Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14475

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14465 and A4249_RS14470 are separated by 61 nucleotidesA4249_RS14470 and A4249_RS14475 are separated by 129 nucleotidesA4249_RS14475 and A4249_RS14480 are separated by 48 nucleotides A4249_RS14465: A4249_RS14465 - sulfite exporter TauE/SafE family protein, at 2,926,277 to 2,927,053 _RS14465 A4249_RS14470: A4249_RS14470 - PEGA domain-containing protein, at 2,927,115 to 2,927,582 _RS14470 A4249_RS14475: A4249_RS14475 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 2,927,712 to 2,928,848 _RS14475 A4249_RS14480: A4249_RS14480 - helix-turn-helix domain-containing protein, at 2,928,897 to 2,930,000 _RS14480 Position (kb) 2927 2928 2929Strain fitness (log2 ratio) -2 -1 0 1 2at 2926.795 kb on + strand, within A4249_RS14465at 2926.795 kb on + strand, within A4249_RS14465at 2926.796 kb on - strand, within A4249_RS14465at 2926.985 kb on + strandat 2926.986 kb on - strandat 2926.986 kb on - strandat 2926.986 kb on - strandat 2927.276 kb on + strand, within A4249_RS14470at 2927.276 kb on + strand, within A4249_RS14470at 2927.277 kb on - strand, within A4249_RS14470at 2927.277 kb on - strand, within A4249_RS14470at 2927.277 kb on - strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.344 kb on + strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.345 kb on - strand, within A4249_RS14470at 2927.714 kb on - strandat 2928.859 kb on + strandat 2928.859 kb on + strandat 2928.859 kb on + strandat 2928.859 kb on + strandat 2928.859 kb on + strandat 2928.859 kb on + strandat 2928.859 kb on + strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.860 kb on - strandat 2928.861 kb on + strandat 2928.861 kb on + strandat 2928.861 kb on + strandat 2928.861 kb on + strandat 2928.861 kb on + strandat 2928.862 kb on - strandat 2928.862 kb on - strandat 2928.862 kb on - strandat 2928.862 kb on - strandat 2928.862 kb on - strandat 2928.862 kb on - strandat 2928.862 kb on - strandat 2929.102 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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2,926,795 + A4249_RS14465 0.67 -0.2
2,926,795 + A4249_RS14465 0.67 -2.0
2,926,796 - A4249_RS14465 0.67 +0.4
2,926,985 + -1.2
2,926,986 - -1.7
2,926,986 - +0.5
2,926,986 - +0.2
2,927,276 + A4249_RS14470 0.34 +0.8
2,927,276 + A4249_RS14470 0.34 -0.7
2,927,277 - A4249_RS14470 0.35 +2.0
2,927,277 - A4249_RS14470 0.35 -1.0
2,927,277 - A4249_RS14470 0.35 -0.2
2,927,344 + A4249_RS14470 0.49 +0.4
2,927,344 + A4249_RS14470 0.49 +0.8
2,927,344 + A4249_RS14470 0.49 -1.0
2,927,344 + A4249_RS14470 0.49 +1.0
2,927,344 + A4249_RS14470 0.49 +0.3
2,927,344 + A4249_RS14470 0.49 +1.2
2,927,344 + A4249_RS14470 0.49 +1.2
2,927,344 + A4249_RS14470 0.49 -0.1
2,927,344 + A4249_RS14470 0.49 +0.1
2,927,344 + A4249_RS14470 0.49 +0.9
2,927,344 + A4249_RS14470 0.49 +1.4
2,927,344 + A4249_RS14470 0.49 -2.0
2,927,345 - A4249_RS14470 0.49 +0.5
2,927,345 - A4249_RS14470 0.49 -0.1
2,927,345 - A4249_RS14470 0.49 +0.8
2,927,345 - A4249_RS14470 0.49 +1.0
2,927,345 - A4249_RS14470 0.49 -0.2
2,927,345 - A4249_RS14470 0.49 -0.0
2,927,345 - A4249_RS14470 0.49 +0.8
2,927,345 - A4249_RS14470 0.49 -0.0
2,927,714 - -0.1
2,928,859 + +0.2
2,928,859 + -0.5
2,928,859 + +1.0
2,928,859 + +0.3
2,928,859 + +0.2
2,928,859 + -0.2
2,928,859 + +1.7
2,928,860 - +0.8
2,928,860 - -0.8
2,928,860 - -0.4
2,928,860 - +0.4
2,928,860 - +0.3
2,928,860 - -1.7
2,928,860 - -0.1
2,928,860 - -0.8
2,928,860 - -0.2
2,928,860 - -0.9
2,928,860 - -1.3
2,928,861 + -0.1
2,928,861 + -1.3
2,928,861 + -1.3
2,928,861 + -0.1
2,928,861 + +2.0
2,928,862 - +0.3
2,928,862 - +0.0
2,928,862 - +0.2
2,928,862 - +1.1
2,928,862 - +0.2
2,928,862 - +0.8
2,928,862 - -2.4
2,929,102 + A4249_RS14480 0.19 -0.4
2,929,300 + A4249_RS14480 0.37 +0.0
2,929,300 + A4249_RS14480 0.37 +0.4
2,929,300 + A4249_RS14480 0.37 +0.1
2,929,300 + A4249_RS14480 0.37 +0.1
2,929,301 - A4249_RS14480 0.37 +1.2
2,929,301 - A4249_RS14480 0.37 +0.3
2,929,301 - A4249_RS14480 0.37 +0.1
2,929,301 - A4249_RS14480 0.37 -0.2
2,929,420 + A4249_RS14480 0.47 -1.7
2,929,420 + A4249_RS14480 0.47 +0.5
2,929,420 + A4249_RS14480 0.47 +0.1
2,929,420 + A4249_RS14480 0.47 -1.4
2,929,420 + A4249_RS14480 0.47 +2.1
2,929,420 + A4249_RS14480 0.47 +0.5
2,929,421 - A4249_RS14480 0.47 +0.7
2,929,421 - A4249_RS14480 0.47 +0.5
2,929,421 - A4249_RS14480 0.47 -0.1
2,929,421 - A4249_RS14480 0.47 -0.0
2,929,421 - A4249_RS14480 0.47 -0.5
2,929,421 - A4249_RS14480 0.47 +0.2
2,929,421 - A4249_RS14480 0.47 +0.5

Or see this region's nucleotide sequence