Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13390 and A4249_RS13395 are separated by 208 nucleotides A4249_RS13395 and A4249_RS13400 are separated by 50 nucleotides A4249_RS13400 and A4249_RS13405 are separated by 382 nucleotides
A4249_RS13390: A4249_RS13390 - NADP-dependent isocitrate dehydrogenase, at 2,704,905 to 2,706,125
_RS13390
A4249_RS13395: A4249_RS13395 - DUF2939 domain-containing protein, at 2,706,334 to 2,706,915
_RS13395
A4249_RS13400: A4249_RS13400 - DUF2939 domain-containing protein, at 2,706,966 to 2,707,520
_RS13400
A4249_RS13405: A4249_RS13405 - alanine--tRNA ligase, at 2,707,903 to 2,710,560
_RS13405
Position (kb)
2706
2707 Strain fitness (log2 ratio)
-2
-1
0
1 at 2706.130 kb on - strand at 2706.130 kb on - strand at 2706.234 kb on + strand at 2706.235 kb on - strand at 2706.318 kb on + strand at 2706.629 kb on - strand, within A4249_RS13395 at 2706.677 kb on - strand, within A4249_RS13395 at 2706.677 kb on - strand, within A4249_RS13395 at 2706.751 kb on + strand, within A4249_RS13395 at 2706.751 kb on + strand, within A4249_RS13395 at 2706.751 kb on + strand, within A4249_RS13395 at 2706.751 kb on + strand, within A4249_RS13395 at 2707.380 kb on + strand, within A4249_RS13400 at 2707.380 kb on + strand, within A4249_RS13400 at 2707.380 kb on + strand, within A4249_RS13400 at 2707.381 kb on - strand, within A4249_RS13400 at 2707.381 kb on - strand, within A4249_RS13400 at 2707.472 kb on + strand at 2707.546 kb on + strand at 2707.546 kb on + strand at 2707.547 kb on - strand at 2707.547 kb on - strand at 2707.547 kb on - strand at 2707.547 kb on - strand at 2707.547 kb on - strand at 2707.547 kb on - strand at 2707.547 kb on - strand at 2707.555 kb on + strand at 2707.555 kb on + strand at 2707.555 kb on + strand at 2707.556 kb on - strand at 2707.654 kb on + strand at 2707.655 kb on - strand at 2707.656 kb on + strand at 2707.656 kb on + strand at 2707.656 kb on + strand at 2707.656 kb on + strand at 2707.657 kb on - strand at 2707.657 kb on - strand at 2707.657 kb on - strand at 2707.657 kb on - strand at 2707.657 kb on - strand at 2707.657 kb on - strand at 2707.702 kb on + strand at 2707.703 kb on - strand at 2707.797 kb on + strand at 2707.797 kb on + strand at 2707.797 kb on + strand at 2707.797 kb on + strand at 2707.798 kb on - strand at 2707.798 kb on - strand at 2707.798 kb on - strand at 2707.904 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 2,706,130 - -0.2 2,706,130 - +0.4 2,706,234 + -0.2 2,706,235 - +0.4 2,706,318 + -0.2 2,706,629 - A4249_RS13395 0.51 +0.8 2,706,677 - A4249_RS13395 0.59 -1.0 2,706,677 - A4249_RS13395 0.59 -0.2 2,706,751 + A4249_RS13395 0.72 -2.2 2,706,751 + A4249_RS13395 0.72 -2.2 2,706,751 + A4249_RS13395 0.72 -0.2 2,706,751 + A4249_RS13395 0.72 -0.5 2,707,380 + A4249_RS13400 0.75 -0.5 2,707,380 + A4249_RS13400 0.75 -0.0 2,707,380 + A4249_RS13400 0.75 -1.1 2,707,381 - A4249_RS13400 0.75 +0.4 2,707,381 - A4249_RS13400 0.75 +0.1 2,707,472 + +1.1 2,707,546 + +0.3 2,707,546 + -1.1 2,707,547 - -1.3 2,707,547 - +1.7 2,707,547 - -0.6 2,707,547 - -0.6 2,707,547 - +0.1 2,707,547 - +0.2 2,707,547 - +0.2 2,707,555 + -1.6 2,707,555 + +1.3 2,707,555 + -0.2 2,707,556 - -0.4 2,707,654 + +0.3 2,707,655 - +0.3 2,707,656 + +0.2 2,707,656 + -0.2 2,707,656 + +0.2 2,707,656 + +0.5 2,707,657 - -0.3 2,707,657 - -1.9 2,707,657 - -0.4 2,707,657 - +0.4 2,707,657 - -0.7 2,707,657 - -0.3 2,707,702 + -0.8 2,707,703 - -1.0 2,707,797 + +0.4 2,707,797 + +0.4 2,707,797 + -0.1 2,707,797 + -1.3 2,707,798 - +0.1 2,707,798 - +0.0 2,707,798 - -0.1 2,707,904 + +0.5
Or see this region's nucleotide sequence