Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03845

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03835 and A4249_RS03840 are separated by 0 nucleotidesA4249_RS03840 and A4249_RS03845 overlap by 4 nucleotidesA4249_RS03845 and A4249_RS03850 are separated by 31 nucleotides A4249_RS03835: A4249_RS03835 - 2OG-Fe(II) oxygenase family protein, at 810,664 to 811,377 _RS03835 A4249_RS03840: A4249_RS03840 - rhodanese-like domain-containing protein, at 811,378 to 811,716 _RS03840 A4249_RS03845: A4249_RS03845 - TerC family protein, at 811,713 to 812,519 _RS03845 A4249_RS03850: A4249_RS03850 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 812,551 to 813,435 _RS03850 Position (kb) 811 812 813Strain fitness (log2 ratio) -2 -1 0 1at 810.808 kb on + strand, within A4249_RS03835at 810.809 kb on - strand, within A4249_RS03835at 810.809 kb on - strand, within A4249_RS03835at 810.809 kb on - strand, within A4249_RS03835at 810.937 kb on + strand, within A4249_RS03835at 810.937 kb on + strand, within A4249_RS03835at 810.937 kb on + strand, within A4249_RS03835at 810.937 kb on + strand, within A4249_RS03835at 810.937 kb on + strand, within A4249_RS03835at 810.937 kb on + strand, within A4249_RS03835at 810.938 kb on - strand, within A4249_RS03835at 810.938 kb on - strand, within A4249_RS03835at 810.943 kb on + strand, within A4249_RS03835at 810.943 kb on + strand, within A4249_RS03835at 810.943 kb on + strand, within A4249_RS03835at 810.943 kb on + strand, within A4249_RS03835at 810.961 kb on + strand, within A4249_RS03835at 810.961 kb on + strand, within A4249_RS03835at 810.962 kb on - strand, within A4249_RS03835at 810.962 kb on - strand, within A4249_RS03835at 810.962 kb on - strand, within A4249_RS03835at 810.962 kb on - strand, within A4249_RS03835at 811.168 kb on + strand, within A4249_RS03835at 811.168 kb on + strand, within A4249_RS03835at 811.168 kb on + strand, within A4249_RS03835at 811.168 kb on + strand, within A4249_RS03835at 811.168 kb on + strand, within A4249_RS03835at 811.169 kb on - strand, within A4249_RS03835at 811.169 kb on - strand, within A4249_RS03835at 811.169 kb on - strand, within A4249_RS03835at 811.169 kb on - strand, within A4249_RS03835at 811.169 kb on - strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.257 kb on + strand, within A4249_RS03835at 811.258 kb on - strand, within A4249_RS03835at 811.258 kb on - strand, within A4249_RS03835at 811.903 kb on + strand, within A4249_RS03845at 811.903 kb on + strand, within A4249_RS03845at 811.904 kb on - strand, within A4249_RS03845at 812.177 kb on + strand, within A4249_RS03845at 812.177 kb on + strand, within A4249_RS03845at 812.178 kb on - strand, within A4249_RS03845at 812.178 kb on - strand, within A4249_RS03845at 812.531 kb on - strandat 812.579 kb on + strandat 812.579 kb on + strandat 812.579 kb on + strandat 812.580 kb on + strandat 812.580 kb on - strandat 813.405 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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810,808 + A4249_RS03835 0.20 +0.2
810,809 - A4249_RS03835 0.20 +0.3
810,809 - A4249_RS03835 0.20 -0.4
810,809 - A4249_RS03835 0.20 +0.6
810,937 + A4249_RS03835 0.38 -1.3
810,937 + A4249_RS03835 0.38 -0.0
810,937 + A4249_RS03835 0.38 +0.4
810,937 + A4249_RS03835 0.38 +0.2
810,937 + A4249_RS03835 0.38 +0.5
810,937 + A4249_RS03835 0.38 -0.3
810,938 - A4249_RS03835 0.38 -0.4
810,938 - A4249_RS03835 0.38 -0.8
810,943 + A4249_RS03835 0.39 -0.2
810,943 + A4249_RS03835 0.39 -0.2
810,943 + A4249_RS03835 0.39 -1.3
810,943 + A4249_RS03835 0.39 +0.6
810,961 + A4249_RS03835 0.42 +1.3
810,961 + A4249_RS03835 0.42 -0.4
810,962 - A4249_RS03835 0.42 -0.5
810,962 - A4249_RS03835 0.42 -0.4
810,962 - A4249_RS03835 0.42 -0.5
810,962 - A4249_RS03835 0.42 -0.4
811,168 + A4249_RS03835 0.71 -0.8
811,168 + A4249_RS03835 0.71 +0.4
811,168 + A4249_RS03835 0.71 -0.4
811,168 + A4249_RS03835 0.71 -1.6
811,168 + A4249_RS03835 0.71 +1.7
811,169 - A4249_RS03835 0.71 +1.1
811,169 - A4249_RS03835 0.71 -0.5
811,169 - A4249_RS03835 0.71 -2.7
811,169 - A4249_RS03835 0.71 -2.1
811,169 - A4249_RS03835 0.71 -0.4
811,257 + A4249_RS03835 0.83 +0.4
811,257 + A4249_RS03835 0.83 +0.3
811,257 + A4249_RS03835 0.83 -2.2
811,257 + A4249_RS03835 0.83 +0.0
811,257 + A4249_RS03835 0.83 +0.4
811,257 + A4249_RS03835 0.83 +0.2
811,257 + A4249_RS03835 0.83 +0.2
811,258 - A4249_RS03835 0.83 +0.8
811,258 - A4249_RS03835 0.83 -0.3
811,903 + A4249_RS03845 0.24 +0.2
811,903 + A4249_RS03845 0.24 -0.2
811,904 - A4249_RS03845 0.24 +1.4
812,177 + A4249_RS03845 0.57 +0.1
812,177 + A4249_RS03845 0.57 -0.1
812,178 - A4249_RS03845 0.58 -0.8
812,178 - A4249_RS03845 0.58 -1.6
812,531 - -0.8
812,579 + -1.5
812,579 + -1.2
812,579 + -0.9
812,580 + +0.9
812,580 - +0.3
813,405 + +1.0

Or see this region's nucleotide sequence