Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02390 and A4249_RS02395 overlap by 14 nucleotides A4249_RS02395 and A4249_RS02400 are separated by 109 nucleotides A4249_RS02400 and A4249_RS02405 are separated by 134 nucleotides
A4249_RS02390: A4249_RS02390 - TonB-dependent receptor, at 509,859 to 512,333
_RS02390
A4249_RS02395: A4249_RS02395 - FecR domain-containing protein, at 512,320 to 513,270
_RS02395
A4249_RS02400: A4249_RS02400 - RNA polymerase sigma factor, at 513,380 to 513,970
_RS02400
A4249_RS02405: A4249_RS02405 - hypothetical protein, at 514,105 to 515,070
_RS02405
Position (kb) 512
513
514 Strain fitness (log2 ratio) -2
-1
0
1
2 at 511.352 kb on + strand, within A4249_RS02390 at 511.352 kb on + strand, within A4249_RS02390 at 511.352 kb on + strand, within A4249_RS02390 at 511.352 kb on + strand, within A4249_RS02390 at 511.352 kb on + strand, within A4249_RS02390 at 511.352 kb on + strand, within A4249_RS02390 at 511.353 kb on - strand, within A4249_RS02390 at 511.353 kb on - strand, within A4249_RS02390 at 511.353 kb on - strand, within A4249_RS02390 at 511.353 kb on - strand, within A4249_RS02390 at 511.353 kb on - strand, within A4249_RS02390 at 511.353 kb on - strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.354 kb on + strand, within A4249_RS02390 at 511.363 kb on + strand, within A4249_RS02390 at 511.363 kb on + strand, within A4249_RS02390 at 511.363 kb on + strand, within A4249_RS02390 at 511.363 kb on + strand, within A4249_RS02390 at 511.364 kb on - strand, within A4249_RS02390 at 511.364 kb on - strand, within A4249_RS02390 at 511.364 kb on - strand, within A4249_RS02390 at 511.364 kb on - strand, within A4249_RS02390 at 511.364 kb on - strand, within A4249_RS02390 at 511.375 kb on + strand, within A4249_RS02390 at 511.376 kb on - strand, within A4249_RS02390 at 511.526 kb on + strand, within A4249_RS02390 at 511.527 kb on - strand, within A4249_RS02390 at 511.558 kb on + strand, within A4249_RS02390 at 511.558 kb on + strand, within A4249_RS02390 at 511.559 kb on - strand, within A4249_RS02390 at 511.565 kb on + strand, within A4249_RS02390 at 511.565 kb on + strand, within A4249_RS02390 at 511.565 kb on + strand, within A4249_RS02390 at 511.566 kb on - strand, within A4249_RS02390 at 511.566 kb on - strand, within A4249_RS02390 at 511.566 kb on - strand, within A4249_RS02390 at 511.566 kb on - strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.636 kb on + strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.637 kb on - strand, within A4249_RS02390 at 511.661 kb on - strand, within A4249_RS02390 at 511.661 kb on - strand, within A4249_RS02390 at 511.707 kb on + strand, within A4249_RS02390 at 511.708 kb on - strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.980 kb on + strand, within A4249_RS02390 at 511.981 kb on - strand, within A4249_RS02390 at 511.981 kb on - strand, within A4249_RS02390 at 512.024 kb on - strand, within A4249_RS02390 at 512.054 kb on + strand, within A4249_RS02390 at 512.054 kb on + strand, within A4249_RS02390 at 512.055 kb on - strand, within A4249_RS02390 at 512.055 kb on - strand, within A4249_RS02390 at 512.172 kb on + strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.191 kb on + strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.192 kb on - strand at 512.467 kb on + strand, within A4249_RS02395 at 512.489 kb on + strand, within A4249_RS02395 at 512.489 kb on + strand, within A4249_RS02395 at 512.490 kb on - strand, within A4249_RS02395 at 512.885 kb on + strand, within A4249_RS02395 at 512.885 kb on + strand, within A4249_RS02395 at 512.885 kb on + strand, within A4249_RS02395 at 512.886 kb on - strand, within A4249_RS02395 at 512.940 kb on - strand, within A4249_RS02395 at 512.940 kb on - strand, within A4249_RS02395 at 513.138 kb on - strand, within A4249_RS02395 at 513.138 kb on - strand, within A4249_RS02395 at 513.313 kb on + strand at 513.313 kb on + strand at 513.313 kb on + strand at 513.314 kb on - strand at 513.348 kb on + strand at 513.349 kb on - strand at 513.477 kb on + strand, within A4249_RS02400 at 513.477 kb on + strand, within A4249_RS02400 at 513.477 kb on + strand, within A4249_RS02400 at 513.478 kb on - strand, within A4249_RS02400 at 513.478 kb on - strand, within A4249_RS02400 at 513.478 kb on - strand, within A4249_RS02400 at 513.722 kb on + strand, within A4249_RS02400 at 513.722 kb on + strand, within A4249_RS02400 at 513.722 kb on + strand, within A4249_RS02400 at 513.723 kb on - strand, within A4249_RS02400 at 513.723 kb on - strand, within A4249_RS02400 at 513.723 kb on - strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.780 kb on + strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.781 kb on - strand, within A4249_RS02400 at 513.871 kb on - strand, within A4249_RS02400 at 513.871 kb on - strand, within A4249_RS02400 at 513.871 kb on - strand, within A4249_RS02400 at 514.057 kb on + strand at 514.057 kb on + strand at 514.057 kb on + strand at 514.057 kb on + strand at 514.057 kb on + strand at 514.057 kb on + strand at 514.058 kb on - strand at 514.058 kb on - strand at 514.058 kb on - strand at 514.058 kb on - strand at 514.058 kb on - strand at 514.059 kb on + strand at 514.059 kb on + strand at 514.059 kb on + strand at 514.059 kb on + strand at 514.059 kb on + strand at 514.059 kb on + strand at 514.060 kb on - strand at 514.060 kb on - strand at 514.060 kb on - strand at 514.060 kb on - strand at 514.060 kb on - strand at 514.060 kb on - strand at 514.099 kb on + strand at 514.100 kb on + strand at 514.100 kb on + strand at 514.100 kb on + strand at 514.100 kb on + strand at 514.101 kb on - strand at 514.101 kb on - strand at 514.101 kb on - strand at 514.101 kb on - strand at 514.101 kb on - strand at 514.101 kb on - strand at 514.145 kb on + strand at 514.145 kb on + strand at 514.145 kb on + strand at 514.146 kb on - strand at 514.216 kb on + strand, within A4249_RS02405 at 514.216 kb on + strand, within A4249_RS02405 at 514.216 kb on + strand, within A4249_RS02405 at 514.216 kb on + strand, within A4249_RS02405 at 514.216 kb on + strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405 at 514.217 kb on - strand, within A4249_RS02405
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 511,352 + A4249_RS02390 0.60 +1.0 511,352 + A4249_RS02390 0.60 +0.2 511,352 + A4249_RS02390 0.60 -0.3 511,352 + A4249_RS02390 0.60 -0.8 511,352 + A4249_RS02390 0.60 -0.3 511,352 + A4249_RS02390 0.60 -0.8 511,353 - A4249_RS02390 0.60 -0.6 511,353 - A4249_RS02390 0.60 +0.2 511,353 - A4249_RS02390 0.60 -0.4 511,353 - A4249_RS02390 0.60 +0.6 511,353 - A4249_RS02390 0.60 -1.0 511,353 - A4249_RS02390 0.60 -0.8 511,354 + A4249_RS02390 0.60 +0.5 511,354 + A4249_RS02390 0.60 +0.2 511,354 + A4249_RS02390 0.60 -1.2 511,354 + A4249_RS02390 0.60 -0.4 511,354 + A4249_RS02390 0.60 -0.6 511,354 + A4249_RS02390 0.60 +0.5 511,354 + A4249_RS02390 0.60 -1.0 511,363 + A4249_RS02390 0.61 +0.2 511,363 + A4249_RS02390 0.61 -1.1 511,363 + A4249_RS02390 0.61 -0.2 511,363 + A4249_RS02390 0.61 -0.5 511,364 - A4249_RS02390 0.61 -0.2 511,364 - A4249_RS02390 0.61 -0.1 511,364 - A4249_RS02390 0.61 +0.3 511,364 - A4249_RS02390 0.61 +0.7 511,364 - A4249_RS02390 0.61 -0.0 511,375 + A4249_RS02390 0.61 +0.0 511,376 - A4249_RS02390 0.61 +0.8 511,526 + A4249_RS02390 0.67 +0.3 511,527 - A4249_RS02390 0.67 -0.9 511,558 + A4249_RS02390 0.69 -0.5 511,558 + A4249_RS02390 0.69 -0.2 511,559 - A4249_RS02390 0.69 +0.6 511,565 + A4249_RS02390 0.69 -2.5 511,565 + A4249_RS02390 0.69 -2.5 511,565 + A4249_RS02390 0.69 -2.0 511,566 - A4249_RS02390 0.69 -1.6 511,566 - A4249_RS02390 0.69 -1.1 511,566 - A4249_RS02390 0.69 -0.4 511,566 - A4249_RS02390 0.69 +0.0 511,636 + A4249_RS02390 0.72 -0.2 511,636 + A4249_RS02390 0.72 +0.2 511,636 + A4249_RS02390 0.72 -0.6 511,636 + A4249_RS02390 0.72 -1.0 511,636 + A4249_RS02390 0.72 -1.3 511,636 + A4249_RS02390 0.72 +0.4 511,636 + A4249_RS02390 0.72 -0.9 511,636 + A4249_RS02390 0.72 -1.3 511,637 - A4249_RS02390 0.72 -1.6 511,637 - A4249_RS02390 0.72 -1.2 511,637 - A4249_RS02390 0.72 -0.1 511,637 - A4249_RS02390 0.72 -0.2 511,637 - A4249_RS02390 0.72 -0.2 511,637 - A4249_RS02390 0.72 -1.7 511,637 - A4249_RS02390 0.72 -1.0 511,637 - A4249_RS02390 0.72 +0.8 511,637 - A4249_RS02390 0.72 -1.6 511,637 - A4249_RS02390 0.72 +0.7 511,637 - A4249_RS02390 0.72 +0.3 511,637 - A4249_RS02390 0.72 -0.2 511,661 - A4249_RS02390 0.73 -1.0 511,661 - A4249_RS02390 0.73 -2.4 511,707 + A4249_RS02390 0.75 +1.2 511,708 - A4249_RS02390 0.75 -0.7 511,980 + A4249_RS02390 0.86 +0.1 511,980 + A4249_RS02390 0.86 +0.1 511,980 + A4249_RS02390 0.86 +0.3 511,980 + A4249_RS02390 0.86 -0.5 511,980 + A4249_RS02390 0.86 -0.4 511,980 + A4249_RS02390 0.86 +1.9 511,980 + A4249_RS02390 0.86 +0.2 511,981 - A4249_RS02390 0.86 +0.4 511,981 - A4249_RS02390 0.86 +0.1 512,024 - A4249_RS02390 0.87 -0.3 512,054 + A4249_RS02390 0.89 -0.3 512,054 + A4249_RS02390 0.89 +0.3 512,055 - A4249_RS02390 0.89 -0.8 512,055 - A4249_RS02390 0.89 +0.7 512,172 + +1.0 512,191 + -0.3 512,191 + +0.4 512,191 + +0.2 512,191 + -0.2 512,191 + -0.0 512,191 + -0.5 512,191 + -1.0 512,192 - -0.8 512,192 - +0.3 512,192 - -1.3 512,192 - +1.0 512,192 - -1.1 512,192 - +0.5 512,192 - +0.5 512,192 - -0.1 512,192 - +1.0 512,192 - -0.2 512,192 - -0.3 512,192 - -0.5 512,192 - +1.2 512,192 - +0.0 512,467 + A4249_RS02395 0.15 +0.0 512,489 + A4249_RS02395 0.18 -0.3 512,489 + A4249_RS02395 0.18 -0.7 512,490 - A4249_RS02395 0.18 +0.8 512,885 + A4249_RS02395 0.59 +0.2 512,885 + A4249_RS02395 0.59 +0.2 512,885 + A4249_RS02395 0.59 -1.8 512,886 - A4249_RS02395 0.60 +1.6 512,940 - A4249_RS02395 0.65 +1.2 512,940 - A4249_RS02395 0.65 +0.5 513,138 - A4249_RS02395 0.86 +0.5 513,138 - A4249_RS02395 0.86 +1.9 513,313 + -0.7 513,313 + +0.8 513,313 + -0.2 513,314 - -1.2 513,348 + -0.4 513,349 - +0.0 513,477 + A4249_RS02400 0.16 +0.2 513,477 + A4249_RS02400 0.16 -1.9 513,477 + A4249_RS02400 0.16 +0.0 513,478 - A4249_RS02400 0.17 -0.2 513,478 - A4249_RS02400 0.17 -0.2 513,478 - A4249_RS02400 0.17 -0.4 513,722 + A4249_RS02400 0.58 -2.0 513,722 + A4249_RS02400 0.58 -0.0 513,722 + A4249_RS02400 0.58 +0.1 513,723 - A4249_RS02400 0.58 +0.3 513,723 - A4249_RS02400 0.58 -0.4 513,723 - A4249_RS02400 0.58 +0.2 513,780 + A4249_RS02400 0.68 +1.0 513,780 + A4249_RS02400 0.68 +0.4 513,780 + A4249_RS02400 0.68 +0.8 513,780 + A4249_RS02400 0.68 +0.9 513,780 + A4249_RS02400 0.68 +0.8 513,780 + A4249_RS02400 0.68 +0.5 513,780 + A4249_RS02400 0.68 +0.0 513,780 + A4249_RS02400 0.68 -0.5 513,780 + A4249_RS02400 0.68 -0.4 513,780 + A4249_RS02400 0.68 +0.3 513,780 + A4249_RS02400 0.68 +0.0 513,780 + A4249_RS02400 0.68 +0.5 513,780 + A4249_RS02400 0.68 -0.7 513,780 + A4249_RS02400 0.68 -0.3 513,780 + A4249_RS02400 0.68 -0.9 513,780 + A4249_RS02400 0.68 +1.3 513,780 + A4249_RS02400 0.68 +0.3 513,780 + A4249_RS02400 0.68 +1.2 513,781 - A4249_RS02400 0.68 -1.0 513,781 - A4249_RS02400 0.68 -0.1 513,781 - A4249_RS02400 0.68 +0.2 513,781 - A4249_RS02400 0.68 +1.0 513,781 - A4249_RS02400 0.68 -1.0 513,781 - A4249_RS02400 0.68 +0.1 513,781 - A4249_RS02400 0.68 +0.4 513,781 - A4249_RS02400 0.68 -0.2 513,781 - A4249_RS02400 0.68 -0.3 513,781 - A4249_RS02400 0.68 -0.2 513,781 - A4249_RS02400 0.68 +0.7 513,781 - A4249_RS02400 0.68 +0.9 513,781 - A4249_RS02400 0.68 -0.4 513,781 - A4249_RS02400 0.68 +1.3 513,871 - A4249_RS02400 0.83 -1.4 513,871 - A4249_RS02400 0.83 +0.9 513,871 - A4249_RS02400 0.83 +0.2 514,057 + -0.5 514,057 + +1.0 514,057 + +1.0 514,057 + -0.1 514,057 + -0.4 514,057 + -0.1 514,058 - -0.4 514,058 - +0.4 514,058 - +0.7 514,058 - -0.5 514,058 - -0.3 514,059 + +0.4 514,059 + -0.8 514,059 + -0.3 514,059 + -2.0 514,059 + -0.1 514,059 + -0.3 514,060 - -0.7 514,060 - -0.1 514,060 - -0.9 514,060 - +0.6 514,060 - +0.1 514,060 - -1.0 514,099 + -0.5 514,100 + -1.5 514,100 + +1.7 514,100 + -0.1 514,100 + -0.7 514,101 - -0.5 514,101 - -1.3 514,101 - -0.5 514,101 - -1.8 514,101 - +0.0 514,101 - -0.5 514,145 + -0.8 514,145 + +0.5 514,145 + +0.2 514,146 - +0.3 514,216 + A4249_RS02405 0.11 -0.5 514,216 + A4249_RS02405 0.11 +0.8 514,216 + A4249_RS02405 0.11 -0.7 514,216 + A4249_RS02405 0.11 +1.3 514,216 + A4249_RS02405 0.11 -0.8 514,217 - A4249_RS02405 0.12 +0.1 514,217 - A4249_RS02405 0.12 -0.4 514,217 - A4249_RS02405 0.12 +0.3 514,217 - A4249_RS02405 0.12 +1.0 514,217 - A4249_RS02405 0.12 -0.0 514,217 - A4249_RS02405 0.12 +0.3 514,217 - A4249_RS02405 0.12 +0.1 514,217 - A4249_RS02405 0.12 +0.2 514,217 - A4249_RS02405 0.12 -1.1 514,217 - A4249_RS02405 0.12 +0.3
Or see this region's nucleotide sequence