Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04610 and A4249_RS04615 are separated by 110 nucleotides A4249_RS04615 and A4249_RS04620 are separated by 244 nucleotides
A4249_RS04610: A4249_RS04610 - GGDEF domain-containing protein, at 955,090 to 956,139
_RS04610
A4249_RS04615: A4249_RS04615 - DEAD/DEAH box helicase, at 956,250 to 957,815
_RS04615
A4249_RS04620: A4249_RS04620 - hypothetical protein, at 958,060 to 958,647
_RS04620
Position (kb) 956
957
958 Strain fitness (log2 ratio) -2
-1
0
1
2 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.424 kb on + strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.425 kb on - strand, within A4249_RS04610 at 955.796 kb on + strand, within A4249_RS04610 at 955.797 kb on - strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.012 kb on + strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.013 kb on - strand, within A4249_RS04610 at 956.096 kb on + strand at 956.096 kb on + strand at 956.096 kb on + strand at 956.096 kb on + strand at 956.096 kb on + strand at 956.097 kb on - strand at 956.097 kb on - strand at 956.097 kb on - strand at 956.243 kb on + strand at 956.243 kb on + strand at 956.244 kb on - strand at 956.244 kb on - strand at 956.739 kb on - strand, within A4249_RS04615 at 956.827 kb on + strand, within A4249_RS04615 at 956.827 kb on + strand, within A4249_RS04615 at 956.827 kb on + strand, within A4249_RS04615 at 956.827 kb on + strand, within A4249_RS04615 at 956.828 kb on - strand, within A4249_RS04615 at 956.828 kb on - strand, within A4249_RS04615 at 956.828 kb on - strand, within A4249_RS04615 at 956.828 kb on - strand, within A4249_RS04615 at 956.854 kb on + strand, within A4249_RS04615 at 956.854 kb on + strand, within A4249_RS04615 at 956.855 kb on - strand, within A4249_RS04615 at 956.855 kb on - strand, within A4249_RS04615 at 957.152 kb on + strand, within A4249_RS04615 at 957.152 kb on + strand, within A4249_RS04615 at 957.152 kb on + strand, within A4249_RS04615 at 957.152 kb on + strand, within A4249_RS04615 at 957.153 kb on - strand, within A4249_RS04615 at 957.153 kb on - strand, within A4249_RS04615 at 957.153 kb on - strand, within A4249_RS04615 at 957.153 kb on - strand, within A4249_RS04615 at 957.154 kb on + strand, within A4249_RS04615 at 957.154 kb on + strand, within A4249_RS04615 at 957.530 kb on - strand, within A4249_RS04615 at 957.530 kb on - strand, within A4249_RS04615 at 957.530 kb on - strand, within A4249_RS04615 at 957.847 kb on + strand at 957.847 kb on + strand at 957.847 kb on + strand at 957.847 kb on + strand at 957.848 kb on - strand at 957.848 kb on - strand at 957.922 kb on + strand at 957.922 kb on + strand at 957.922 kb on + strand at 957.922 kb on + strand at 957.923 kb on - strand at 957.923 kb on - strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.925 kb on - strand at 957.925 kb on - strand at 957.925 kb on - strand at 957.925 kb on - strand at 957.925 kb on - strand at 957.925 kb on - strand at 957.949 kb on + strand at 957.949 kb on + strand at 957.949 kb on + strand at 957.949 kb on + strand at 957.949 kb on + strand at 957.949 kb on + strand at 957.950 kb on - strand at 957.950 kb on - strand at 957.984 kb on + strand at 957.984 kb on + strand at 957.984 kb on + strand at 957.984 kb on + strand at 957.985 kb on - strand at 957.985 kb on - strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.080 kb on + strand at 958.081 kb on - strand at 958.081 kb on - strand at 958.081 kb on - strand at 958.081 kb on - strand at 958.081 kb on - strand at 958.081 kb on - strand at 958.179 kb on + strand, within A4249_RS04620 at 958.362 kb on + strand, within A4249_RS04620 at 958.363 kb on - strand, within A4249_RS04620 at 958.363 kb on - strand, within A4249_RS04620 at 958.671 kb on + strand at 958.671 kb on + strand at 958.713 kb on + strand at 958.714 kb on - strand at 958.719 kb on + strand at 958.719 kb on + strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.720 kb on - strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.739 kb on + strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.740 kb on - strand at 958.762 kb on + strand at 958.762 kb on + strand at 958.762 kb on + strand at 958.813 kb on + strand at 958.813 kb on + strand at 958.813 kb on + strand at 958.813 kb on + strand at 958.813 kb on + strand at 958.814 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 955,424 + A4249_RS04610 0.32 -0.3 955,424 + A4249_RS04610 0.32 -0.1 955,424 + A4249_RS04610 0.32 +0.4 955,424 + A4249_RS04610 0.32 +2.1 955,424 + A4249_RS04610 0.32 +1.2 955,424 + A4249_RS04610 0.32 +0.2 955,424 + A4249_RS04610 0.32 +0.9 955,424 + A4249_RS04610 0.32 -0.0 955,424 + A4249_RS04610 0.32 +0.2 955,425 - A4249_RS04610 0.32 -0.4 955,425 - A4249_RS04610 0.32 +0.6 955,425 - A4249_RS04610 0.32 -0.3 955,425 - A4249_RS04610 0.32 +0.4 955,425 - A4249_RS04610 0.32 -1.8 955,425 - A4249_RS04610 0.32 +0.2 955,425 - A4249_RS04610 0.32 +0.0 955,425 - A4249_RS04610 0.32 -0.3 955,425 - A4249_RS04610 0.32 -1.3 955,796 + A4249_RS04610 0.67 +0.6 955,797 - A4249_RS04610 0.67 +1.4 956,012 + A4249_RS04610 0.88 -0.1 956,012 + A4249_RS04610 0.88 +1.2 956,012 + A4249_RS04610 0.88 -0.4 956,012 + A4249_RS04610 0.88 +0.6 956,012 + A4249_RS04610 0.88 +0.5 956,012 + A4249_RS04610 0.88 -0.3 956,012 + A4249_RS04610 0.88 -0.5 956,012 + A4249_RS04610 0.88 -0.4 956,012 + A4249_RS04610 0.88 +2.0 956,012 + A4249_RS04610 0.88 -1.5 956,012 + A4249_RS04610 0.88 -0.4 956,012 + A4249_RS04610 0.88 +0.5 956,012 + A4249_RS04610 0.88 -0.5 956,013 - A4249_RS04610 0.88 -1.0 956,013 - A4249_RS04610 0.88 -1.2 956,013 - A4249_RS04610 0.88 +0.7 956,013 - A4249_RS04610 0.88 -2.5 956,013 - A4249_RS04610 0.88 +1.5 956,013 - A4249_RS04610 0.88 +1.2 956,013 - A4249_RS04610 0.88 +0.8 956,013 - A4249_RS04610 0.88 -0.2 956,013 - A4249_RS04610 0.88 -1.0 956,013 - A4249_RS04610 0.88 -1.3 956,096 + +0.8 956,096 + -0.2 956,096 + -0.2 956,096 + +0.1 956,096 + -0.7 956,097 - -1.3 956,097 - -0.1 956,097 - +0.0 956,243 + +0.1 956,243 + -0.6 956,244 - -0.5 956,244 - +0.5 956,739 - A4249_RS04615 0.31 -0.7 956,827 + A4249_RS04615 0.37 -0.3 956,827 + A4249_RS04615 0.37 -0.5 956,827 + A4249_RS04615 0.37 +1.6 956,827 + A4249_RS04615 0.37 -0.9 956,828 - A4249_RS04615 0.37 +0.4 956,828 - A4249_RS04615 0.37 +0.8 956,828 - A4249_RS04615 0.37 -1.9 956,828 - A4249_RS04615 0.37 -2.3 956,854 + A4249_RS04615 0.39 +0.7 956,854 + A4249_RS04615 0.39 +0.8 956,855 - A4249_RS04615 0.39 -0.5 956,855 - A4249_RS04615 0.39 -0.0 957,152 + A4249_RS04615 0.58 +0.1 957,152 + A4249_RS04615 0.58 -0.0 957,152 + A4249_RS04615 0.58 +0.8 957,152 + A4249_RS04615 0.58 +0.3 957,153 - A4249_RS04615 0.58 -1.8 957,153 - A4249_RS04615 0.58 -0.0 957,153 - A4249_RS04615 0.58 +0.3 957,153 - A4249_RS04615 0.58 -0.9 957,154 + A4249_RS04615 0.58 -1.0 957,154 + A4249_RS04615 0.58 -1.5 957,530 - A4249_RS04615 0.82 -0.2 957,530 - A4249_RS04615 0.82 -0.5 957,530 - A4249_RS04615 0.82 +1.7 957,847 + +0.2 957,847 + +0.1 957,847 + -0.4 957,847 + -0.7 957,848 - -0.0 957,848 - -1.2 957,922 + -0.1 957,922 + -0.5 957,922 + -0.2 957,922 + -1.6 957,923 - -2.3 957,923 - +1.3 957,924 + -0.8 957,924 + +0.1 957,924 + +0.9 957,924 + -0.7 957,924 + +0.7 957,924 + +0.2 957,924 + +0.1 957,924 + -0.5 957,925 - -0.9 957,925 - -0.7 957,925 - -0.2 957,925 - -0.3 957,925 - -1.3 957,925 - -0.7 957,949 + +0.1 957,949 + +0.7 957,949 + +1.4 957,949 + +1.3 957,949 + -0.9 957,949 + +0.1 957,950 - -0.2 957,950 - -0.1 957,984 + -1.7 957,984 + -0.6 957,984 + -0.2 957,984 + +0.3 957,985 - +1.4 957,985 - +0.0 958,080 + +1.2 958,080 + -0.5 958,080 + -0.9 958,080 + +0.7 958,080 + +1.6 958,080 + +0.7 958,080 + -0.4 958,080 + +0.5 958,081 - -0.4 958,081 - +0.0 958,081 - -0.3 958,081 - -1.3 958,081 - +0.6 958,081 - -0.4 958,179 + A4249_RS04620 0.20 -2.2 958,362 + A4249_RS04620 0.51 +1.4 958,363 - A4249_RS04620 0.52 +0.6 958,363 - A4249_RS04620 0.52 +1.2 958,671 + +0.2 958,671 + +0.9 958,713 + +0.2 958,714 - +1.1 958,719 + +0.0 958,719 + -1.5 958,720 - -0.3 958,720 - -0.9 958,720 - -0.2 958,720 - +0.7 958,720 - -0.1 958,720 - +2.0 958,720 - +0.2 958,720 - -2.2 958,720 - -0.1 958,720 - -1.7 958,720 - +0.4 958,720 - +1.4 958,720 - +0.3 958,720 - +0.4 958,739 + +0.2 958,739 + +0.3 958,739 + +0.4 958,739 + -0.7 958,739 + -0.0 958,739 + -0.6 958,739 + -0.6 958,739 + -0.0 958,739 + +0.5 958,739 + -0.9 958,740 - +1.8 958,740 - -0.9 958,740 - +0.0 958,740 - +1.4 958,740 - -1.7 958,740 - -2.0 958,740 - +0.8 958,740 - +0.4 958,740 - -0.8 958,740 - -0.0 958,762 + +0.7 958,762 + -0.9 958,762 + +0.9 958,813 + -0.4 958,813 + +0.7 958,813 + -2.2 958,813 + -0.4 958,813 + -1.0 958,814 - -0.9
Or see this region's nucleotide sequence