Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03105

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03100 and A4249_RS03105 are separated by 163 nucleotidesA4249_RS03105 and A4249_RS03110 are separated by 54 nucleotidesA4249_RS03110 and A4249_RS03115 overlap by 4 nucleotides A4249_RS03100: A4249_RS03100 - cytochrome P450, at 655,819 to 657,078 _RS03100 A4249_RS03105: A4249_RS03105 - helix-turn-helix domain-containing protein, at 657,242 to 657,676 _RS03105 A4249_RS03110: A4249_RS03110 - MAPEG family protein, at 657,731 to 658,273 _RS03110 A4249_RS03115: A4249_RS03115 - signal peptidase II, at 658,270 to 658,794 _RS03115 Position (kb) 657 658Strain fitness (log2 ratio) -2 -1 0 1at 656.331 kb on + strand, within A4249_RS03100at 656.331 kb on + strand, within A4249_RS03100at 656.331 kb on + strand, within A4249_RS03100at 656.332 kb on - strand, within A4249_RS03100at 656.332 kb on - strand, within A4249_RS03100at 656.332 kb on - strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.438 kb on + strand, within A4249_RS03100at 656.528 kb on + strand, within A4249_RS03100at 656.529 kb on - strand, within A4249_RS03100at 656.678 kb on + strand, within A4249_RS03100at 656.678 kb on + strand, within A4249_RS03100at 656.678 kb on + strand, within A4249_RS03100at 656.679 kb on - strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.775 kb on + strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.776 kb on - strand, within A4249_RS03100at 656.906 kb on + strand, within A4249_RS03100at 656.906 kb on + strand, within A4249_RS03100at 656.906 kb on + strand, within A4249_RS03100at 656.906 kb on + strand, within A4249_RS03100at 656.907 kb on - strand, within A4249_RS03100at 656.907 kb on - strand, within A4249_RS03100at 657.018 kb on - strandat 657.018 kb on - strandat 657.125 kb on - strandat 657.364 kb on + strand, within A4249_RS03105at 657.364 kb on + strand, within A4249_RS03105at 657.364 kb on + strand, within A4249_RS03105at 657.364 kb on + strand, within A4249_RS03105at 657.364 kb on + strand, within A4249_RS03105at 657.364 kb on + strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.365 kb on - strand, within A4249_RS03105at 657.528 kb on + strand, within A4249_RS03105at 657.528 kb on + strand, within A4249_RS03105at 657.528 kb on + strand, within A4249_RS03105at 657.529 kb on - strand, within A4249_RS03105at 657.529 kb on - strand, within A4249_RS03105at 657.529 kb on - strand, within A4249_RS03105at 657.586 kb on - strand, within A4249_RS03105at 657.586 kb on - strand, within A4249_RS03105at 657.586 kb on - strand, within A4249_RS03105at 657.586 kb on - strand, within A4249_RS03105at 657.586 kb on - strand, within A4249_RS03105at 657.834 kb on + strand, within A4249_RS03110at 657.834 kb on + strand, within A4249_RS03110at 657.835 kb on - strand, within A4249_RS03110at 657.867 kb on + strand, within A4249_RS03110at 657.867 kb on + strand, within A4249_RS03110at 657.868 kb on - strand, within A4249_RS03110at 658.017 kb on + strand, within A4249_RS03110at 658.122 kb on + strand, within A4249_RS03110at 658.185 kb on - strand, within A4249_RS03110at 658.185 kb on - strand, within A4249_RS03110at 658.515 kb on + strand, within A4249_RS03115at 658.515 kb on + strand, within A4249_RS03115

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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656,331 + A4249_RS03100 0.41 -1.0
656,331 + A4249_RS03100 0.41 -0.1
656,331 + A4249_RS03100 0.41 +0.2
656,332 - A4249_RS03100 0.41 +0.4
656,332 - A4249_RS03100 0.41 -0.3
656,332 - A4249_RS03100 0.41 +0.0
656,333 + A4249_RS03100 0.41 +1.2
656,333 + A4249_RS03100 0.41 +0.5
656,333 + A4249_RS03100 0.41 +0.7
656,333 + A4249_RS03100 0.41 -1.5
656,333 + A4249_RS03100 0.41 -0.0
656,333 + A4249_RS03100 0.41 +0.2
656,333 + A4249_RS03100 0.41 -1.0
656,333 + A4249_RS03100 0.41 -0.4
656,333 + A4249_RS03100 0.41 -0.4
656,333 + A4249_RS03100 0.41 +0.1
656,333 + A4249_RS03100 0.41 +0.7
656,334 - A4249_RS03100 0.41 +0.1
656,334 - A4249_RS03100 0.41 -1.2
656,334 - A4249_RS03100 0.41 -2.1
656,334 - A4249_RS03100 0.41 +0.1
656,334 - A4249_RS03100 0.41 +1.2
656,334 - A4249_RS03100 0.41 +0.8
656,334 - A4249_RS03100 0.41 -0.2
656,334 - A4249_RS03100 0.41 -0.1
656,334 - A4249_RS03100 0.41 +0.1
656,438 + A4249_RS03100 0.49 +0.2
656,528 + A4249_RS03100 0.56 -0.5
656,529 - A4249_RS03100 0.56 -0.4
656,678 + A4249_RS03100 0.68 -0.5
656,678 + A4249_RS03100 0.68 +1.4
656,678 + A4249_RS03100 0.68 -1.4
656,679 - A4249_RS03100 0.68 -0.1
656,775 + A4249_RS03100 0.76 -0.7
656,775 + A4249_RS03100 0.76 -1.5
656,775 + A4249_RS03100 0.76 +0.4
656,775 + A4249_RS03100 0.76 +0.9
656,775 + A4249_RS03100 0.76 -0.9
656,775 + A4249_RS03100 0.76 -0.3
656,775 + A4249_RS03100 0.76 -0.8
656,775 + A4249_RS03100 0.76 +0.2
656,775 + A4249_RS03100 0.76 -0.1
656,776 - A4249_RS03100 0.76 -0.2
656,776 - A4249_RS03100 0.76 +0.2
656,776 - A4249_RS03100 0.76 +1.4
656,776 - A4249_RS03100 0.76 -1.0
656,776 - A4249_RS03100 0.76 +0.9
656,776 - A4249_RS03100 0.76 +0.5
656,776 - A4249_RS03100 0.76 +0.0
656,776 - A4249_RS03100 0.76 +0.8
656,776 - A4249_RS03100 0.76 -0.6
656,776 - A4249_RS03100 0.76 +0.6
656,776 - A4249_RS03100 0.76 +0.3
656,776 - A4249_RS03100 0.76 -0.2
656,776 - A4249_RS03100 0.76 -0.8
656,906 + A4249_RS03100 0.86 -0.8
656,906 + A4249_RS03100 0.86 -0.4
656,906 + A4249_RS03100 0.86 +1.3
656,906 + A4249_RS03100 0.86 -0.8
656,907 - A4249_RS03100 0.86 -0.5
656,907 - A4249_RS03100 0.86 -1.1
657,018 - -0.3
657,018 - +0.1
657,125 - +0.4
657,364 + A4249_RS03105 0.28 +0.2
657,364 + A4249_RS03105 0.28 +0.4
657,364 + A4249_RS03105 0.28 -0.8
657,364 + A4249_RS03105 0.28 -0.6
657,364 + A4249_RS03105 0.28 -0.6
657,364 + A4249_RS03105 0.28 -0.6
657,365 - A4249_RS03105 0.28 -0.2
657,365 - A4249_RS03105 0.28 +0.6
657,365 - A4249_RS03105 0.28 -0.1
657,365 - A4249_RS03105 0.28 -0.7
657,365 - A4249_RS03105 0.28 -0.9
657,365 - A4249_RS03105 0.28 +1.4
657,365 - A4249_RS03105 0.28 -1.1
657,365 - A4249_RS03105 0.28 +0.4
657,365 - A4249_RS03105 0.28 +1.1
657,528 + A4249_RS03105 0.66 -0.1
657,528 + A4249_RS03105 0.66 -0.4
657,528 + A4249_RS03105 0.66 -1.6
657,529 - A4249_RS03105 0.66 -0.7
657,529 - A4249_RS03105 0.66 -0.6
657,529 - A4249_RS03105 0.66 -0.5
657,586 - A4249_RS03105 0.79 +0.0
657,586 - A4249_RS03105 0.79 -0.1
657,586 - A4249_RS03105 0.79 -1.0
657,586 - A4249_RS03105 0.79 +0.5
657,586 - A4249_RS03105 0.79 -0.4
657,834 + A4249_RS03110 0.19 -1.0
657,834 + A4249_RS03110 0.19 -0.1
657,835 - A4249_RS03110 0.19 +0.3
657,867 + A4249_RS03110 0.25 -0.2
657,867 + A4249_RS03110 0.25 -0.1
657,868 - A4249_RS03110 0.25 +0.6
658,017 + A4249_RS03110 0.53 -0.5
658,122 + A4249_RS03110 0.72 -0.7
658,185 - A4249_RS03110 0.84 -0.5
658,185 - A4249_RS03110 0.84 +0.4
658,515 + A4249_RS03115 0.47 -0.4
658,515 + A4249_RS03115 0.47 +1.7

Or see this region's nucleotide sequence