Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15140 and A4249_RS15145 are separated by 83 nucleotides A4249_RS15145 and A4249_RS15150 are separated by 420 nucleotides A4249_RS15150 and A4249_RS15155 are separated by 255 nucleotides
A4249_RS15140: A4249_RS15140 - TraB/GumN family protein, at 3,059,814 to 3,060,776
_RS15140
A4249_RS15145: A4249_RS15145 - tRNA-Gly, at 3,060,860 to 3,060,934
_RS15145
A4249_RS15150: A4249_RS15150 - hypothetical protein, at 3,061,355 to 3,061,921
_RS15150
A4249_RS15155: A4249_RS15155 - hypothetical protein, at 3,062,177 to 3,062,956
_RS15155
Position (kb)
3061
3062 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3060.493 kb on - strand, within A4249_RS15140 at 3060.606 kb on + strand, within A4249_RS15140 at 3060.606 kb on + strand, within A4249_RS15140 at 3060.606 kb on + strand, within A4249_RS15140 at 3060.607 kb on - strand, within A4249_RS15140 at 3060.607 kb on - strand, within A4249_RS15140 at 3060.775 kb on - strand at 3060.808 kb on + strand at 3060.867 kb on + strand at 3060.868 kb on - strand, within A4249_RS15145 at 3060.868 kb on - strand, within A4249_RS15145 at 3060.868 kb on - strand, within A4249_RS15145 at 3060.868 kb on - strand, within A4249_RS15145 at 3060.878 kb on + strand, within A4249_RS15145 at 3060.878 kb on + strand, within A4249_RS15145 at 3060.879 kb on - strand, within A4249_RS15145 at 3060.879 kb on - strand, within A4249_RS15145 at 3060.879 kb on - strand, within A4249_RS15145 at 3060.879 kb on - strand, within A4249_RS15145 at 3060.879 kb on - strand, within A4249_RS15145 at 3060.879 kb on - strand, within A4249_RS15145 at 3060.947 kb on + strand at 3060.947 kb on + strand at 3060.947 kb on + strand at 3060.948 kb on - strand at 3060.948 kb on - strand at 3061.027 kb on + strand at 3061.047 kb on + strand at 3061.048 kb on - strand at 3061.048 kb on - strand at 3061.048 kb on - strand at 3061.194 kb on + strand at 3061.195 kb on - strand at 3061.195 kb on - strand at 3061.195 kb on - strand at 3061.207 kb on - strand at 3061.207 kb on - strand at 3061.212 kb on + strand at 3061.399 kb on - strand at 3061.703 kb on + strand, within A4249_RS15150 at 3061.704 kb on - strand, within A4249_RS15150 at 3061.704 kb on - strand, within A4249_RS15150 at 3061.704 kb on - strand, within A4249_RS15150 at 3061.880 kb on + strand at 3062.255 kb on + strand, within A4249_RS15155 at 3062.288 kb on + strand, within A4249_RS15155 at 3062.288 kb on + strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.339 kb on - strand, within A4249_RS15155 at 3062.339 kb on - strand, within A4249_RS15155 at 3062.339 kb on - strand, within A4249_RS15155 at 3062.378 kb on - strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.500 kb on + strand, within A4249_RS15155
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 3,060,493 - A4249_RS15140 0.71 +1.5 3,060,606 + A4249_RS15140 0.82 +3.0 3,060,606 + A4249_RS15140 0.82 -1.3 3,060,606 + A4249_RS15140 0.82 +2.1 3,060,607 - A4249_RS15140 0.82 +0.2 3,060,607 - A4249_RS15140 0.82 +1.1 3,060,775 - +1.2 3,060,808 + +0.9 3,060,867 + -1.5 3,060,868 - A4249_RS15145 0.11 -0.2 3,060,868 - A4249_RS15145 0.11 -1.2 3,060,868 - A4249_RS15145 0.11 -0.0 3,060,868 - A4249_RS15145 0.11 -0.7 3,060,878 + A4249_RS15145 0.24 -0.2 3,060,878 + A4249_RS15145 0.24 +0.8 3,060,879 - A4249_RS15145 0.25 +0.5 3,060,879 - A4249_RS15145 0.25 +0.3 3,060,879 - A4249_RS15145 0.25 +0.7 3,060,879 - A4249_RS15145 0.25 +0.0 3,060,879 - A4249_RS15145 0.25 +1.1 3,060,879 - A4249_RS15145 0.25 -1.0 3,060,947 + -0.7 3,060,947 + -0.2 3,060,947 + -1.6 3,060,948 - +0.2 3,060,948 - -2.5 3,061,027 + -0.6 3,061,047 + -1.6 3,061,048 - -0.4 3,061,048 - +0.6 3,061,048 - +0.1 3,061,194 + -0.7 3,061,195 - -0.7 3,061,195 - +0.2 3,061,195 - +0.1 3,061,207 - -1.2 3,061,207 - -0.7 3,061,212 + +2.2 3,061,399 - -1.0 3,061,703 + A4249_RS15150 0.61 -0.1 3,061,704 - A4249_RS15150 0.62 -1.5 3,061,704 - A4249_RS15150 0.62 -0.7 3,061,704 - A4249_RS15150 0.62 -0.7 3,061,880 + -2.3 3,062,255 + A4249_RS15155 0.10 -1.1 3,062,288 + A4249_RS15155 0.14 +0.8 3,062,288 + A4249_RS15155 0.14 -0.4 3,062,289 - A4249_RS15155 0.14 -0.3 3,062,289 - A4249_RS15155 0.14 -0.3 3,062,289 - A4249_RS15155 0.14 +0.6 3,062,289 - A4249_RS15155 0.14 +0.4 3,062,289 - A4249_RS15155 0.14 -0.5 3,062,338 + A4249_RS15155 0.21 +0.7 3,062,338 + A4249_RS15155 0.21 +0.7 3,062,338 + A4249_RS15155 0.21 -1.8 3,062,338 + A4249_RS15155 0.21 -1.2 3,062,338 + A4249_RS15155 0.21 -1.1 3,062,339 - A4249_RS15155 0.21 -0.1 3,062,339 - A4249_RS15155 0.21 -0.4 3,062,339 - A4249_RS15155 0.21 -0.7 3,062,378 - A4249_RS15155 0.26 -1.1 3,062,386 + A4249_RS15155 0.27 +0.6 3,062,386 + A4249_RS15155 0.27 -0.5 3,062,386 + A4249_RS15155 0.27 +0.2 3,062,386 + A4249_RS15155 0.27 +0.2 3,062,387 - A4249_RS15155 0.27 -0.3 3,062,387 - A4249_RS15155 0.27 +0.2 3,062,387 - A4249_RS15155 0.27 +0.2 3,062,387 - A4249_RS15155 0.27 +0.6 3,062,500 + A4249_RS15155 0.41 +0.5
Or see this region's nucleotide sequence