Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13540

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13535 and A4249_RS13540 overlap by 4 nucleotidesA4249_RS13540 and A4249_RS13545 are separated by 25 nucleotidesA4249_RS13545 and A4249_RS13550 overlap by 4 nucleotides A4249_RS13535: A4249_RS13535 - bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ, at 2,737,199 to 2,738,593 _RS13535 A4249_RS13540: A4249_RS13540 - (deoxy)nucleoside triphosphate pyrophosphohydrolase, at 2,738,590 to 2,739,003 _RS13540 A4249_RS13545: A4249_RS13545 - Flp family type IVb pilin, at 2,739,029 to 2,739,217 _RS13545 A4249_RS13550: A4249_RS13550 - methyltransferase domain-containing protein, at 2,739,214 to 2,740,116 _RS13550 Position (kb) 2738 2739 2740Strain fitness (log2 ratio) -2 -1 0 1 2at 2737.600 kb on + strand, within A4249_RS13535at 2737.600 kb on + strand, within A4249_RS13535at 2737.601 kb on - strand, within A4249_RS13535at 2737.859 kb on + strand, within A4249_RS13535at 2737.883 kb on + strand, within A4249_RS13535at 2737.883 kb on + strand, within A4249_RS13535at 2737.883 kb on + strand, within A4249_RS13535at 2737.883 kb on + strand, within A4249_RS13535at 2737.884 kb on - strand, within A4249_RS13535at 2737.884 kb on - strand, within A4249_RS13535at 2737.884 kb on - strand, within A4249_RS13535at 2737.884 kb on - strand, within A4249_RS13535at 2737.884 kb on - strand, within A4249_RS13535at 2738.447 kb on + strand, within A4249_RS13535at 2738.447 kb on + strand, within A4249_RS13535at 2738.448 kb on - strand, within A4249_RS13535at 2738.448 kb on - strand, within A4249_RS13535at 2738.448 kb on - strand, within A4249_RS13535at 2738.471 kb on + strandat 2738.471 kb on + strandat 2738.471 kb on + strandat 2738.471 kb on + strandat 2738.472 kb on - strandat 2738.472 kb on - strandat 2738.472 kb on - strandat 2738.473 kb on + strandat 2738.474 kb on - strandat 2738.562 kb on - strandat 2738.562 kb on - strandat 2738.562 kb on - strandat 2738.582 kb on + strandat 2738.583 kb on - strandat 2738.833 kb on + strand, within A4249_RS13540at 2738.833 kb on + strand, within A4249_RS13540at 2738.833 kb on + strand, within A4249_RS13540at 2738.834 kb on - strand, within A4249_RS13540at 2738.834 kb on - strand, within A4249_RS13540at 2738.834 kb on - strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.863 kb on + strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.864 kb on - strand, within A4249_RS13540at 2738.947 kb on + strand, within A4249_RS13540at 2738.948 kb on - strand, within A4249_RS13540at 2738.948 kb on - strand, within A4249_RS13540at 2738.948 kb on - strand, within A4249_RS13540at 2739.198 kb on + strand, within A4249_RS13545at 2739.198 kb on + strand, within A4249_RS13545at 2739.198 kb on + strand, within A4249_RS13545at 2739.199 kb on - strandat 2739.199 kb on - strandat 2739.199 kb on - strandat 2739.199 kb on - strandat 2739.210 kb on + strandat 2739.210 kb on + strandat 2739.211 kb on - strandat 2739.215 kb on + strandat 2739.215 kb on + strandat 2739.215 kb on + strandat 2739.215 kb on + strandat 2739.216 kb on - strandat 2739.216 kb on - strandat 2739.216 kb on - strandat 2739.216 kb on - strandat 2739.216 kb on - strandat 2739.216 kb on - strandat 2739.216 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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2,737,600 + A4249_RS13535 0.29 -0.7
2,737,600 + A4249_RS13535 0.29 +1.4
2,737,601 - A4249_RS13535 0.29 -0.1
2,737,859 + A4249_RS13535 0.47 +0.0
2,737,883 + A4249_RS13535 0.49 +1.2
2,737,883 + A4249_RS13535 0.49 +1.4
2,737,883 + A4249_RS13535 0.49 -0.0
2,737,883 + A4249_RS13535 0.49 -0.6
2,737,884 - A4249_RS13535 0.49 +0.4
2,737,884 - A4249_RS13535 0.49 -1.1
2,737,884 - A4249_RS13535 0.49 +0.7
2,737,884 - A4249_RS13535 0.49 -1.2
2,737,884 - A4249_RS13535 0.49 +0.0
2,738,447 + A4249_RS13535 0.89 +0.2
2,738,447 + A4249_RS13535 0.89 +1.7
2,738,448 - A4249_RS13535 0.90 +2.0
2,738,448 - A4249_RS13535 0.90 +0.0
2,738,448 - A4249_RS13535 0.90 -0.7
2,738,471 + +1.8
2,738,471 + +0.4
2,738,471 + -0.8
2,738,471 + +2.0
2,738,472 - +0.2
2,738,472 - +1.9
2,738,472 - -0.1
2,738,473 + -0.1
2,738,474 - +1.0
2,738,562 - -0.1
2,738,562 - -0.9
2,738,562 - -0.0
2,738,582 + -0.4
2,738,583 - -0.7
2,738,833 + A4249_RS13540 0.59 -0.0
2,738,833 + A4249_RS13540 0.59 -0.8
2,738,833 + A4249_RS13540 0.59 -0.5
2,738,834 - A4249_RS13540 0.59 +0.7
2,738,834 - A4249_RS13540 0.59 +0.3
2,738,834 - A4249_RS13540 0.59 -0.3
2,738,863 + A4249_RS13540 0.66 -0.4
2,738,863 + A4249_RS13540 0.66 +0.3
2,738,863 + A4249_RS13540 0.66 +0.0
2,738,863 + A4249_RS13540 0.66 -0.1
2,738,863 + A4249_RS13540 0.66 +0.7
2,738,863 + A4249_RS13540 0.66 -0.4
2,738,863 + A4249_RS13540 0.66 -0.5
2,738,863 + A4249_RS13540 0.66 -0.6
2,738,863 + A4249_RS13540 0.66 +0.6
2,738,863 + A4249_RS13540 0.66 +0.3
2,738,863 + A4249_RS13540 0.66 -1.4
2,738,864 - A4249_RS13540 0.66 -1.5
2,738,864 - A4249_RS13540 0.66 +1.5
2,738,864 - A4249_RS13540 0.66 +0.5
2,738,864 - A4249_RS13540 0.66 -1.0
2,738,864 - A4249_RS13540 0.66 +0.9
2,738,864 - A4249_RS13540 0.66 -1.1
2,738,864 - A4249_RS13540 0.66 +0.0
2,738,864 - A4249_RS13540 0.66 +0.2
2,738,864 - A4249_RS13540 0.66 +0.3
2,738,864 - A4249_RS13540 0.66 +1.1
2,738,947 + A4249_RS13540 0.86 +0.4
2,738,948 - A4249_RS13540 0.86 -0.9
2,738,948 - A4249_RS13540 0.86 -0.9
2,738,948 - A4249_RS13540 0.86 +1.0
2,739,198 + A4249_RS13545 0.89 -0.0
2,739,198 + A4249_RS13545 0.89 -0.9
2,739,198 + A4249_RS13545 0.89 -0.3
2,739,199 - -1.7
2,739,199 - -0.4
2,739,199 - -1.8
2,739,199 - +0.8
2,739,210 + +0.7
2,739,210 + -0.1
2,739,211 - -0.0
2,739,215 + -0.5
2,739,215 + -0.5
2,739,215 + -1.2
2,739,215 + -0.2
2,739,216 - -0.8
2,739,216 - +0.3
2,739,216 - -0.8
2,739,216 - +0.7
2,739,216 - +0.9
2,739,216 - +0.2
2,739,216 - +0.8

Or see this region's nucleotide sequence