Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02250 and A4249_RS02255 overlap by 4 nucleotides A4249_RS02255 and A4249_RS02260 are separated by 40 nucleotides A4249_RS02260 and A4249_RS02270 are separated by 751 nucleotides
A4249_RS02250: A4249_RS02250 - M23 family metallopeptidase, at 473,260 to 474,117
_RS02250
A4249_RS02255: A4249_RS02255 - DUF2093 domain-containing protein, at 474,114 to 474,314
_RS02255
A4249_RS02260: A4249_RS02260 - cation:proton antiporter, at 474,355 to 475,608
_RS02260
A4249_RS02270: A4249_RS02270 - isoleucine--tRNA ligase, at 476,360 to 479,350
_RS02270
Position (kb) 474
475
476 Strain fitness (log2 ratio) -2
-1
0
1 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.444 kb on + strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.445 kb on - strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.582 kb on + strand, within A4249_RS02250 at 473.583 kb on - strand, within A4249_RS02250 at 473.583 kb on - strand, within A4249_RS02250 at 473.583 kb on - strand, within A4249_RS02250 at 473.608 kb on + strand, within A4249_RS02250 at 473.608 kb on + strand, within A4249_RS02250 at 473.645 kb on + strand, within A4249_RS02250 at 473.646 kb on - strand, within A4249_RS02250 at 474.160 kb on + strand, within A4249_RS02255 at 474.160 kb on + strand, within A4249_RS02255 at 474.160 kb on + strand, within A4249_RS02255 at 474.161 kb on - strand, within A4249_RS02255 at 474.278 kb on - strand, within A4249_RS02255 at 474.326 kb on - strand at 474.881 kb on + strand, within A4249_RS02260 at 474.881 kb on + strand, within A4249_RS02260 at 474.882 kb on - strand, within A4249_RS02260 at 474.882 kb on - strand, within A4249_RS02260 at 475.470 kb on + strand, within A4249_RS02260 at 475.470 kb on + strand, within A4249_RS02260 at 475.471 kb on - strand, within A4249_RS02260 at 475.471 kb on - strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.473 kb on - strand, within A4249_RS02260 at 475.502 kb on + strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.629 kb on + strand at 475.789 kb on + strand at 475.789 kb on + strand at 475.789 kb on + strand at 475.790 kb on - strand at 475.797 kb on - strand at 475.797 kb on - strand at 475.888 kb on + strand at 475.888 kb on + strand at 475.888 kb on + strand at 475.944 kb on - strand at 475.944 kb on - strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.106 kb on + strand at 476.107 kb on - strand at 476.107 kb on - strand at 476.146 kb on + strand at 476.146 kb on + strand at 476.147 kb on - strand at 476.147 kb on - strand at 476.147 kb on - strand at 476.147 kb on - strand at 476.297 kb on + strand at 476.298 kb on - strand at 476.298 kb on - strand at 476.298 kb on - strand at 476.298 kb on - strand at 476.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 473,444 + A4249_RS02250 0.21 +0.4 473,444 + A4249_RS02250 0.21 +0.2 473,444 + A4249_RS02250 0.21 -1.0 473,444 + A4249_RS02250 0.21 -2.3 473,444 + A4249_RS02250 0.21 -0.3 473,445 - A4249_RS02250 0.22 -0.1 473,445 - A4249_RS02250 0.22 -1.6 473,445 - A4249_RS02250 0.22 -0.3 473,445 - A4249_RS02250 0.22 -0.2 473,445 - A4249_RS02250 0.22 -0.5 473,582 + A4249_RS02250 0.38 -0.2 473,582 + A4249_RS02250 0.38 +0.6 473,582 + A4249_RS02250 0.38 -1.0 473,582 + A4249_RS02250 0.38 -1.3 473,582 + A4249_RS02250 0.38 -0.8 473,583 - A4249_RS02250 0.38 +0.1 473,583 - A4249_RS02250 0.38 +0.3 473,583 - A4249_RS02250 0.38 -0.5 473,608 + A4249_RS02250 0.41 +0.1 473,608 + A4249_RS02250 0.41 +0.0 473,645 + A4249_RS02250 0.45 +1.0 473,646 - A4249_RS02250 0.45 -0.5 474,160 + A4249_RS02255 0.23 -0.6 474,160 + A4249_RS02255 0.23 -0.3 474,160 + A4249_RS02255 0.23 +0.8 474,161 - A4249_RS02255 0.23 +0.2 474,278 - A4249_RS02255 0.82 +0.1 474,326 - -0.2 474,881 + A4249_RS02260 0.42 -0.5 474,881 + A4249_RS02260 0.42 +0.5 474,882 - A4249_RS02260 0.42 -0.8 474,882 - A4249_RS02260 0.42 -2.2 475,470 + A4249_RS02260 0.89 -0.6 475,470 + A4249_RS02260 0.89 -0.8 475,471 - A4249_RS02260 0.89 -1.6 475,471 - A4249_RS02260 0.89 +0.1 475,472 + A4249_RS02260 0.89 -0.3 475,472 + A4249_RS02260 0.89 -1.5 475,472 + A4249_RS02260 0.89 +0.3 475,472 + A4249_RS02260 0.89 -0.9 475,473 - A4249_RS02260 0.89 +0.7 475,502 + -0.5 475,503 - +0.1 475,503 - -1.4 475,503 - -0.1 475,503 - +0.7 475,503 - -0.5 475,503 - -0.6 475,503 - -1.2 475,629 + -0.8 475,789 + -1.8 475,789 + +0.8 475,789 + +0.2 475,790 - +0.5 475,797 - -0.9 475,797 - +1.5 475,888 + -1.0 475,888 + -2.2 475,888 + +0.2 475,944 - -2.5 475,944 - -0.9 476,103 + +0.7 476,103 + -0.1 476,103 + -1.4 476,103 + +0.3 476,103 + +0.5 476,103 + -0.2 476,103 + -0.8 476,103 + -0.8 476,104 - -0.1 476,104 - -0.5 476,104 - -0.6 476,104 - -0.3 476,104 - -1.2 476,104 - -1.7 476,104 - -1.1 476,104 - -0.4 476,104 - -0.3 476,104 - -0.3 476,104 - +0.2 476,104 - -1.9 476,106 + -0.0 476,107 - -0.9 476,107 - -1.0 476,146 + +0.2 476,146 + +1.2 476,147 - +0.4 476,147 - +0.2 476,147 - +0.1 476,147 - +0.1 476,297 + -0.5 476,298 - -0.5 476,298 - +0.9 476,298 - +0.1 476,298 - +0.5 476,298 - -0.0
Or see this region's nucleotide sequence