Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06200 and A4249_RS06205 are separated by 125 nucleotides A4249_RS06205 and A4249_RS06210 overlap by 4 nucleotides A4249_RS06210 and A4249_RS06215 overlap by 4 nucleotides
A4249_RS06200: A4249_RS06200 - FUSC family protein, at 1,262,996 to 1,263,865
_RS06200
A4249_RS06205: A4249_RS06205 - lipid-A-disaccharide synthase, at 1,263,991 to 1,265,160
_RS06205
A4249_RS06210: A4249_RS06210 - UDP-2,3-diacylglucosamine diphosphatase LpxI, at 1,265,157 to 1,265,996
_RS06210
A4249_RS06215: A4249_RS06215 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 1,265,993 to 1,266,781
_RS06215
Position (kb)
1263
1264
1265
1266 Strain fitness (log2 ratio)
-1
0
1 at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.052 kb on + strand at 1263.053 kb on - strand at 1263.053 kb on - strand at 1263.053 kb on - strand at 1263.053 kb on - strand at 1263.053 kb on - strand at 1263.053 kb on - strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.870 kb on + strand at 1263.871 kb on - strand at 1263.871 kb on - strand at 1263.871 kb on - strand at 1263.871 kb on - strand at 1263.871 kb on - strand at 1263.873 kb on + strand at 1263.874 kb on - strand at 1263.906 kb on + strand at 1263.906 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 1,263,052 + -0.0 1,263,052 + -0.4 1,263,052 + +1.6 1,263,052 + -0.6 1,263,052 + -0.2 1,263,052 + -0.4 1,263,052 + +0.3 1,263,052 + +0.9 1,263,053 - +0.2 1,263,053 - -0.5 1,263,053 - -0.3 1,263,053 - -0.4 1,263,053 - +0.1 1,263,053 - -0.3 1,263,870 + +0.2 1,263,870 + +0.0 1,263,870 + -0.5 1,263,870 + +0.5 1,263,870 + +0.6 1,263,870 + -0.8 1,263,870 + +0.1 1,263,870 + +0.1 1,263,870 + +0.2 1,263,871 - -0.5 1,263,871 - +0.4 1,263,871 - +0.2 1,263,871 - +0.1 1,263,871 - -0.4 1,263,873 + -1.0 1,263,874 - +0.9 1,263,906 + +0.6 1,263,906 + -1.3
Or see this region's nucleotide sequence