Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14975 and A4249_RS14980 are separated by 47 nucleotides A4249_RS14980 and A4249_RS14985 overlap by 1 nucleotides A4249_RS14985 and A4249_RS14990 are separated by 71 nucleotides
A4249_RS14975: A4249_RS14975 - creatininase family protein, at 3,029,429 to 3,030,202
_RS14975
A4249_RS14980: A4249_RS14980 - TetR/AcrR family transcriptional regulator, at 3,030,250 to 3,030,867
_RS14980
A4249_RS14985: A4249_RS14985 - DHA2 family efflux MFS transporter permease subunit, at 3,030,867 to 3,032,402
_RS14985
A4249_RS14990: A4249_RS14990 - HlyD family secretion protein, at 3,032,474 to 3,033,559
_RS14990
Position (kb)
3030
3031
3032
3033 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3029.874 kb on + strand, within A4249_RS14975 at 3029.874 kb on + strand, within A4249_RS14975 at 3029.874 kb on + strand, within A4249_RS14975 at 3029.875 kb on - strand, within A4249_RS14975 at 3029.998 kb on + strand, within A4249_RS14975 at 3029.999 kb on - strand, within A4249_RS14975 at 3029.999 kb on - strand, within A4249_RS14975 at 3030.116 kb on + strand, within A4249_RS14975 at 3030.116 kb on + strand, within A4249_RS14975 at 3030.117 kb on - strand, within A4249_RS14975 at 3030.117 kb on - strand, within A4249_RS14975 at 3030.237 kb on + strand at 3030.238 kb on - strand at 3030.506 kb on + strand, within A4249_RS14980 at 3030.506 kb on + strand, within A4249_RS14980 at 3030.506 kb on + strand, within A4249_RS14980 at 3030.506 kb on + strand, within A4249_RS14980 at 3030.506 kb on + strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.507 kb on - strand, within A4249_RS14980 at 3030.663 kb on + strand, within A4249_RS14980 at 3030.724 kb on - strand, within A4249_RS14980 at 3030.725 kb on + strand, within A4249_RS14980 at 3030.725 kb on + strand, within A4249_RS14980 at 3030.725 kb on + strand, within A4249_RS14980 at 3030.725 kb on + strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3030.726 kb on - strand, within A4249_RS14980 at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.015 kb on + strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.016 kb on - strand at 3031.295 kb on + strand, within A4249_RS14985 at 3031.296 kb on - strand, within A4249_RS14985 at 3031.516 kb on + strand, within A4249_RS14985 at 3031.516 kb on + strand, within A4249_RS14985 at 3031.516 kb on + strand, within A4249_RS14985 at 3031.654 kb on + strand, within A4249_RS14985 at 3031.654 kb on + strand, within A4249_RS14985 at 3031.654 kb on + strand, within A4249_RS14985 at 3031.655 kb on - strand, within A4249_RS14985 at 3032.249 kb on - strand at 3032.249 kb on - strand at 3032.249 kb on - strand at 3032.249 kb on - strand at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.814 kb on + strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.815 kb on - strand, within A4249_RS14990 at 3032.865 kb on + strand, within A4249_RS14990 at 3032.865 kb on + strand, within A4249_RS14990 at 3032.865 kb on + strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.866 kb on - strand, within A4249_RS14990 at 3032.975 kb on + strand, within A4249_RS14990 at 3032.975 kb on + strand, within A4249_RS14990 at 3032.975 kb on + strand, within A4249_RS14990 at 3032.976 kb on - strand, within A4249_RS14990 at 3032.976 kb on - strand, within A4249_RS14990 at 3032.976 kb on - strand, within A4249_RS14990
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 3,029,874 + A4249_RS14975 0.57 +0.4 3,029,874 + A4249_RS14975 0.57 -1.8 3,029,874 + A4249_RS14975 0.57 +0.7 3,029,875 - A4249_RS14975 0.58 +0.2 3,029,998 + A4249_RS14975 0.74 +0.2 3,029,999 - A4249_RS14975 0.74 +0.0 3,029,999 - A4249_RS14975 0.74 +0.4 3,030,116 + A4249_RS14975 0.89 -0.8 3,030,116 + A4249_RS14975 0.89 +1.1 3,030,117 - A4249_RS14975 0.89 +1.1 3,030,117 - A4249_RS14975 0.89 -0.1 3,030,237 + -0.0 3,030,238 - +0.4 3,030,506 + A4249_RS14980 0.41 -0.3 3,030,506 + A4249_RS14980 0.41 +0.7 3,030,506 + A4249_RS14980 0.41 +1.0 3,030,506 + A4249_RS14980 0.41 +1.4 3,030,506 + A4249_RS14980 0.41 +0.7 3,030,507 - A4249_RS14980 0.42 +0.4 3,030,507 - A4249_RS14980 0.42 -1.0 3,030,507 - A4249_RS14980 0.42 +0.6 3,030,507 - A4249_RS14980 0.42 +0.7 3,030,507 - A4249_RS14980 0.42 +0.6 3,030,507 - A4249_RS14980 0.42 +0.4 3,030,507 - A4249_RS14980 0.42 -1.6 3,030,507 - A4249_RS14980 0.42 -0.1 3,030,663 + A4249_RS14980 0.67 -0.7 3,030,724 - A4249_RS14980 0.77 +0.5 3,030,725 + A4249_RS14980 0.77 +1.0 3,030,725 + A4249_RS14980 0.77 +0.4 3,030,725 + A4249_RS14980 0.77 +0.7 3,030,725 + A4249_RS14980 0.77 -1.7 3,030,726 - A4249_RS14980 0.77 +1.6 3,030,726 - A4249_RS14980 0.77 +0.9 3,030,726 - A4249_RS14980 0.77 +0.4 3,030,726 - A4249_RS14980 0.77 +0.9 3,030,726 - A4249_RS14980 0.77 +1.0 3,030,726 - A4249_RS14980 0.77 -0.1 3,030,726 - A4249_RS14980 0.77 +0.4 3,030,726 - A4249_RS14980 0.77 +2.1 3,031,015 + +1.4 3,031,015 + -1.1 3,031,015 + -0.7 3,031,015 + -0.3 3,031,015 + +0.4 3,031,015 + +0.4 3,031,015 + +0.5 3,031,015 + -0.2 3,031,015 + +0.1 3,031,015 + +0.4 3,031,015 + +0.7 3,031,015 + -0.6 3,031,015 + +0.2 3,031,015 + -0.7 3,031,015 + -0.5 3,031,016 - +0.7 3,031,016 - +0.7 3,031,016 - +0.9 3,031,016 - -0.5 3,031,016 - +0.4 3,031,016 - -0.7 3,031,016 - -0.1 3,031,016 - +0.9 3,031,016 - +1.3 3,031,016 - +0.1 3,031,295 + A4249_RS14985 0.28 -1.1 3,031,296 - A4249_RS14985 0.28 +0.1 3,031,516 + A4249_RS14985 0.42 -0.1 3,031,516 + A4249_RS14985 0.42 +1.0 3,031,516 + A4249_RS14985 0.42 -0.1 3,031,654 + A4249_RS14985 0.51 -0.3 3,031,654 + A4249_RS14985 0.51 +0.1 3,031,654 + A4249_RS14985 0.51 +0.1 3,031,655 - A4249_RS14985 0.51 -0.1 3,032,249 - +0.6 3,032,249 - -0.2 3,032,249 - +0.4 3,032,249 - +1.0 3,032,814 + A4249_RS14990 0.31 +0.9 3,032,814 + A4249_RS14990 0.31 +1.3 3,032,814 + A4249_RS14990 0.31 -0.3 3,032,814 + A4249_RS14990 0.31 -0.9 3,032,814 + A4249_RS14990 0.31 -0.2 3,032,814 + A4249_RS14990 0.31 -0.1 3,032,815 - A4249_RS14990 0.31 +0.8 3,032,815 - A4249_RS14990 0.31 +0.6 3,032,815 - A4249_RS14990 0.31 +0.2 3,032,815 - A4249_RS14990 0.31 +0.1 3,032,815 - A4249_RS14990 0.31 +0.1 3,032,815 - A4249_RS14990 0.31 -0.3 3,032,815 - A4249_RS14990 0.31 +0.9 3,032,815 - A4249_RS14990 0.31 +0.7 3,032,815 - A4249_RS14990 0.31 +0.6 3,032,815 - A4249_RS14990 0.31 -0.5 3,032,815 - A4249_RS14990 0.31 +0.1 3,032,815 - A4249_RS14990 0.31 +1.2 3,032,815 - A4249_RS14990 0.31 +0.0 3,032,865 + A4249_RS14990 0.36 -0.5 3,032,865 + A4249_RS14990 0.36 -1.0 3,032,865 + A4249_RS14990 0.36 +0.2 3,032,866 - A4249_RS14990 0.36 -1.0 3,032,866 - A4249_RS14990 0.36 +0.3 3,032,866 - A4249_RS14990 0.36 -0.5 3,032,866 - A4249_RS14990 0.36 +2.2 3,032,866 - A4249_RS14990 0.36 -1.1 3,032,866 - A4249_RS14990 0.36 -1.0 3,032,866 - A4249_RS14990 0.36 +0.9 3,032,866 - A4249_RS14990 0.36 -0.4 3,032,975 + A4249_RS14990 0.46 +0.5 3,032,975 + A4249_RS14990 0.46 -0.4 3,032,975 + A4249_RS14990 0.46 +0.7 3,032,976 - A4249_RS14990 0.46 -1.2 3,032,976 - A4249_RS14990 0.46 -0.7 3,032,976 - A4249_RS14990 0.46 +0.3
Or see this region's nucleotide sequence