 -0.7
241,852 + MPMX26_00225 0.16 +0.0
241,852 + MPMX26_00225 0.16 -0.4
241,860 + MPMX26_00225 0.17 +0.6
241,860 - MPMX26_00225 0.17 -0.1
241,860 - MPMX26_00225 0.17 -0.5
241,860 - MPMX26_00225 0.17 -1.3
241,860 - MPMX26_00225 0.17 -0.6
241,860 - MPMX26_00225 0.17 +0.7
241,860 - MPMX26_00225 0.17 +1.2
241,861 - MPMX26_00225 0.17 -0.2
241,868 - MPMX26_00225 0.18 +1.0
241,870 - MPMX26_00225 0.18 -0.9
241,871 + MPMX26_00225 0.18 +0.2
241,879 - MPMX26_00225 0.19 -0.1
241,879 - MPMX26_00225 0.19 -1.4
241,911 - MPMX26_00225 0.21 -0.5
241,951 - MPMX26_00225 0.25 -0.8
242,008 - MPMX26_00225 0.30 -1.0
242,016 - MPMX26_00225 0.30 -0.9
242,043 - MPMX26_00225 0.33 -0.4
242,043 - MPMX26_00225 0.33 +0.3
242,049 - MPMX26_00225 0.33 -1.7
242,075 - MPMX26_00225 0.35 -0.7
242,109 - MPMX26_00225 0.38 +0.2
242,109 - MPMX26_00225 0.38 +0.0
242,109 - MPMX26_00225 0.38 -0.7
242,109 - MPMX26_00225 0.38 -0.5
242,112 - MPMX26_00225 0.38 -0.6
242,119 - MPMX26_00225 0.39 -0.5
242,135 - MPMX26_00225 0.40 -1.3
242,149 - MPMX26_00225 0.42 +0.0
242,149 - MPMX26_00225 0.42 -0.1
242,149 - MPMX26_00225 0.42 -0.5
242,161 - MPMX26_00225 0.43 -1.5
242,169 - MPMX26_00225 0.43 -0.3
242,195 - MPMX26_00225 0.46 -0.6
242,200 - MPMX26_00225 0.46 -0.2
242,213 - MPMX26_00225 0.47 -0.7
242,301 - MPMX26_00225 0.55 -0.2
242,322 - MPMX26_00225 0.56 -0.3
242,322 - MPMX26_00225 0.56 -0.9
242,322 - MPMX26_00225 0.56 -0.6
242,327 - MPMX26_00225 0.57 +0.0
242,337 - MPMX26_00225 0.58 +0.5
242,346 - MPMX26_00225 0.58 +0.1
242,346 - MPMX26_00225 0.58 -1.8
242,346 - MPMX26_00225 0.58 -1.4
242,346 - MPMX26_00225 0.58 +1.2
242,380 - MPMX26_00225 0.61 -0.9
242,415 - MPMX26_00225 0.64 +0.6
242,426 - MPMX26_00225 0.65 +0.7

Or see this region's nucleotide sequence