Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04350 and A4249_RS04355 are separated by 11 nucleotides A4249_RS04355 and A4249_RS04360 are separated by 138 nucleotides A4249_RS04360 and A4249_RS04365 are separated by 98 nucleotides
A4249_RS04350: A4249_RS04350 - lipopolysaccharide biosynthesis protein, at 900,498 to 901,943
_RS04350
A4249_RS04355: A4249_RS04355 - exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase, at 901,955 to 903,439
_RS04355
A4249_RS04360: A4249_RS04360 - tRNA-Ser, at 903,578 to 903,669
_RS04360
A4249_RS04365: A4249_RS04365 - fatty acid desaturase, at 903,768 to 904,493
_RS04365
Position (kb) 901
902
903
904 Strain fitness (log2 ratio) -2
-1
0
1
2 at 901.204 kb on + strand, within A4249_RS04350 at 901.205 kb on - strand, within A4249_RS04350 at 901.205 kb on - strand, within A4249_RS04350 at 901.205 kb on - strand, within A4249_RS04350 at 901.318 kb on + strand, within A4249_RS04350 at 901.327 kb on + strand, within A4249_RS04350 at 901.327 kb on + strand, within A4249_RS04350 at 901.328 kb on - strand, within A4249_RS04350 at 901.479 kb on + strand, within A4249_RS04350 at 901.700 kb on - strand, within A4249_RS04350 at 901.918 kb on + strand at 901.919 kb on - strand at 901.919 kb on - strand at 901.919 kb on - strand at 901.919 kb on - strand at 901.993 kb on + strand at 901.994 kb on - strand at 901.994 kb on - strand at 902.041 kb on + strand at 902.041 kb on + strand at 902.043 kb on + strand at 902.043 kb on + strand at 902.043 kb on + strand at 902.043 kb on + strand at 902.043 kb on + strand at 902.044 kb on - strand at 902.044 kb on - strand at 902.044 kb on - strand at 902.044 kb on - strand at 902.044 kb on - strand at 902.044 kb on - strand at 902.044 kb on - strand at 902.160 kb on + strand, within A4249_RS04355 at 902.160 kb on + strand, within A4249_RS04355 at 902.161 kb on - strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.401 kb on + strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.402 kb on - strand, within A4249_RS04355 at 902.526 kb on - strand, within A4249_RS04355 at 902.526 kb on - strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.723 kb on + strand, within A4249_RS04355 at 902.724 kb on - strand, within A4249_RS04355 at 902.724 kb on - strand, within A4249_RS04355 at 902.724 kb on - strand, within A4249_RS04355 at 902.748 kb on + strand, within A4249_RS04355 at 902.748 kb on + strand, within A4249_RS04355 at 902.748 kb on + strand, within A4249_RS04355 at 902.749 kb on - strand, within A4249_RS04355 at 902.749 kb on - strand, within A4249_RS04355 at 902.749 kb on - strand, within A4249_RS04355 at 902.749 kb on - strand, within A4249_RS04355 at 903.153 kb on + strand, within A4249_RS04355 at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.312 kb on + strand at 903.313 kb on - strand at 903.313 kb on - strand at 903.483 kb on + strand at 903.484 kb on - strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.501 kb on + strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.502 kb on - strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.682 kb on + strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.683 kb on - strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.684 kb on + strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.685 kb on - strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.735 kb on + strand at 903.769 kb on + strand at 903.769 kb on + strand at 903.769 kb on + strand at 903.770 kb on - strand at 903.770 kb on - strand at 903.770 kb on - strand at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.917 kb on + strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.918 kb on - strand, within A4249_RS04365 at 903.951 kb on + strand, within A4249_RS04365 at 903.999 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.001 kb on + strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.002 kb on - strand, within A4249_RS04365 at 904.072 kb on + strand, within A4249_RS04365 at 904.072 kb on + strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.073 kb on - strand, within A4249_RS04365 at 904.090 kb on + strand, within A4249_RS04365 at 904.090 kb on + strand, within A4249_RS04365 at 904.090 kb on + strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.091 kb on - strand, within A4249_RS04365 at 904.113 kb on - strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.210 kb on + strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.211 kb on - strand, within A4249_RS04365 at 904.381 kb on + strand, within A4249_RS04365 at 904.382 kb on - strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.390 kb on + strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.391 kb on - strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.394 kb on + strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365 at 904.395 kb on - strand, within A4249_RS04365
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 901,204 + A4249_RS04350 0.49 -0.7 901,205 - A4249_RS04350 0.49 +1.3 901,205 - A4249_RS04350 0.49 +0.8 901,205 - A4249_RS04350 0.49 -0.5 901,318 + A4249_RS04350 0.57 -0.2 901,327 + A4249_RS04350 0.57 +0.4 901,327 + A4249_RS04350 0.57 +0.5 901,328 - A4249_RS04350 0.57 +2.2 901,479 + A4249_RS04350 0.68 +1.8 901,700 - A4249_RS04350 0.83 +0.9 901,918 + -0.5 901,919 - +1.7 901,919 - -0.3 901,919 - +2.4 901,919 - +0.3 901,993 + +0.2 901,994 - +0.1 901,994 - -0.9 902,041 + -0.0 902,041 + -0.6 902,043 + -0.2 902,043 + +0.0 902,043 + -1.2 902,043 + -1.3 902,043 + -0.1 902,044 - -0.0 902,044 - -0.7 902,044 - -2.3 902,044 - -0.4 902,044 - -0.6 902,044 - +1.2 902,044 - -1.6 902,160 + A4249_RS04355 0.14 -0.1 902,160 + A4249_RS04355 0.14 -0.3 902,161 - A4249_RS04355 0.14 -1.1 902,401 + A4249_RS04355 0.30 -0.7 902,401 + A4249_RS04355 0.30 +0.5 902,401 + A4249_RS04355 0.30 +0.2 902,401 + A4249_RS04355 0.30 -0.5 902,401 + A4249_RS04355 0.30 -0.5 902,401 + A4249_RS04355 0.30 -0.7 902,401 + A4249_RS04355 0.30 -1.2 902,401 + A4249_RS04355 0.30 +0.8 902,401 + A4249_RS04355 0.30 +1.0 902,401 + A4249_RS04355 0.30 -1.2 902,402 - A4249_RS04355 0.30 +0.1 902,402 - A4249_RS04355 0.30 +0.1 902,402 - A4249_RS04355 0.30 +0.7 902,402 - A4249_RS04355 0.30 -0.0 902,402 - A4249_RS04355 0.30 +0.1 902,402 - A4249_RS04355 0.30 -0.7 902,402 - A4249_RS04355 0.30 -0.9 902,402 - A4249_RS04355 0.30 -1.8 902,402 - A4249_RS04355 0.30 -0.7 902,526 - A4249_RS04355 0.38 -0.4 902,526 - A4249_RS04355 0.38 -1.6 902,723 + A4249_RS04355 0.52 -0.0 902,723 + A4249_RS04355 0.52 +0.3 902,723 + A4249_RS04355 0.52 -0.0 902,723 + A4249_RS04355 0.52 +0.3 902,723 + A4249_RS04355 0.52 -1.0 902,723 + A4249_RS04355 0.52 -0.7 902,723 + A4249_RS04355 0.52 -1.2 902,724 - A4249_RS04355 0.52 -2.1 902,724 - A4249_RS04355 0.52 -0.1 902,724 - A4249_RS04355 0.52 -1.1 902,748 + A4249_RS04355 0.53 -0.5 902,748 + A4249_RS04355 0.53 -0.8 902,748 + A4249_RS04355 0.53 -0.1 902,749 - A4249_RS04355 0.53 +0.2 902,749 - A4249_RS04355 0.53 +0.3 902,749 - A4249_RS04355 0.53 +1.0 902,749 - A4249_RS04355 0.53 +1.2 903,153 + A4249_RS04355 0.81 -0.2 903,312 + +0.4 903,312 + -0.3 903,312 + -0.8 903,312 + +0.3 903,312 + +0.9 903,312 + -0.5 903,312 + -0.4 903,313 - +0.1 903,313 - +0.2 903,483 + -0.7 903,484 - -0.4 903,501 + -1.0 903,501 + -0.4 903,501 + -0.5 903,501 + +0.8 903,501 + -0.1 903,501 + -1.1 903,501 + -1.1 903,501 + +0.1 903,501 + -1.5 903,502 - -0.5 903,502 - +0.2 903,502 - -0.0 903,502 - +0.8 903,502 - +0.6 903,502 - +0.3 903,502 - -0.9 903,502 - -0.0 903,682 + -0.5 903,682 + -0.6 903,682 + -1.2 903,682 + +1.9 903,682 + +0.1 903,682 + +0.1 903,682 + -0.2 903,683 - -0.2 903,683 - +0.2 903,683 - +0.5 903,683 - +0.8 903,683 - +1.0 903,683 - -0.2 903,683 - -1.0 903,683 - +1.2 903,683 - -1.2 903,684 + +0.6 903,684 + -0.4 903,684 + -0.0 903,684 + -1.1 903,684 + -1.1 903,684 + -1.4 903,684 + -1.6 903,684 + -0.5 903,684 + -2.0 903,684 + +0.7 903,684 + +0.6 903,684 + -0.8 903,685 - -0.7 903,685 - -1.0 903,685 - +0.9 903,685 - +0.8 903,685 - -0.0 903,685 - -0.9 903,685 - -0.6 903,735 + -0.3 903,735 + +0.7 903,735 + -1.3 903,735 + -0.4 903,735 + -0.6 903,769 + -1.1 903,769 + -0.7 903,769 + +0.6 903,770 - -0.5 903,770 - -2.5 903,770 - -1.9 903,917 + A4249_RS04365 0.21 +0.2 903,917 + A4249_RS04365 0.21 -0.7 903,917 + A4249_RS04365 0.21 +0.3 903,917 + A4249_RS04365 0.21 -0.7 903,917 + A4249_RS04365 0.21 -2.4 903,918 - A4249_RS04365 0.21 -1.8 903,918 - A4249_RS04365 0.21 +0.3 903,918 - A4249_RS04365 0.21 -0.4 903,918 - A4249_RS04365 0.21 -0.3 903,951 + A4249_RS04365 0.25 +0.8 903,999 + A4249_RS04365 0.32 +0.2 904,001 + A4249_RS04365 0.32 -0.1 904,001 + A4249_RS04365 0.32 -0.0 904,001 + A4249_RS04365 0.32 -0.8 904,001 + A4249_RS04365 0.32 -0.3 904,001 + A4249_RS04365 0.32 -0.5 904,002 - A4249_RS04365 0.32 -0.6 904,002 - A4249_RS04365 0.32 +0.3 904,002 - A4249_RS04365 0.32 +1.1 904,002 - A4249_RS04365 0.32 -0.6 904,072 + A4249_RS04365 0.42 +0.2 904,072 + A4249_RS04365 0.42 -0.5 904,073 - A4249_RS04365 0.42 +1.3 904,073 - A4249_RS04365 0.42 -0.1 904,073 - A4249_RS04365 0.42 +0.5 904,073 - A4249_RS04365 0.42 -1.5 904,090 + A4249_RS04365 0.44 -0.0 904,090 + A4249_RS04365 0.44 +0.8 904,090 + A4249_RS04365 0.44 -0.2 904,091 - A4249_RS04365 0.44 +1.4 904,091 - A4249_RS04365 0.44 -0.7 904,091 - A4249_RS04365 0.44 +0.6 904,091 - A4249_RS04365 0.44 -0.8 904,113 - A4249_RS04365 0.48 -0.8 904,210 + A4249_RS04365 0.61 -0.6 904,210 + A4249_RS04365 0.61 -1.2 904,210 + A4249_RS04365 0.61 -0.6 904,210 + A4249_RS04365 0.61 -0.7 904,210 + A4249_RS04365 0.61 -0.7 904,211 - A4249_RS04365 0.61 -0.2 904,211 - A4249_RS04365 0.61 -0.8 904,211 - A4249_RS04365 0.61 -0.2 904,211 - A4249_RS04365 0.61 +0.7 904,211 - A4249_RS04365 0.61 -0.2 904,211 - A4249_RS04365 0.61 -0.4 904,381 + A4249_RS04365 0.84 -1.1 904,382 - A4249_RS04365 0.85 +0.7 904,390 + A4249_RS04365 0.86 +0.6 904,390 + A4249_RS04365 0.86 -0.8 904,390 + A4249_RS04365 0.86 +0.3 904,390 + A4249_RS04365 0.86 +0.2 904,390 + A4249_RS04365 0.86 -0.3 904,390 + A4249_RS04365 0.86 -2.0 904,390 + A4249_RS04365 0.86 -0.0 904,390 + A4249_RS04365 0.86 -0.3 904,390 + A4249_RS04365 0.86 +0.6 904,391 - A4249_RS04365 0.86 -1.5 904,391 - A4249_RS04365 0.86 -0.7 904,391 - A4249_RS04365 0.86 -1.2 904,391 - A4249_RS04365 0.86 -0.7 904,391 - A4249_RS04365 0.86 +0.2 904,391 - A4249_RS04365 0.86 -0.3 904,391 - A4249_RS04365 0.86 +0.1 904,391 - A4249_RS04365 0.86 -0.7 904,391 - A4249_RS04365 0.86 -1.3 904,391 - A4249_RS04365 0.86 -0.5 904,391 - A4249_RS04365 0.86 -0.6 904,394 + A4249_RS04365 0.86 -0.4 904,394 + A4249_RS04365 0.86 +0.9 904,394 + A4249_RS04365 0.86 -0.9 904,394 + A4249_RS04365 0.86 +0.0 904,394 + A4249_RS04365 0.86 +1.1 904,394 + A4249_RS04365 0.86 -0.4 904,394 + A4249_RS04365 0.86 -0.2 904,394 + A4249_RS04365 0.86 +0.3 904,394 + A4249_RS04365 0.86 +0.6 904,395 - A4249_RS04365 0.86 -1.7 904,395 - A4249_RS04365 0.86 +0.4 904,395 - A4249_RS04365 0.86 -1.2 904,395 - A4249_RS04365 0.86 -0.6 904,395 - A4249_RS04365 0.86 -0.0 904,395 - A4249_RS04365 0.86 -0.5 904,395 - A4249_RS04365 0.86 -0.0 904,395 - A4249_RS04365 0.86 -0.5
Or see this region's nucleotide sequence