Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11460 and A4249_RS11465 are separated by 32 nucleotides A4249_RS11465 and A4249_RS11470 are separated by 1 nucleotides A4249_RS11470 and A4249_RS11475 are separated by 151 nucleotides
A4249_RS11460: A4249_RS11460 - DUF2125 domain-containing protein, at 2,304,439 to 2,305,497
_RS11460
A4249_RS11465: A4249_RS11465 - Cys-tRNA(Pro) deacylase, at 2,305,530 to 2,306,003
_RS11465
A4249_RS11470: A4249_RS11470 - ATP-dependent DNA helicase, at 2,306,005 to 2,308,860
_RS11470
A4249_RS11475: A4249_RS11475 - ligase-associated DNA damage response DEXH box helicase, at 2,309,012 to 2,311,426
_RS11475
Position (kb)
2306
2307
2308
2309 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2305.196 kb on + strand, within A4249_RS11460 at 2305.196 kb on + strand, within A4249_RS11460 at 2305.197 kb on - strand, within A4249_RS11460 at 2305.197 kb on - strand, within A4249_RS11460 at 2305.197 kb on - strand, within A4249_RS11460 at 2305.197 kb on - strand, within A4249_RS11460 at 2305.197 kb on - strand, within A4249_RS11460 at 2305.451 kb on + strand at 2305.451 kb on + strand at 2305.451 kb on + strand at 2305.451 kb on + strand at 2305.452 kb on - strand at 2305.452 kb on - strand at 2305.452 kb on - strand at 2305.452 kb on - strand at 2305.452 kb on - strand at 2305.452 kb on - strand at 2305.452 kb on - strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.506 kb on + strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.507 kb on - strand at 2305.509 kb on - strand at 2305.531 kb on + strand at 2305.531 kb on + strand at 2305.532 kb on - strand at 2305.664 kb on + strand, within A4249_RS11465 at 2305.711 kb on + strand, within A4249_RS11465 at 2305.711 kb on + strand, within A4249_RS11465 at 2305.711 kb on + strand, within A4249_RS11465 at 2305.712 kb on - strand, within A4249_RS11465 at 2305.712 kb on - strand, within A4249_RS11465 at 2305.930 kb on + strand, within A4249_RS11465 at 2305.930 kb on + strand, within A4249_RS11465 at 2305.930 kb on + strand, within A4249_RS11465 at 2305.931 kb on - strand, within A4249_RS11465 at 2305.931 kb on - strand, within A4249_RS11465 at 2305.931 kb on - strand, within A4249_RS11465 at 2305.931 kb on - strand, within A4249_RS11465 at 2305.931 kb on - strand, within A4249_RS11465 at 2305.931 kb on - strand, within A4249_RS11465 at 2305.937 kb on - strand, within A4249_RS11465 at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.006 kb on + strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.007 kb on - strand at 2306.132 kb on - strand at 2306.213 kb on + strand at 2306.213 kb on + strand at 2306.213 kb on + strand at 2306.214 kb on - strand at 2306.214 kb on - strand at 2306.423 kb on + strand, within A4249_RS11470 at 2306.423 kb on + strand, within A4249_RS11470 at 2306.424 kb on - strand, within A4249_RS11470 at 2306.468 kb on + strand, within A4249_RS11470 at 2306.468 kb on + strand, within A4249_RS11470 at 2306.468 kb on + strand, within A4249_RS11470 at 2306.468 kb on + strand, within A4249_RS11470 at 2306.468 kb on + strand, within A4249_RS11470 at 2306.469 kb on - strand, within A4249_RS11470 at 2306.615 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.158 kb on + strand, within A4249_RS11470 at 2307.159 kb on - strand, within A4249_RS11470 at 2307.159 kb on - strand, within A4249_RS11470 at 2307.159 kb on - strand, within A4249_RS11470 at 2307.159 kb on - strand, within A4249_RS11470 at 2307.159 kb on - strand, within A4249_RS11470 at 2307.159 kb on - strand, within A4249_RS11470 at 2307.662 kb on + strand, within A4249_RS11470 at 2307.801 kb on + strand, within A4249_RS11470 at 2307.801 kb on + strand, within A4249_RS11470 at 2307.801 kb on + strand, within A4249_RS11470 at 2307.801 kb on + strand, within A4249_RS11470 at 2307.802 kb on - strand, within A4249_RS11470 at 2307.802 kb on - strand, within A4249_RS11470 at 2307.802 kb on - strand, within A4249_RS11470 at 2307.802 kb on - strand, within A4249_RS11470 at 2307.899 kb on + strand, within A4249_RS11470 at 2307.899 kb on + strand, within A4249_RS11470 at 2307.899 kb on + strand, within A4249_RS11470 at 2307.899 kb on + strand, within A4249_RS11470 at 2307.899 kb on + strand, within A4249_RS11470 at 2307.899 kb on + strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2307.900 kb on - strand, within A4249_RS11470 at 2308.002 kb on + strand, within A4249_RS11470 at 2308.003 kb on - strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.004 kb on + strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.005 kb on - strand, within A4249_RS11470 at 2308.064 kb on + strand, within A4249_RS11470 at 2308.064 kb on + strand, within A4249_RS11470 at 2308.064 kb on + strand, within A4249_RS11470 at 2308.065 kb on - strand, within A4249_RS11470 at 2308.166 kb on + strand, within A4249_RS11470 at 2308.427 kb on + strand, within A4249_RS11470 at 2308.427 kb on + strand, within A4249_RS11470 at 2308.427 kb on + strand, within A4249_RS11470 at 2308.427 kb on + strand, within A4249_RS11470 at 2308.427 kb on + strand, within A4249_RS11470 at 2308.428 kb on - strand, within A4249_RS11470 at 2308.428 kb on - strand, within A4249_RS11470 at 2308.428 kb on - strand, within A4249_RS11470 at 2308.428 kb on - strand, within A4249_RS11470 at 2308.428 kb on - strand, within A4249_RS11470 at 2308.601 kb on + strand at 2308.601 kb on + strand at 2308.602 kb on - strand at 2308.602 kb on - strand at 2308.867 kb on + strand at 2308.867 kb on + strand at 2308.868 kb on - strand at 2308.868 kb on - strand at 2308.868 kb on - strand at 2308.871 kb on + strand at 2308.871 kb on + strand at 2308.871 kb on + strand at 2308.907 kb on + strand at 2308.907 kb on + strand at 2308.907 kb on + strand at 2308.907 kb on + strand at 2308.908 kb on - strand at 2308.908 kb on - strand at 2308.908 kb on - strand at 2308.908 kb on - strand at 2308.908 kb on - strand at 2308.910 kb on - strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.158 kb on + strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.159 kb on - strand at 2309.165 kb on + strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.166 kb on - strand at 2309.375 kb on + strand, within A4249_RS11475 at 2309.375 kb on + strand, within A4249_RS11475 at 2309.375 kb on + strand, within A4249_RS11475 at 2309.375 kb on + strand, within A4249_RS11475 at 2309.375 kb on + strand, within A4249_RS11475 at 2309.684 kb on + strand, within A4249_RS11475 at 2309.684 kb on + strand, within A4249_RS11475 at 2309.684 kb on + strand, within A4249_RS11475 at 2309.684 kb on + strand, within A4249_RS11475 at 2309.684 kb on + strand, within A4249_RS11475 at 2309.684 kb on + strand, within A4249_RS11475 at 2309.685 kb on - strand, within A4249_RS11475 at 2309.685 kb on - strand, within A4249_RS11475 at 2309.685 kb on - strand, within A4249_RS11475 at 2309.685 kb on - strand, within A4249_RS11475 at 2309.685 kb on - strand, within A4249_RS11475 at 2309.685 kb on - strand, within A4249_RS11475
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 2,305,196 + A4249_RS11460 0.71 -0.5 2,305,196 + A4249_RS11460 0.71 +0.3 2,305,197 - A4249_RS11460 0.72 +0.9 2,305,197 - A4249_RS11460 0.72 +0.7 2,305,197 - A4249_RS11460 0.72 +0.9 2,305,197 - A4249_RS11460 0.72 -0.8 2,305,197 - A4249_RS11460 0.72 +0.3 2,305,451 + +1.1 2,305,451 + +0.8 2,305,451 + +0.9 2,305,451 + +0.4 2,305,452 - +0.8 2,305,452 - -0.4 2,305,452 - +1.2 2,305,452 - +0.4 2,305,452 - +2.1 2,305,452 - +0.4 2,305,452 - +0.2 2,305,506 + +0.5 2,305,506 + -0.7 2,305,506 + +0.7 2,305,506 + -0.6 2,305,506 + -0.1 2,305,506 + -1.2 2,305,506 + -0.7 2,305,506 + +2.0 2,305,507 - +0.1 2,305,507 - -0.7 2,305,507 - -0.4 2,305,507 - -0.4 2,305,507 - -0.4 2,305,507 - -1.5 2,305,507 - +2.0 2,305,507 - -0.7 2,305,507 - -0.7 2,305,507 - -0.6 2,305,509 - -0.5 2,305,531 + +0.5 2,305,531 + +0.3 2,305,532 - +0.6 2,305,664 + A4249_RS11465 0.28 -1.1 2,305,711 + A4249_RS11465 0.38 -1.2 2,305,711 + A4249_RS11465 0.38 -1.1 2,305,711 + A4249_RS11465 0.38 +0.3 2,305,712 - A4249_RS11465 0.38 -0.4 2,305,712 - A4249_RS11465 0.38 +0.4 2,305,930 + A4249_RS11465 0.84 -0.2 2,305,930 + A4249_RS11465 0.84 -1.5 2,305,930 + A4249_RS11465 0.84 -0.2 2,305,931 - A4249_RS11465 0.85 +0.1 2,305,931 - A4249_RS11465 0.85 -0.7 2,305,931 - A4249_RS11465 0.85 +0.2 2,305,931 - A4249_RS11465 0.85 +0.6 2,305,931 - A4249_RS11465 0.85 +1.1 2,305,931 - A4249_RS11465 0.85 -0.9 2,305,937 - A4249_RS11465 0.86 -0.9 2,306,006 + -0.1 2,306,006 + +0.1 2,306,006 + -0.7 2,306,006 + -0.1 2,306,006 + +0.1 2,306,006 + +0.1 2,306,006 + -0.1 2,306,006 + +0.5 2,306,006 + -0.2 2,306,006 + -1.1 2,306,006 + +1.0 2,306,006 + +0.4 2,306,006 + -0.9 2,306,006 + -1.1 2,306,006 + -0.6 2,306,007 - +1.0 2,306,007 - -0.3 2,306,007 - -0.4 2,306,007 - -0.7 2,306,007 - -1.0 2,306,007 - -1.0 2,306,007 - -0.5 2,306,007 - -0.3 2,306,007 - +1.4 2,306,007 - +0.0 2,306,007 - -0.3 2,306,132 - +0.2 2,306,213 + +0.8 2,306,213 + +0.1 2,306,213 + +1.9 2,306,214 - -0.1 2,306,214 - -1.7 2,306,423 + A4249_RS11470 0.15 -0.4 2,306,423 + A4249_RS11470 0.15 -0.6 2,306,424 - A4249_RS11470 0.15 +0.8 2,306,468 + A4249_RS11470 0.16 -0.3 2,306,468 + A4249_RS11470 0.16 -0.4 2,306,468 + A4249_RS11470 0.16 -0.4 2,306,468 + A4249_RS11470 0.16 -0.2 2,306,468 + A4249_RS11470 0.16 +0.2 2,306,469 - A4249_RS11470 0.16 +0.3 2,306,615 + A4249_RS11470 0.21 +1.4 2,307,158 + A4249_RS11470 0.40 +1.0 2,307,158 + A4249_RS11470 0.40 -0.1 2,307,158 + A4249_RS11470 0.40 -0.3 2,307,158 + A4249_RS11470 0.40 -0.5 2,307,158 + A4249_RS11470 0.40 +0.2 2,307,158 + A4249_RS11470 0.40 -0.6 2,307,158 + A4249_RS11470 0.40 -0.6 2,307,158 + A4249_RS11470 0.40 -1.2 2,307,158 + A4249_RS11470 0.40 -1.6 2,307,159 - A4249_RS11470 0.40 +0.6 2,307,159 - A4249_RS11470 0.40 -0.7 2,307,159 - A4249_RS11470 0.40 +0.3 2,307,159 - A4249_RS11470 0.40 -0.1 2,307,159 - A4249_RS11470 0.40 +1.2 2,307,159 - A4249_RS11470 0.40 +0.9 2,307,662 + A4249_RS11470 0.58 +0.3 2,307,801 + A4249_RS11470 0.63 +0.1 2,307,801 + A4249_RS11470 0.63 +0.8 2,307,801 + A4249_RS11470 0.63 -0.0 2,307,801 + A4249_RS11470 0.63 -0.7 2,307,802 - A4249_RS11470 0.63 -0.3 2,307,802 - A4249_RS11470 0.63 -0.6 2,307,802 - A4249_RS11470 0.63 -0.9 2,307,802 - A4249_RS11470 0.63 -0.6 2,307,899 + A4249_RS11470 0.66 -0.7 2,307,899 + A4249_RS11470 0.66 +0.8 2,307,899 + A4249_RS11470 0.66 +0.4 2,307,899 + A4249_RS11470 0.66 +0.9 2,307,899 + A4249_RS11470 0.66 -0.6 2,307,899 + A4249_RS11470 0.66 +0.5 2,307,900 - A4249_RS11470 0.66 -0.6 2,307,900 - A4249_RS11470 0.66 +0.8 2,307,900 - A4249_RS11470 0.66 +0.3 2,307,900 - A4249_RS11470 0.66 -0.4 2,307,900 - A4249_RS11470 0.66 +0.1 2,307,900 - A4249_RS11470 0.66 +0.2 2,307,900 - A4249_RS11470 0.66 -0.9 2,307,900 - A4249_RS11470 0.66 -0.4 2,307,900 - A4249_RS11470 0.66 -0.6 2,307,900 - A4249_RS11470 0.66 +0.8 2,308,002 + A4249_RS11470 0.70 -1.5 2,308,003 - A4249_RS11470 0.70 -0.4 2,308,004 + A4249_RS11470 0.70 +0.2 2,308,004 + A4249_RS11470 0.70 -0.7 2,308,004 + A4249_RS11470 0.70 +1.2 2,308,004 + A4249_RS11470 0.70 -0.2 2,308,004 + A4249_RS11470 0.70 -0.1 2,308,004 + A4249_RS11470 0.70 +1.1 2,308,004 + A4249_RS11470 0.70 -0.2 2,308,004 + A4249_RS11470 0.70 -0.7 2,308,004 + A4249_RS11470 0.70 -0.5 2,308,004 + A4249_RS11470 0.70 -1.3 2,308,004 + A4249_RS11470 0.70 -0.5 2,308,005 - A4249_RS11470 0.70 -1.9 2,308,005 - A4249_RS11470 0.70 -0.4 2,308,005 - A4249_RS11470 0.70 -1.4 2,308,005 - A4249_RS11470 0.70 +1.3 2,308,005 - A4249_RS11470 0.70 +0.3 2,308,005 - A4249_RS11470 0.70 +0.2 2,308,005 - A4249_RS11470 0.70 -0.1 2,308,005 - A4249_RS11470 0.70 +0.5 2,308,005 - A4249_RS11470 0.70 -0.0 2,308,064 + A4249_RS11470 0.72 -0.1 2,308,064 + A4249_RS11470 0.72 -0.6 2,308,064 + A4249_RS11470 0.72 +0.9 2,308,065 - A4249_RS11470 0.72 +0.4 2,308,166 + A4249_RS11470 0.76 -0.7 2,308,427 + A4249_RS11470 0.85 -0.2 2,308,427 + A4249_RS11470 0.85 -0.4 2,308,427 + A4249_RS11470 0.85 +1.4 2,308,427 + A4249_RS11470 0.85 -0.0 2,308,427 + A4249_RS11470 0.85 -0.0 2,308,428 - A4249_RS11470 0.85 -1.4 2,308,428 - A4249_RS11470 0.85 -0.4 2,308,428 - A4249_RS11470 0.85 -0.9 2,308,428 - A4249_RS11470 0.85 -0.0 2,308,428 - A4249_RS11470 0.85 +0.5 2,308,601 + +0.3 2,308,601 + -0.8 2,308,602 - +1.0 2,308,602 - +1.0 2,308,867 + +0.2 2,308,867 + -0.6 2,308,868 - -0.2 2,308,868 - -1.4 2,308,868 - +0.1 2,308,871 + -1.5 2,308,871 + +0.3 2,308,871 + -0.7 2,308,907 + -1.2 2,308,907 + -0.0 2,308,907 + -0.2 2,308,907 + -0.7 2,308,908 - +0.6 2,308,908 - -0.1 2,308,908 - -0.3 2,308,908 - +0.7 2,308,908 - +0.2 2,308,910 - -0.1 2,309,158 + -0.5 2,309,158 + -0.6 2,309,158 + +0.3 2,309,158 + +0.6 2,309,158 + +0.3 2,309,158 + -0.5 2,309,158 + -0.7 2,309,158 + +0.8 2,309,158 + -1.0 2,309,158 + -0.3 2,309,158 + +1.5 2,309,158 + -0.1 2,309,158 + -0.7 2,309,158 + +0.1 2,309,159 - -1.3 2,309,159 - -0.2 2,309,159 - -0.3 2,309,159 - +0.0 2,309,159 - -0.3 2,309,159 - +0.5 2,309,159 - -0.5 2,309,159 - -0.2 2,309,159 - +0.3 2,309,159 - -0.2 2,309,159 - +0.6 2,309,159 - -2.2 2,309,159 - -0.1 2,309,159 - +0.2 2,309,165 + +1.1 2,309,166 - -0.3 2,309,166 - +0.0 2,309,166 - +0.2 2,309,166 - -1.3 2,309,166 - +0.2 2,309,166 - +1.1 2,309,166 - +0.6 2,309,166 - -0.2 2,309,166 - +0.1 2,309,166 - -1.0 2,309,166 - -0.1 2,309,375 + A4249_RS11475 0.15 +1.7 2,309,375 + A4249_RS11475 0.15 -1.8 2,309,375 + A4249_RS11475 0.15 -0.5 2,309,375 + A4249_RS11475 0.15 -0.2 2,309,375 + A4249_RS11475 0.15 -0.8 2,309,684 + A4249_RS11475 0.28 -1.9 2,309,684 + A4249_RS11475 0.28 +0.1 2,309,684 + A4249_RS11475 0.28 +0.8 2,309,684 + A4249_RS11475 0.28 -0.2 2,309,684 + A4249_RS11475 0.28 +1.7 2,309,684 + A4249_RS11475 0.28 +0.2 2,309,685 - A4249_RS11475 0.28 +0.7 2,309,685 - A4249_RS11475 0.28 -0.1 2,309,685 - A4249_RS11475 0.28 +1.6 2,309,685 - A4249_RS11475 0.28 -0.5 2,309,685 - A4249_RS11475 0.28 -0.6 2,309,685 - A4249_RS11475 0.28 +0.2
Or see this region's nucleotide sequence