Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03095

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03090 and A4249_RS03095 are separated by 171 nucleotidesA4249_RS03095 and A4249_RS03100 are separated by 72 nucleotides A4249_RS03090: A4249_RS03090 - cytochrome c/FTR1 family iron permease, at 652,243 to 654,174 _RS03090 A4249_RS03095: A4249_RS03095 - dihydrolipoyl dehydrogenase, at 654,346 to 655,746 _RS03095 A4249_RS03100: A4249_RS03100 - cytochrome P450, at 655,819 to 657,078 _RS03100 Position (kb) 654 655 656Strain fitness (log2 ratio) -3 -2 -1 0 1at 653.369 kb on + strand, within A4249_RS03090at 653.370 kb on - strand, within A4249_RS03090at 653.370 kb on - strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.627 kb on + strand, within A4249_RS03090at 653.627 kb on + strand, within A4249_RS03090at 653.628 kb on - strand, within A4249_RS03090at 653.628 kb on - strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.816 kb on + strand, within A4249_RS03090at 653.999 kb on + strandat 654.000 kb on - strandat 654.059 kb on + strandat 654.059 kb on + strandat 654.059 kb on + strandat 654.059 kb on + strandat 654.060 kb on - strandat 654.060 kb on - strandat 654.060 kb on - strandat 654.233 kb on + strandat 654.257 kb on - strandat 654.274 kb on + strandat 654.275 kb on - strandat 654.348 kb on - strandat 654.626 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.693 kb on - strand, within A4249_RS03095at 654.693 kb on - strand, within A4249_RS03095at 654.716 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 655.199 kb on + strand, within A4249_RS03095at 655.199 kb on + strand, within A4249_RS03095at 655.199 kb on + strand, within A4249_RS03095at 655.200 kb on - strand, within A4249_RS03095at 655.200 kb on - strand, within A4249_RS03095at 655.449 kb on - strand, within A4249_RS03095at 655.723 kb on + strandat 655.724 kb on - strandat 655.724 kb on - strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.736 kb on + strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.737 kb on - strandat 655.773 kb on + strandat 655.773 kb on + strandat 655.773 kb on + strandat 655.774 kb on - strandat 655.774 kb on - strandat 655.774 kb on - strandat 655.774 kb on - strandat 655.774 kb on - strandat 655.932 kb on - strandat 656.129 kb on + strand, within A4249_RS03100at 656.129 kb on + strand, within A4249_RS03100at 656.129 kb on + strand, within A4249_RS03100at 656.130 kb on - strand, within A4249_RS03100at 656.130 kb on - strand, within A4249_RS03100at 656.130 kb on - strand, within A4249_RS03100at 656.225 kb on + strand, within A4249_RS03100at 656.225 kb on + strand, within A4249_RS03100at 656.226 kb on - strand, within A4249_RS03100at 656.331 kb on + strand, within A4249_RS03100at 656.331 kb on + strand, within A4249_RS03100at 656.331 kb on + strand, within A4249_RS03100at 656.332 kb on - strand, within A4249_RS03100at 656.332 kb on - strand, within A4249_RS03100at 656.332 kb on - strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.333 kb on + strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.334 kb on - strand, within A4249_RS03100at 656.438 kb on + strand, within A4249_RS03100at 656.528 kb on + strand, within A4249_RS03100at 656.529 kb on - strand, within A4249_RS03100at 656.678 kb on + strand, within A4249_RS03100at 656.678 kb on + strand, within A4249_RS03100at 656.678 kb on + strand, within A4249_RS03100at 656.679 kb on - strand, within A4249_RS03100

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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653,369 + A4249_RS03090 0.58 +0.8
653,370 - A4249_RS03090 0.58 -0.7
653,370 - A4249_RS03090 0.58 -0.1
653,540 + A4249_RS03090 0.67 +0.2
653,540 + A4249_RS03090 0.67 -3.4
653,540 + A4249_RS03090 0.67 -1.0
653,540 + A4249_RS03090 0.67 -1.0
653,540 + A4249_RS03090 0.67 -0.5
653,540 + A4249_RS03090 0.67 +0.4
653,540 + A4249_RS03090 0.67 -0.4
653,540 + A4249_RS03090 0.67 -1.5
653,540 + A4249_RS03090 0.67 -1.4
653,541 - A4249_RS03090 0.67 -2.5
653,541 - A4249_RS03090 0.67 -0.1
653,541 - A4249_RS03090 0.67 -0.1
653,541 - A4249_RS03090 0.67 -0.6
653,541 - A4249_RS03090 0.67 -0.8
653,541 - A4249_RS03090 0.67 -1.9
653,541 - A4249_RS03090 0.67 -0.9
653,541 - A4249_RS03090 0.67 -0.3
653,627 + A4249_RS03090 0.72 -0.1
653,627 + A4249_RS03090 0.72 -0.7
653,628 - A4249_RS03090 0.72 -0.8
653,628 - A4249_RS03090 0.72 +0.9
653,759 + A4249_RS03090 0.78 +0.0
653,759 + A4249_RS03090 0.78 -0.7
653,759 + A4249_RS03090 0.78 -0.5
653,759 + A4249_RS03090 0.78 -0.2
653,759 + A4249_RS03090 0.78 -0.8
653,760 - A4249_RS03090 0.79 -0.6
653,760 - A4249_RS03090 0.79 +1.0
653,760 - A4249_RS03090 0.79 -0.3
653,760 - A4249_RS03090 0.79 -0.7
653,760 - A4249_RS03090 0.79 +0.9
653,760 - A4249_RS03090 0.79 +0.4
653,760 - A4249_RS03090 0.79 -0.1
653,816 + A4249_RS03090 0.81 -0.6
653,999 + +0.3
654,000 - -0.7
654,059 + +0.8
654,059 + -0.4
654,059 + -0.5
654,059 + -0.2
654,060 - -0.7
654,060 - -0.9
654,060 - -0.0
654,233 + -0.3
654,257 - -1.3
654,274 + -1.2
654,275 - +0.1
654,348 - -0.3
654,626 + A4249_RS03095 0.20 -0.3
654,692 + A4249_RS03095 0.25 +1.0
654,692 + A4249_RS03095 0.25 -0.9
654,692 + A4249_RS03095 0.25 +1.2
654,692 + A4249_RS03095 0.25 -0.5
654,693 - A4249_RS03095 0.25 -0.7
654,693 - A4249_RS03095 0.25 +0.2
654,716 + A4249_RS03095 0.26 -0.1
654,821 + A4249_RS03095 0.34 -0.3
654,821 + A4249_RS03095 0.34 -0.6
654,821 + A4249_RS03095 0.34 +0.1
654,821 + A4249_RS03095 0.34 -1.3
654,821 + A4249_RS03095 0.34 +0.2
654,822 - A4249_RS03095 0.34 +1.4
654,822 - A4249_RS03095 0.34 -0.2
654,822 - A4249_RS03095 0.34 -0.8
654,822 - A4249_RS03095 0.34 -0.7
654,822 - A4249_RS03095 0.34 +0.0
654,864 + A4249_RS03095 0.37 +0.8
654,864 + A4249_RS03095 0.37 -1.5
654,864 + A4249_RS03095 0.37 +0.8
654,864 + A4249_RS03095 0.37 +0.1
654,864 + A4249_RS03095 0.37 +0.7
654,864 + A4249_RS03095 0.37 +0.9
654,865 - A4249_RS03095 0.37 -1.5
654,865 - A4249_RS03095 0.37 -0.3
654,865 - A4249_RS03095 0.37 -0.4
654,865 - A4249_RS03095 0.37 -0.8
654,865 - A4249_RS03095 0.37 +0.0
654,865 - A4249_RS03095 0.37 -0.4
654,865 - A4249_RS03095 0.37 -1.0
654,865 - A4249_RS03095 0.37 -0.2
654,866 + A4249_RS03095 0.37 +0.4
654,866 + A4249_RS03095 0.37 +0.9
654,866 + A4249_RS03095 0.37 +0.2
654,866 + A4249_RS03095 0.37 -1.6
654,866 + A4249_RS03095 0.37 -0.2
654,867 - A4249_RS03095 0.37 -0.1
654,867 - A4249_RS03095 0.37 -0.1
654,867 - A4249_RS03095 0.37 +0.8
654,867 - A4249_RS03095 0.37 +0.2
654,867 - A4249_RS03095 0.37 +1.6
655,199 + A4249_RS03095 0.61 +0.1
655,199 + A4249_RS03095 0.61 +0.4
655,199 + A4249_RS03095 0.61 -0.7
655,200 - A4249_RS03095 0.61 -0.6
655,200 - A4249_RS03095 0.61 -0.9
655,449 - A4249_RS03095 0.79 +0.2
655,723 + +0.4
655,724 - +0.1
655,724 - -1.1
655,736 + +0.9
655,736 + +0.8
655,736 + +0.4
655,736 + -0.0
655,736 + -0.9
655,736 + +0.2
655,736 + +0.2
655,736 + +1.1
655,736 + -0.8
655,736 + +0.3
655,737 - +0.3
655,737 - -0.1
655,737 - -0.3
655,737 - -0.2
655,737 - -1.2
655,737 - -0.8
655,737 - -0.1
655,737 - +0.2
655,737 - +0.9
655,773 + +0.1
655,773 + +0.9
655,773 + +0.1
655,774 - -0.1
655,774 - -1.0
655,774 - -0.3
655,774 - -0.1
655,774 - -0.2
655,932 - +0.4
656,129 + A4249_RS03100 0.25 +0.7
656,129 + A4249_RS03100 0.25 +0.9
656,129 + A4249_RS03100 0.25 -0.2
656,130 - A4249_RS03100 0.25 -0.0
656,130 - A4249_RS03100 0.25 +1.2
656,130 - A4249_RS03100 0.25 +0.4
656,225 + A4249_RS03100 0.32 +1.6
656,225 + A4249_RS03100 0.32 +0.3
656,226 - A4249_RS03100 0.32 -0.2
656,331 + A4249_RS03100 0.41 -1.0
656,331 + A4249_RS03100 0.41 -0.1
656,331 + A4249_RS03100 0.41 +0.2
656,332 - A4249_RS03100 0.41 +0.4
656,332 - A4249_RS03100 0.41 -0.3
656,332 - A4249_RS03100 0.41 +0.0
656,333 + A4249_RS03100 0.41 +1.2
656,333 + A4249_RS03100 0.41 +0.5
656,333 + A4249_RS03100 0.41 +0.7
656,333 + A4249_RS03100 0.41 -1.5
656,333 + A4249_RS03100 0.41 -0.0
656,333 + A4249_RS03100 0.41 +0.2
656,333 + A4249_RS03100 0.41 -1.0
656,333 + A4249_RS03100 0.41 -0.4
656,333 + A4249_RS03100 0.41 -0.4
656,333 + A4249_RS03100 0.41 +0.1
656,333 + A4249_RS03100 0.41 +0.7
656,334 - A4249_RS03100 0.41 +0.1
656,334 - A4249_RS03100 0.41 -1.2
656,334 - A4249_RS03100 0.41 -2.1
656,334 - A4249_RS03100 0.41 +0.1
656,334 - A4249_RS03100 0.41 +1.2
656,334 - A4249_RS03100 0.41 +0.8
656,334 - A4249_RS03100 0.41 -0.2
656,334 - A4249_RS03100 0.41 -0.1
656,334 - A4249_RS03100 0.41 +0.1
656,438 + A4249_RS03100 0.49 +0.2
656,528 + A4249_RS03100 0.56 -0.5
656,529 - A4249_RS03100 0.56 -0.4
656,678 + A4249_RS03100 0.68 -0.5
656,678 + A4249_RS03100 0.68 +1.4
656,678 + A4249_RS03100 0.68 -1.4
656,679 - A4249_RS03100 0.68 -0.1

Or see this region's nucleotide sequence