Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00055

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00054 and MPMX26_00055 are separated by 3 nucleotidesMPMX26_00055 and MPMX26_00056 overlap by 4 nucleotides MPMX26_00054: MPMX26_00054 - N(5)-(carboxyethyl)ornithine synthase, at 59,487 to 60,440 _00054 MPMX26_00055: MPMX26_00055 - hypothetical protein, at 60,444 to 61,571 _00055 MPMX26_00056: MPMX26_00056 - Putative glycosyltransferase EpsF, at 61,568 to 62,689 _00056 Position (kb) 60 61 62Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 59.538 kb on + strandat 59.623 kb on + strand, within MPMX26_00054at 59.625 kb on + strand, within MPMX26_00054at 59.628 kb on + strand, within MPMX26_00054at 59.634 kb on + strand, within MPMX26_00054at 59.817 kb on + strand, within MPMX26_00054at 59.817 kb on + strand, within MPMX26_00054at 59.898 kb on + strand, within MPMX26_00054at 59.903 kb on + strand, within MPMX26_00054at 59.903 kb on + strand, within MPMX26_00054at 59.903 kb on + strand, within MPMX26_00054at 59.903 kb on + strand, within MPMX26_00054at 59.903 kb on + strand, within MPMX26_00054at 59.903 kb on + strand, within MPMX26_00054at 59.904 kb on + strand, within MPMX26_00054at 59.913 kb on + strand, within MPMX26_00054at 59.919 kb on + strand, within MPMX26_00054at 59.920 kb on + strand, within MPMX26_00054at 60.009 kb on + strand, within MPMX26_00054at 60.009 kb on + strand, within MPMX26_00054at 60.009 kb on + strand, within MPMX26_00054at 60.016 kb on + strand, within MPMX26_00054at 60.016 kb on + strand, within MPMX26_00054at 60.065 kb on + strand, within MPMX26_00054at 60.092 kb on + strand, within MPMX26_00054at 60.195 kb on + strand, within MPMX26_00054at 60.195 kb on + strand, within MPMX26_00054at 60.216 kb on + strand, within MPMX26_00054at 60.216 kb on + strand, within MPMX26_00054at 60.242 kb on + strand, within MPMX26_00054at 60.247 kb on + strand, within MPMX26_00054at 60.266 kb on + strand, within MPMX26_00054at 60.331 kb on + strand, within MPMX26_00054at 60.387 kb on + strandat 60.403 kb on + strandat 60.435 kb on + strandat 60.435 kb on + strandat 60.475 kb on + strandat 60.475 kb on + strandat 60.610 kb on + strand, within MPMX26_00055at 60.611 kb on + strand, within MPMX26_00055at 60.620 kb on + strand, within MPMX26_00055at 60.635 kb on + strand, within MPMX26_00055at 60.651 kb on + strand, within MPMX26_00055at 60.655 kb on + strand, within MPMX26_00055at 60.655 kb on + strand, within MPMX26_00055at 60.655 kb on + strand, within MPMX26_00055at 60.673 kb on - strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.734 kb on + strand, within MPMX26_00055at 60.748 kb on + strand, within MPMX26_00055at 60.748 kb on + strand, within MPMX26_00055at 60.798 kb on + strand, within MPMX26_00055at 60.807 kb on + strand, within MPMX26_00055at 60.808 kb on + strand, within MPMX26_00055at 60.901 kb on + strand, within MPMX26_00055at 60.918 kb on + strand, within MPMX26_00055at 60.918 kb on + strand, within MPMX26_00055at 60.971 kb on + strand, within MPMX26_00055at 61.052 kb on + strand, within MPMX26_00055at 61.112 kb on + strand, within MPMX26_00055at 61.185 kb on + strand, within MPMX26_00055at 61.435 kb on + strand, within MPMX26_00055at 61.438 kb on + strand, within MPMX26_00055at 61.438 kb on + strand, within MPMX26_00055at 61.537 kb on + strandat 61.537 kb on + strandat 61.537 kb on + strandat 61.596 kb on + strandat 61.691 kb on + strand, within MPMX26_00056at 61.711 kb on + strand, within MPMX26_00056at 61.826 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.928 kb on - strand, within MPMX26_00056at 61.947 kb on + strand, within MPMX26_00056at 61.997 kb on + strand, within MPMX26_00056at 61.997 kb on + strand, within MPMX26_00056at 62.007 kb on + strand, within MPMX26_00056at 62.046 kb on + strand, within MPMX26_00056at 62.082 kb on + strand, within MPMX26_00056at 62.082 kb on + strand, within MPMX26_00056at 62.170 kb on + strand, within MPMX26_00056at 62.237 kb on + strand, within MPMX26_00056at 62.288 kb on + strand, within MPMX26_00056at 62.379 kb on + strand, within MPMX26_00056at 62.422 kb on + strand, within MPMX26_00056at 62.452 kb on + strand, within MPMX26_00056at 62.454 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.482 kb on + strand, within MPMX26_00056

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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59,538 + -1.0
59,623 + MPMX26_00054 0.14 -0.9
59,625 + MPMX26_00054 0.14 +0.7
59,628 + MPMX26_00054 0.15 -2.8
59,634 + MPMX26_00054 0.15 +0.7
59,817 + MPMX26_00054 0.35 -0.1
59,817 + MPMX26_00054 0.35 +0.1
59,898 + MPMX26_00054 0.43 -2.2
59,903 + MPMX26_00054 0.44 -1.4
59,903 + MPMX26_00054 0.44 -1.3
59,903 + MPMX26_00054 0.44 -2.0
59,903 + MPMX26_00054 0.44 -1.9
59,903 + MPMX26_00054 0.44 -0.7
59,903 + MPMX26_00054 0.44 -0.6
59,904 + MPMX26_00054 0.44 +2.7
59,913 + MPMX26_00054 0.45 -3.1
59,919 + MPMX26_00054 0.45 -1.4
59,920 + MPMX26_00054 0.45 +0.7
60,009 + MPMX26_00054 0.55 -0.4
60,009 + MPMX26_00054 0.55 -0.3
60,009 + MPMX26_00054 0.55 -0.3
60,016 + MPMX26_00054 0.55 -1.1
60,016 + MPMX26_00054 0.55 -1.3
60,065 + MPMX26_00054 0.61 -0.3
60,092 + MPMX26_00054 0.63 -2.1
60,195 + MPMX26_00054 0.74 +0.7
60,195 + MPMX26_00054 0.74 -0.7
60,216 + MPMX26_00054 0.76 -0.1
60,216 + MPMX26_00054 0.76 -2.0
60,242 + MPMX26_00054 0.79 -0.2
60,247 + MPMX26_00054 0.80 -1.4
60,266 + MPMX26_00054 0.82 +0.7
60,331 + MPMX26_00054 0.88 -1.7
60,387 + -1.6
60,403 + +0.2
60,435 + -0.4
60,435 + -2.4
60,475 + -0.9
60,475 + -0.9
60,610 + MPMX26_00055 0.15 -0.4
60,611 + MPMX26_00055 0.15 -2.2
60,620 + MPMX26_00055 0.16 -0.6
60,635 + MPMX26_00055 0.17 +0.4
60,651 + MPMX26_00055 0.18 -0.7
60,655 + MPMX26_00055 0.19 -0.1
60,655 + MPMX26_00055 0.19 -0.2
60,655 + MPMX26_00055 0.19 +0.1
60,673 - MPMX26_00055 0.20 -1.4
60,734 + MPMX26_00055 0.26 -0.9
60,734 + MPMX26_00055 0.26 +0.1
60,734 + MPMX26_00055 0.26 +0.7
60,734 + MPMX26_00055 0.26 -0.7
60,734 + MPMX26_00055 0.26 -0.6
60,734 + MPMX26_00055 0.26 -1.1
60,734 + MPMX26_00055 0.26 -2.6
60,734 + MPMX26_00055 0.26 +0.7
60,734 + MPMX26_00055 0.26 -0.9
60,748 + MPMX26_00055 0.27 -0.3
60,748 + MPMX26_00055 0.27 -0.3
60,798 + MPMX26_00055 0.31 -1.4
60,807 + MPMX26_00055 0.32 -2.0
60,808 + MPMX26_00055 0.32 -2.1
60,901 + MPMX26_00055 0.41 +0.4
60,918 + MPMX26_00055 0.42 +0.7
60,918 + MPMX26_00055 0.42 -0.7
60,971 + MPMX26_00055 0.47 -0.2
61,052 + MPMX26_00055 0.54 -0.3
61,112 + MPMX26_00055 0.59 -1.5
61,185 + MPMX26_00055 0.66 +0.7
61,435 + MPMX26_00055 0.88 +0.4
61,438 + MPMX26_00055 0.88 -0.3
61,438 + MPMX26_00055 0.88 -1.0
61,537 + -0.4
61,537 + +0.7
61,537 + +0.3
61,596 + -2.7
61,691 + MPMX26_00056 0.11 -1.0
61,711 + MPMX26_00056 0.13 -0.9
61,826 + MPMX26_00056 0.23 -1.5
61,920 + MPMX26_00056 0.31 -1.7
61,920 + MPMX26_00056 0.31 -2.0
61,920 + MPMX26_00056 0.31 -1.8
61,920 + MPMX26_00056 0.31 -2.2
61,928 - MPMX26_00056 0.32 -1.9
61,947 + MPMX26_00056 0.34 -1.5
61,997 + MPMX26_00056 0.38 -1.7
61,997 + MPMX26_00056 0.38 +0.1
62,007 + MPMX26_00056 0.39 -1.3
62,046 + MPMX26_00056 0.43 -1.9
62,082 + MPMX26_00056 0.46 -1.0
62,082 + MPMX26_00056 0.46 -1.7
62,170 + MPMX26_00056 0.54 -2.7
62,237 + MPMX26_00056 0.60 -2.4
62,288 + MPMX26_00056 0.64 -1.5
62,379 + MPMX26_00056 0.72 -2.3
62,422 + MPMX26_00056 0.76 -1.3
62,452 + MPMX26_00056 0.79 +0.9
62,454 + MPMX26_00056 0.79 -0.2
62,475 + MPMX26_00056 0.81 -0.3
62,475 + MPMX26_00056 0.81 +0.6
62,475 + MPMX26_00056 0.81 -0.9
62,475 + MPMX26_00056 0.81 -0.3
62,482 + MPMX26_00056 0.81 -3.3

Or see this region's nucleotide sequence