Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11100

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11095 and A4249_RS11100 are separated by 168 nucleotidesA4249_RS11100 and A4249_RS11105 are separated by 91 nucleotidesA4249_RS11105 and A4249_RS11110 are separated by 55 nucleotidesA4249_RS11110 and A4249_RS11115 are separated by 162 nucleotides A4249_RS11095: A4249_RS11095 - polysaccharide deacetylase family protein, at 2,233,233 to 2,234,207 _RS11095 A4249_RS11100: A4249_RS11100 - response regulator, at 2,234,376 to 2,235,971 _RS11100 A4249_RS11105: A4249_RS11105 - 50S ribosomal protein L20, at 2,236,063 to 2,236,416 _RS11105 A4249_RS11110: A4249_RS11110 - 50S ribosomal protein L35, at 2,236,472 to 2,236,669 _RS11110 A4249_RS11115: A4249_RS11115 - MFS transporter, at 2,236,832 to 2,238,136 _RS11115 Position (kb) 2234 2235 2236Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.381 kb on + strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.382 kb on - strand, within A4249_RS11095at 2233.399 kb on + strand, within A4249_RS11095at 2233.400 kb on - strand, within A4249_RS11095at 2233.456 kb on + strand, within A4249_RS11095at 2233.456 kb on + strand, within A4249_RS11095at 2233.457 kb on - strand, within A4249_RS11095at 2233.457 kb on - strand, within A4249_RS11095at 2233.457 kb on - strand, within A4249_RS11095at 2233.457 kb on - strand, within A4249_RS11095at 2233.477 kb on + strand, within A4249_RS11095at 2233.477 kb on + strand, within A4249_RS11095at 2233.478 kb on - strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.480 kb on + strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.481 kb on - strand, within A4249_RS11095at 2233.512 kb on + strand, within A4249_RS11095at 2233.512 kb on + strand, within A4249_RS11095at 2233.513 kb on - strand, within A4249_RS11095at 2233.513 kb on - strand, within A4249_RS11095at 2233.513 kb on - strand, within A4249_RS11095at 2233.555 kb on + strand, within A4249_RS11095at 2233.555 kb on + strand, within A4249_RS11095at 2233.555 kb on + strand, within A4249_RS11095at 2233.555 kb on + strand, within A4249_RS11095at 2233.556 kb on - strand, within A4249_RS11095at 2233.564 kb on + strand, within A4249_RS11095at 2233.564 kb on + strand, within A4249_RS11095at 2233.564 kb on + strand, within A4249_RS11095at 2233.564 kb on + strand, within A4249_RS11095at 2233.564 kb on + strand, within A4249_RS11095at 2233.565 kb on - strand, within A4249_RS11095at 2233.565 kb on - strand, within A4249_RS11095at 2233.565 kb on - strand, within A4249_RS11095at 2233.565 kb on - strand, within A4249_RS11095at 2233.586 kb on + strand, within A4249_RS11095at 2233.587 kb on - strand, within A4249_RS11095at 2233.587 kb on - strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.597 kb on + strand, within A4249_RS11095at 2233.598 kb on - strand, within A4249_RS11095at 2233.598 kb on - strand, within A4249_RS11095at 2233.598 kb on - strand, within A4249_RS11095at 2233.654 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.706 kb on + strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.707 kb on - strand, within A4249_RS11095at 2233.708 kb on + strand, within A4249_RS11095at 2233.775 kb on - strand, within A4249_RS11095at 2233.861 kb on + strand, within A4249_RS11095at 2233.861 kb on + strand, within A4249_RS11095at 2233.861 kb on + strand, within A4249_RS11095at 2233.862 kb on - strand, within A4249_RS11095at 2233.862 kb on - strand, within A4249_RS11095at 2233.862 kb on - strand, within A4249_RS11095at 2233.862 kb on - strand, within A4249_RS11095at 2233.862 kb on - strand, within A4249_RS11095at 2233.862 kb on - strand, within A4249_RS11095at 2234.223 kb on - strandat 2234.244 kb on - strandat 2234.255 kb on + strandat 2234.255 kb on + strandat 2234.335 kb on + strandat 2234.335 kb on + strandat 2234.335 kb on + strandat 2234.335 kb on + strandat 2234.335 kb on + strandat 2234.345 kb on + strandat 2234.345 kb on + strandat 2234.345 kb on + strandat 2234.345 kb on + strandat 2234.345 kb on + strandat 2234.346 kb on - strandat 2234.346 kb on - strandat 2234.346 kb on - strandat 2234.346 kb on - strandat 2234.346 kb on - strandat 2234.346 kb on - strandat 2234.346 kb on - strandat 2234.574 kb on + strand, within A4249_RS11100at 2234.575 kb on - strand, within A4249_RS11100at 2234.575 kb on - strand, within A4249_RS11100at 2234.575 kb on - strand, within A4249_RS11100at 2234.575 kb on - strand, within A4249_RS11100at 2234.575 kb on - strand, within A4249_RS11100at 2234.661 kb on + strand, within A4249_RS11100at 2234.661 kb on + strand, within A4249_RS11100at 2234.662 kb on - strand, within A4249_RS11100at 2234.721 kb on + strand, within A4249_RS11100at 2234.722 kb on - strand, within A4249_RS11100at 2234.722 kb on - strand, within A4249_RS11100at 2234.967 kb on + strand, within A4249_RS11100at 2234.968 kb on - strand, within A4249_RS11100at 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.854 kb on + strandat 2235.854 kb on + strandat 2235.855 kb on - strandat 2236.023 kb on + strandat 2236.023 kb on + strandat 2236.065 kb on - strandat 2236.065 kb on - strandat 2236.480 kb on - strandat 2236.743 kb on - strandat 2236.743 kb on - strandat 2236.743 kb on - strandat 2236.802 kb on - strandat 2236.802 kb on - strandat 2236.802 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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2,233,381 + A4249_RS11095 0.15 +1.7
2,233,381 + A4249_RS11095 0.15 -0.3
2,233,381 + A4249_RS11095 0.15 -0.0
2,233,381 + A4249_RS11095 0.15 +0.4
2,233,381 + A4249_RS11095 0.15 -0.6
2,233,381 + A4249_RS11095 0.15 -0.2
2,233,381 + A4249_RS11095 0.15 +1.0
2,233,381 + A4249_RS11095 0.15 -0.2
2,233,381 + A4249_RS11095 0.15 -0.3
2,233,381 + A4249_RS11095 0.15 -1.4
2,233,382 - A4249_RS11095 0.15 +0.9
2,233,382 - A4249_RS11095 0.15 -0.9
2,233,382 - A4249_RS11095 0.15 +0.4
2,233,382 - A4249_RS11095 0.15 -0.8
2,233,382 - A4249_RS11095 0.15 -0.1
2,233,382 - A4249_RS11095 0.15 -2.2
2,233,382 - A4249_RS11095 0.15 -0.7
2,233,382 - A4249_RS11095 0.15 -0.9
2,233,382 - A4249_RS11095 0.15 -0.9
2,233,382 - A4249_RS11095 0.15 +0.3
2,233,382 - A4249_RS11095 0.15 -0.3
2,233,382 - A4249_RS11095 0.15 -0.9
2,233,382 - A4249_RS11095 0.15 +0.1
2,233,382 - A4249_RS11095 0.15 +0.2
2,233,382 - A4249_RS11095 0.15 +0.4
2,233,382 - A4249_RS11095 0.15 -0.5
2,233,399 + A4249_RS11095 0.17 -1.4
2,233,400 - A4249_RS11095 0.17 +0.6
2,233,456 + A4249_RS11095 0.23 +0.1
2,233,456 + A4249_RS11095 0.23 -2.8
2,233,457 - A4249_RS11095 0.23 +0.2
2,233,457 - A4249_RS11095 0.23 +0.6
2,233,457 - A4249_RS11095 0.23 -0.2
2,233,457 - A4249_RS11095 0.23 +0.0
2,233,477 + A4249_RS11095 0.25 -0.4
2,233,477 + A4249_RS11095 0.25 +0.2
2,233,478 - A4249_RS11095 0.25 -0.7
2,233,480 + A4249_RS11095 0.25 -0.6
2,233,480 + A4249_RS11095 0.25 +0.5
2,233,480 + A4249_RS11095 0.25 -0.3
2,233,480 + A4249_RS11095 0.25 +0.7
2,233,480 + A4249_RS11095 0.25 -1.0
2,233,480 + A4249_RS11095 0.25 +1.3
2,233,480 + A4249_RS11095 0.25 +0.4
2,233,480 + A4249_RS11095 0.25 -0.3
2,233,480 + A4249_RS11095 0.25 +0.5
2,233,480 + A4249_RS11095 0.25 +0.7
2,233,480 + A4249_RS11095 0.25 -0.6
2,233,480 + A4249_RS11095 0.25 -1.7
2,233,480 + A4249_RS11095 0.25 -0.7
2,233,480 + A4249_RS11095 0.25 -0.1
2,233,481 - A4249_RS11095 0.25 +0.3
2,233,481 - A4249_RS11095 0.25 -1.8
2,233,481 - A4249_RS11095 0.25 +0.9
2,233,481 - A4249_RS11095 0.25 -0.3
2,233,481 - A4249_RS11095 0.25 +0.5
2,233,481 - A4249_RS11095 0.25 -0.4
2,233,481 - A4249_RS11095 0.25 -0.3
2,233,481 - A4249_RS11095 0.25 -0.4
2,233,481 - A4249_RS11095 0.25 -0.3
2,233,481 - A4249_RS11095 0.25 +0.8
2,233,512 + A4249_RS11095 0.29 -0.2
2,233,512 + A4249_RS11095 0.29 -1.2
2,233,513 - A4249_RS11095 0.29 -0.7
2,233,513 - A4249_RS11095 0.29 -1.6
2,233,513 - A4249_RS11095 0.29 +0.2
2,233,555 + A4249_RS11095 0.33 +0.9
2,233,555 + A4249_RS11095 0.33 -0.1
2,233,555 + A4249_RS11095 0.33 -0.3
2,233,555 + A4249_RS11095 0.33 +0.3
2,233,556 - A4249_RS11095 0.33 -2.2
2,233,564 + A4249_RS11095 0.34 -1.0
2,233,564 + A4249_RS11095 0.34 +0.2
2,233,564 + A4249_RS11095 0.34 -2.3
2,233,564 + A4249_RS11095 0.34 -1.0
2,233,564 + A4249_RS11095 0.34 +1.2
2,233,565 - A4249_RS11095 0.34 -0.1
2,233,565 - A4249_RS11095 0.34 -0.1
2,233,565 - A4249_RS11095 0.34 -1.2
2,233,565 - A4249_RS11095 0.34 +0.4
2,233,586 + A4249_RS11095 0.36 +0.3
2,233,587 - A4249_RS11095 0.36 +0.7
2,233,587 - A4249_RS11095 0.36 -0.8
2,233,597 + A4249_RS11095 0.37 -0.0
2,233,597 + A4249_RS11095 0.37 -0.9
2,233,597 + A4249_RS11095 0.37 +0.6
2,233,597 + A4249_RS11095 0.37 -1.2
2,233,597 + A4249_RS11095 0.37 -0.1
2,233,597 + A4249_RS11095 0.37 +0.1
2,233,597 + A4249_RS11095 0.37 +0.5
2,233,597 + A4249_RS11095 0.37 +0.1
2,233,597 + A4249_RS11095 0.37 -0.3
2,233,597 + A4249_RS11095 0.37 -1.2
2,233,597 + A4249_RS11095 0.37 +0.5
2,233,597 + A4249_RS11095 0.37 -1.1
2,233,597 + A4249_RS11095 0.37 +1.2
2,233,597 + A4249_RS11095 0.37 +0.2
2,233,598 - A4249_RS11095 0.37 +0.2
2,233,598 - A4249_RS11095 0.37 +0.0
2,233,598 - A4249_RS11095 0.37 -2.1
2,233,654 + A4249_RS11095 0.43 +0.6
2,233,706 + A4249_RS11095 0.49 -0.2
2,233,706 + A4249_RS11095 0.49 +1.3
2,233,706 + A4249_RS11095 0.49 +0.9
2,233,706 + A4249_RS11095 0.49 +0.1
2,233,706 + A4249_RS11095 0.49 +0.7
2,233,706 + A4249_RS11095 0.49 +0.1
2,233,706 + A4249_RS11095 0.49 +0.1
2,233,707 - A4249_RS11095 0.49 +1.0
2,233,707 - A4249_RS11095 0.49 +1.4
2,233,707 - A4249_RS11095 0.49 -1.7
2,233,707 - A4249_RS11095 0.49 +0.1
2,233,707 - A4249_RS11095 0.49 +0.5
2,233,707 - A4249_RS11095 0.49 +0.0
2,233,707 - A4249_RS11095 0.49 -1.7
2,233,707 - A4249_RS11095 0.49 -0.2
2,233,708 + A4249_RS11095 0.49 -0.2
2,233,775 - A4249_RS11095 0.56 -0.6
2,233,861 + A4249_RS11095 0.64 +0.2
2,233,861 + A4249_RS11095 0.64 +0.3
2,233,861 + A4249_RS11095 0.64 +0.2
2,233,862 - A4249_RS11095 0.65 +0.8
2,233,862 - A4249_RS11095 0.65 -0.2
2,233,862 - A4249_RS11095 0.65 +1.1
2,233,862 - A4249_RS11095 0.65 -1.8
2,233,862 - A4249_RS11095 0.65 -0.3
2,233,862 - A4249_RS11095 0.65 -0.4
2,234,223 - -1.6
2,234,244 - -0.2
2,234,255 + +0.8
2,234,255 + -0.7
2,234,335 + -0.7
2,234,335 + +0.3
2,234,335 + -0.5
2,234,335 + +0.7
2,234,335 + -0.3
2,234,345 + -1.2
2,234,345 + -0.6
2,234,345 + +0.6
2,234,345 + -0.3
2,234,345 + -0.0
2,234,346 - +0.6
2,234,346 - -0.7
2,234,346 - -1.3
2,234,346 - -0.2
2,234,346 - -0.0
2,234,346 - -1.4
2,234,346 - -0.7
2,234,574 + A4249_RS11100 0.12 +0.2
2,234,575 - A4249_RS11100 0.12 -0.1
2,234,575 - A4249_RS11100 0.12 +0.3
2,234,575 - A4249_RS11100 0.12 -1.6
2,234,575 - A4249_RS11100 0.12 +0.3
2,234,575 - A4249_RS11100 0.12 +0.3
2,234,661 + A4249_RS11100 0.18 -1.8
2,234,661 + A4249_RS11100 0.18 -0.5
2,234,662 - A4249_RS11100 0.18 -0.3
2,234,721 + A4249_RS11100 0.22 -1.5
2,234,722 - A4249_RS11100 0.22 -0.9
2,234,722 - A4249_RS11100 0.22 -1.2
2,234,967 + A4249_RS11100 0.37 -0.1
2,234,968 - A4249_RS11100 0.37 +0.0
2,235,852 + -1.0
2,235,852 + +0.2
2,235,852 + -1.2
2,235,852 + +0.8
2,235,852 + +0.5
2,235,852 + -1.0
2,235,852 + -1.0
2,235,852 + +0.5
2,235,852 + +0.1
2,235,852 + -0.2
2,235,852 + -1.5
2,235,853 - -0.7
2,235,853 - +0.1
2,235,853 - -1.6
2,235,853 - +1.2
2,235,853 - +1.4
2,235,853 - +0.1
2,235,854 + -0.7
2,235,854 + -0.2
2,235,855 - +0.9
2,236,023 + +0.1
2,236,023 + +1.1
2,236,065 - +0.0
2,236,065 - +0.4
2,236,480 - -0.4
2,236,743 - -0.9
2,236,743 - +2.5
2,236,743 - +0.3
2,236,802 - +0.3
2,236,802 - +0.5
2,236,802 - +0.5

Or see this region's nucleotide sequence