Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10360 and A4249_RS10365 are separated by 79 nucleotides A4249_RS10365 and A4249_RS10370 overlap by 4 nucleotides A4249_RS10370 and A4249_RS10375 are separated by 55 nucleotides
A4249_RS10360: A4249_RS10360 - HAMP domain-containing sensor histidine kinase, at 2,078,080 to 2,079,789
_RS10360
A4249_RS10365: A4249_RS10365 - hypothetical protein, at 2,079,869 to 2,080,132
_RS10365
A4249_RS10370: A4249_RS10370 - hypothetical protein, at 2,080,129 to 2,080,989
_RS10370
A4249_RS10375: A4249_RS10375 - DUF1491 family protein, at 2,081,045 to 2,081,374
_RS10375
Position (kb)
2079
2080
2081 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2079.075 kb on + strand, within A4249_RS10360 at 2079.075 kb on + strand, within A4249_RS10360 at 2079.076 kb on - strand, within A4249_RS10360 at 2079.076 kb on - strand, within A4249_RS10360 at 2079.076 kb on - strand, within A4249_RS10360 at 2079.167 kb on - strand, within A4249_RS10360 at 2079.794 kb on + strand at 2079.794 kb on + strand at 2079.795 kb on - strand at 2079.795 kb on - strand at 2079.795 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.868 kb on + strand at 2079.869 kb on - strand at 2080.050 kb on + strand, within A4249_RS10365 at 2080.051 kb on - strand, within A4249_RS10365 at 2080.051 kb on - strand, within A4249_RS10365 at 2080.130 kb on + strand at 2080.130 kb on + strand at 2080.130 kb on + strand at 2080.131 kb on - strand at 2080.131 kb on - strand at 2080.330 kb on - strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.584 kb on - strand, within A4249_RS10370 at 2080.802 kb on + strand, within A4249_RS10370 at 2080.803 kb on - strand, within A4249_RS10370 at 2080.886 kb on + strand, within A4249_RS10370 at 2080.887 kb on - strand, within A4249_RS10370 at 2080.982 kb on - strand at 2080.982 kb on - strand at 2081.108 kb on + strand, within A4249_RS10375 at 2081.108 kb on + strand, within A4249_RS10375 at 2081.108 kb on + strand, within A4249_RS10375 at 2081.109 kb on - strand, within A4249_RS10375
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 2,079,075 + A4249_RS10360 0.58 +0.1 2,079,075 + A4249_RS10360 0.58 -0.5 2,079,076 - A4249_RS10360 0.58 +1.5 2,079,076 - A4249_RS10360 0.58 +0.4 2,079,076 - A4249_RS10360 0.58 -0.2 2,079,167 - A4249_RS10360 0.64 -0.1 2,079,794 + -0.6 2,079,794 + -0.9 2,079,795 - -0.3 2,079,795 - -0.1 2,079,795 - -0.4 2,079,828 - -0.2 2,079,828 - -0.1 2,079,828 - +0.5 2,079,828 - -0.1 2,079,835 + -1.1 2,079,835 + +0.3 2,079,835 + -1.4 2,079,835 + -0.1 2,079,835 + +1.0 2,079,835 + -0.5 2,079,836 - -2.1 2,079,836 - +1.0 2,079,836 - +2.3 2,079,836 - +0.4 2,079,836 - -1.1 2,079,836 - -0.9 2,079,868 + +0.8 2,079,869 - -1.1 2,080,050 + A4249_RS10365 0.69 -0.2 2,080,051 - A4249_RS10365 0.69 -2.2 2,080,051 - A4249_RS10365 0.69 -0.2 2,080,130 + -0.6 2,080,130 + -1.2 2,080,130 + -0.8 2,080,131 - +0.2 2,080,131 - +0.1 2,080,330 - A4249_RS10370 0.23 -1.1 2,080,583 + A4249_RS10370 0.53 +0.1 2,080,583 + A4249_RS10370 0.53 +0.1 2,080,583 + A4249_RS10370 0.53 -0.4 2,080,583 + A4249_RS10370 0.53 +0.0 2,080,584 - A4249_RS10370 0.53 +0.6 2,080,802 + A4249_RS10370 0.78 +0.8 2,080,803 - A4249_RS10370 0.78 -0.2 2,080,886 + A4249_RS10370 0.88 +0.1 2,080,887 - A4249_RS10370 0.88 -0.5 2,080,982 - +0.3 2,080,982 - +0.4 2,081,108 + A4249_RS10375 0.19 -0.4 2,081,108 + A4249_RS10375 0.19 -0.0 2,081,108 + A4249_RS10375 0.19 +1.5 2,081,109 - A4249_RS10375 0.19 +1.1
Or see this region's nucleotide sequence