Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14890 and A4249_RS14895 are separated by 79 nucleotides A4249_RS14895 and A4249_RS14900 overlap by 4 nucleotides A4249_RS14900 and A4249_RS14905 overlap by 4 nucleotides A4249_RS14905 and A4249_RS14910 are separated by 106 nucleotides
A4249_RS14890: A4249_RS14890 - substrate-binding domain-containing protein, at 3,013,242 to 3,014,309
_RS14890
A4249_RS14895: A4249_RS14895 - phosphonate ABC transporter, permease protein PhnE, at 3,014,389 to 3,015,201
_RS14895
A4249_RS14900: A4249_RS14900 - phosphate/phosphite/phosphonate ABC transporter substrate-binding protein, at 3,015,198 to 3,016,214
_RS14900
A4249_RS14905: A4249_RS14905 - phosphonate ABC transporter ATP-binding protein, at 3,016,211 to 3,017,020
_RS14905
A4249_RS14910: A4249_RS14910 - DUF2254 domain-containing protein, at 3,017,127 to 3,018,356
_RS14910
Position (kb)
3015
3016
3017 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3014.345 kb on + strand at 3014.345 kb on + strand at 3014.345 kb on + strand at 3014.345 kb on + strand at 3014.346 kb on - strand at 3014.346 kb on - strand at 3014.358 kb on + strand at 3014.358 kb on + strand at 3014.358 kb on + strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.359 kb on - strand at 3014.390 kb on + strand at 3014.390 kb on + strand at 3014.390 kb on + strand at 3014.579 kb on + strand, within A4249_RS14895 at 3014.794 kb on + strand, within A4249_RS14895 at 3014.795 kb on - strand, within A4249_RS14895 at 3015.089 kb on + strand, within A4249_RS14895 at 3015.089 kb on + strand, within A4249_RS14895 at 3015.089 kb on + strand, within A4249_RS14895 at 3015.089 kb on + strand, within A4249_RS14895 at 3015.090 kb on - strand, within A4249_RS14895 at 3015.090 kb on - strand, within A4249_RS14895 at 3015.090 kb on - strand, within A4249_RS14895 at 3015.090 kb on - strand, within A4249_RS14895 at 3015.331 kb on + strand, within A4249_RS14900 at 3015.331 kb on + strand, within A4249_RS14900 at 3015.331 kb on + strand, within A4249_RS14900 at 3015.331 kb on + strand, within A4249_RS14900 at 3015.331 kb on + strand, within A4249_RS14900 at 3015.332 kb on - strand, within A4249_RS14900 at 3015.332 kb on - strand, within A4249_RS14900 at 3015.332 kb on - strand, within A4249_RS14900 at 3015.362 kb on - strand, within A4249_RS14900 at 3015.421 kb on + strand, within A4249_RS14900 at 3015.421 kb on + strand, within A4249_RS14900 at 3015.421 kb on + strand, within A4249_RS14900 at 3015.421 kb on + strand, within A4249_RS14900 at 3015.422 kb on - strand, within A4249_RS14900 at 3015.422 kb on - strand, within A4249_RS14900 at 3015.422 kb on - strand, within A4249_RS14900 at 3015.754 kb on + strand, within A4249_RS14900 at 3015.754 kb on + strand, within A4249_RS14900 at 3015.754 kb on + strand, within A4249_RS14900 at 3015.755 kb on - strand, within A4249_RS14900 at 3015.755 kb on - strand, within A4249_RS14900 at 3015.826 kb on + strand, within A4249_RS14900 at 3015.826 kb on + strand, within A4249_RS14900 at 3015.826 kb on + strand, within A4249_RS14900 at 3015.826 kb on + strand, within A4249_RS14900 at 3015.826 kb on + strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.827 kb on - strand, within A4249_RS14900 at 3015.964 kb on + strand, within A4249_RS14900 at 3015.964 kb on + strand, within A4249_RS14900 at 3015.964 kb on + strand, within A4249_RS14900 at 3015.964 kb on + strand, within A4249_RS14900 at 3015.965 kb on - strand, within A4249_RS14900 at 3015.979 kb on + strand, within A4249_RS14900 at 3015.980 kb on - strand, within A4249_RS14900 at 3015.980 kb on - strand, within A4249_RS14900 at 3016.179 kb on + strand at 3016.179 kb on + strand at 3016.254 kb on + strand at 3016.255 kb on - strand at 3016.255 kb on - strand at 3016.302 kb on + strand, within A4249_RS14905 at 3016.302 kb on + strand, within A4249_RS14905 at 3016.303 kb on - strand, within A4249_RS14905 at 3016.345 kb on - strand, within A4249_RS14905 at 3016.497 kb on - strand, within A4249_RS14905 at 3016.497 kb on - strand, within A4249_RS14905 at 3016.566 kb on + strand, within A4249_RS14905 at 3016.635 kb on - strand, within A4249_RS14905 at 3016.635 kb on - strand, within A4249_RS14905 at 3016.985 kb on + strand at 3016.986 kb on - strand at 3017.030 kb on - strand at 3017.030 kb on - strand at 3017.037 kb on + strand at 3017.038 kb on - strand at 3017.058 kb on + strand at 3017.058 kb on + strand at 3017.059 kb on - strand at 3017.059 kb on - strand at 3017.086 kb on + strand at 3017.087 kb on - strand at 3017.087 kb on - strand at 3017.087 kb on - strand at 3017.161 kb on + strand at 3017.162 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 3,014,345 + -0.0 3,014,345 + +0.2 3,014,345 + -1.3 3,014,345 + +0.4 3,014,346 - -0.3 3,014,346 - +0.0 3,014,358 + +0.9 3,014,358 + +0.2 3,014,358 + +0.7 3,014,359 - +0.2 3,014,359 - -0.3 3,014,359 - +0.1 3,014,359 - +1.2 3,014,359 - -1.0 3,014,359 - -0.3 3,014,359 - -0.2 3,014,359 - -0.3 3,014,359 - -0.5 3,014,359 - -0.2 3,014,390 + -1.4 3,014,390 + +0.7 3,014,390 + +0.8 3,014,579 + A4249_RS14895 0.23 +0.2 3,014,794 + A4249_RS14895 0.50 -0.3 3,014,795 - A4249_RS14895 0.50 +1.2 3,015,089 + A4249_RS14895 0.86 +0.1 3,015,089 + A4249_RS14895 0.86 +1.2 3,015,089 + A4249_RS14895 0.86 -0.6 3,015,089 + A4249_RS14895 0.86 -0.3 3,015,090 - A4249_RS14895 0.86 +0.2 3,015,090 - A4249_RS14895 0.86 +0.7 3,015,090 - A4249_RS14895 0.86 +2.7 3,015,090 - A4249_RS14895 0.86 -1.2 3,015,331 + A4249_RS14900 0.13 +1.4 3,015,331 + A4249_RS14900 0.13 -0.2 3,015,331 + A4249_RS14900 0.13 +0.6 3,015,331 + A4249_RS14900 0.13 +1.8 3,015,331 + A4249_RS14900 0.13 +0.6 3,015,332 - A4249_RS14900 0.13 -0.1 3,015,332 - A4249_RS14900 0.13 -0.8 3,015,332 - A4249_RS14900 0.13 -0.2 3,015,362 - A4249_RS14900 0.16 -0.6 3,015,421 + A4249_RS14900 0.22 +1.6 3,015,421 + A4249_RS14900 0.22 -1.2 3,015,421 + A4249_RS14900 0.22 -0.3 3,015,421 + A4249_RS14900 0.22 +0.0 3,015,422 - A4249_RS14900 0.22 -0.5 3,015,422 - A4249_RS14900 0.22 -1.2 3,015,422 - A4249_RS14900 0.22 -1.2 3,015,754 + A4249_RS14900 0.55 +1.9 3,015,754 + A4249_RS14900 0.55 -0.9 3,015,754 + A4249_RS14900 0.55 -0.9 3,015,755 - A4249_RS14900 0.55 +0.2 3,015,755 - A4249_RS14900 0.55 +2.8 3,015,826 + A4249_RS14900 0.62 +1.2 3,015,826 + A4249_RS14900 0.62 -0.6 3,015,826 + A4249_RS14900 0.62 +0.1 3,015,826 + A4249_RS14900 0.62 +1.0 3,015,826 + A4249_RS14900 0.62 +0.4 3,015,827 - A4249_RS14900 0.62 +0.1 3,015,827 - A4249_RS14900 0.62 -0.2 3,015,827 - A4249_RS14900 0.62 -0.6 3,015,827 - A4249_RS14900 0.62 +0.7 3,015,827 - A4249_RS14900 0.62 -0.2 3,015,827 - A4249_RS14900 0.62 -1.5 3,015,827 - A4249_RS14900 0.62 +0.7 3,015,827 - A4249_RS14900 0.62 +0.7 3,015,827 - A4249_RS14900 0.62 -0.2 3,015,964 + A4249_RS14900 0.75 +0.2 3,015,964 + A4249_RS14900 0.75 +0.0 3,015,964 + A4249_RS14900 0.75 -0.2 3,015,964 + A4249_RS14900 0.75 -0.6 3,015,965 - A4249_RS14900 0.75 +0.0 3,015,979 + A4249_RS14900 0.77 -1.3 3,015,980 - A4249_RS14900 0.77 +0.9 3,015,980 - A4249_RS14900 0.77 +1.0 3,016,179 + -0.7 3,016,179 + +0.5 3,016,254 + +1.2 3,016,255 - -0.4 3,016,255 - -1.5 3,016,302 + A4249_RS14905 0.11 +1.7 3,016,302 + A4249_RS14905 0.11 +0.4 3,016,303 - A4249_RS14905 0.11 +0.7 3,016,345 - A4249_RS14905 0.17 -1.7 3,016,497 - A4249_RS14905 0.35 +1.4 3,016,497 - A4249_RS14905 0.35 +0.2 3,016,566 + A4249_RS14905 0.44 +1.4 3,016,635 - A4249_RS14905 0.52 +1.0 3,016,635 - A4249_RS14905 0.52 +0.2 3,016,985 + +1.1 3,016,986 - +0.6 3,017,030 - -1.4 3,017,030 - -1.6 3,017,037 + -0.2 3,017,038 - +0.5 3,017,058 + +2.0 3,017,058 + +2.3 3,017,059 - +0.8 3,017,059 - +0.2 3,017,086 + +0.7 3,017,087 - -0.9 3,017,087 - -0.7 3,017,087 - +1.0 3,017,161 + -0.6 3,017,162 - -1.3
Or see this region's nucleotide sequence