Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02220 and A4249_RS02225 are separated by 39 nucleotides A4249_RS02225 and A4249_RS02230 are separated by 39 nucleotides A4249_RS02230 and A4249_RS02235 are separated by 109 nucleotides A4249_RS02235 and A4249_RS02240 overlap by 11 nucleotides
A4249_RS02220: A4249_RS02220 - MaoC family dehydratase, at 468,195 to 468,656
_RS02220
A4249_RS02225: A4249_RS02225 - TIGR01459 family HAD-type hydrolase, at 468,696 to 469,565
_RS02225
A4249_RS02230: A4249_RS02230 - EAL domain-containing protein, at 469,605 to 470,879
_RS02230
A4249_RS02235: A4249_RS02235 - SDR family oxidoreductase, at 470,989 to 471,771
_RS02235
A4249_RS02240: A4249_RS02240 - lipid A biosynthesis acyltransferase, at 471,761 to 472,729
_RS02240
Position (kb) 469
470
471 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 468.620 kb on - strand at 468.620 kb on - strand at 468.620 kb on - strand at 468.698 kb on - strand at 468.698 kb on - strand at 468.698 kb on - strand at 468.731 kb on - strand at 469.009 kb on + strand, within A4249_RS02225 at 469.130 kb on - strand, within A4249_RS02225 at 469.516 kb on + strand at 469.606 kb on + strand at 469.606 kb on + strand at 469.607 kb on - strand at 469.607 kb on - strand at 469.919 kb on + strand, within A4249_RS02230 at 469.919 kb on + strand, within A4249_RS02230 at 469.920 kb on - strand, within A4249_RS02230 at 469.979 kb on + strand, within A4249_RS02230 at 469.980 kb on - strand, within A4249_RS02230 at 469.980 kb on - strand, within A4249_RS02230 at 470.287 kb on + strand, within A4249_RS02230 at 470.287 kb on + strand, within A4249_RS02230 at 470.287 kb on + strand, within A4249_RS02230 at 470.287 kb on + strand, within A4249_RS02230 at 470.287 kb on + strand, within A4249_RS02230 at 470.287 kb on + strand, within A4249_RS02230 at 470.288 kb on - strand, within A4249_RS02230 at 470.288 kb on - strand, within A4249_RS02230 at 470.288 kb on - strand, within A4249_RS02230 at 470.288 kb on - strand, within A4249_RS02230 at 470.288 kb on - strand, within A4249_RS02230 at 470.288 kb on - strand, within A4249_RS02230 at 470.344 kb on + strand, within A4249_RS02230 at 470.344 kb on + strand, within A4249_RS02230 at 470.344 kb on + strand, within A4249_RS02230 at 470.345 kb on - strand, within A4249_RS02230 at 470.345 kb on - strand, within A4249_RS02230 at 470.345 kb on - strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.389 kb on + strand, within A4249_RS02230 at 470.390 kb on - strand, within A4249_RS02230 at 470.390 kb on - strand, within A4249_RS02230 at 470.390 kb on - strand, within A4249_RS02230 at 470.842 kb on + strand at 470.843 kb on - strand at 470.843 kb on - strand at 470.851 kb on + strand at 470.852 kb on - strand at 470.868 kb on + strand at 470.868 kb on + strand at 470.868 kb on + strand at 470.868 kb on + strand at 470.868 kb on + strand at 470.868 kb on + strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.869 kb on - strand at 470.919 kb on + strand at 470.927 kb on + strand at 470.928 kb on - strand at 470.928 kb on - strand at 470.928 kb on - strand at 470.976 kb on + strand at 470.976 kb on + strand at 470.977 kb on - strand at 471.154 kb on + strand, within A4249_RS02235 at 471.155 kb on - strand, within A4249_RS02235 at 471.155 kb on - strand, within A4249_RS02235 at 471.155 kb on - strand, within A4249_RS02235 at 471.172 kb on - strand, within A4249_RS02235 at 471.298 kb on + strand, within A4249_RS02235 at 471.298 kb on + strand, within A4249_RS02235 at 471.299 kb on - strand, within A4249_RS02235 at 471.354 kb on + strand, within A4249_RS02235 at 471.354 kb on + strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.355 kb on - strand, within A4249_RS02235 at 471.478 kb on + strand, within A4249_RS02235 at 471.478 kb on + strand, within A4249_RS02235 at 471.478 kb on + strand, within A4249_RS02235 at 471.478 kb on + strand, within A4249_RS02235 at 471.478 kb on + strand, within A4249_RS02235 at 471.479 kb on - strand, within A4249_RS02235 at 471.479 kb on - strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.483 kb on + strand, within A4249_RS02235 at 471.484 kb on - strand, within A4249_RS02235 at 471.484 kb on - strand, within A4249_RS02235 at 471.484 kb on - strand, within A4249_RS02235 at 471.598 kb on + strand, within A4249_RS02235 at 471.598 kb on + strand, within A4249_RS02235 at 471.599 kb on - strand, within A4249_RS02235 at 471.599 kb on - strand, within A4249_RS02235 at 471.599 kb on - strand, within A4249_RS02235 at 471.599 kb on - strand, within A4249_RS02235 at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.694 kb on + strand at 471.695 kb on - strand at 471.695 kb on - strand at 471.695 kb on - strand at 471.695 kb on - strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.718 kb on + strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand at 471.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 468,620 - +0.3 468,620 - +1.2 468,620 - +0.7 468,698 - -2.0 468,698 - +0.5 468,698 - -0.0 468,731 - +3.0 469,009 + A4249_RS02225 0.36 +1.5 469,130 - A4249_RS02225 0.50 +2.0 469,516 + +3.0 469,606 + -0.7 469,606 + -0.2 469,607 - +0.4 469,607 - +0.3 469,919 + A4249_RS02230 0.25 -0.1 469,919 + A4249_RS02230 0.25 -1.4 469,920 - A4249_RS02230 0.25 +0.5 469,979 + A4249_RS02230 0.29 +0.0 469,980 - A4249_RS02230 0.29 -0.7 469,980 - A4249_RS02230 0.29 -0.6 470,287 + A4249_RS02230 0.53 +0.7 470,287 + A4249_RS02230 0.53 +0.3 470,287 + A4249_RS02230 0.53 +1.8 470,287 + A4249_RS02230 0.53 +0.3 470,287 + A4249_RS02230 0.53 -0.1 470,287 + A4249_RS02230 0.53 +0.6 470,288 - A4249_RS02230 0.54 +0.2 470,288 - A4249_RS02230 0.54 -0.0 470,288 - A4249_RS02230 0.54 +0.8 470,288 - A4249_RS02230 0.54 -0.8 470,288 - A4249_RS02230 0.54 +2.0 470,288 - A4249_RS02230 0.54 +0.5 470,344 + A4249_RS02230 0.58 -0.2 470,344 + A4249_RS02230 0.58 -0.3 470,344 + A4249_RS02230 0.58 +1.6 470,345 - A4249_RS02230 0.58 +0.9 470,345 - A4249_RS02230 0.58 +1.5 470,345 - A4249_RS02230 0.58 -0.7 470,389 + A4249_RS02230 0.61 +0.2 470,389 + A4249_RS02230 0.61 -0.9 470,389 + A4249_RS02230 0.61 -2.0 470,389 + A4249_RS02230 0.61 +0.0 470,389 + A4249_RS02230 0.61 -0.7 470,389 + A4249_RS02230 0.61 -0.3 470,389 + A4249_RS02230 0.61 +1.0 470,390 - A4249_RS02230 0.62 +0.0 470,390 - A4249_RS02230 0.62 +1.1 470,390 - A4249_RS02230 0.62 -1.1 470,842 + +0.2 470,843 - -0.8 470,843 - +1.5 470,851 + -0.3 470,852 - -0.1 470,868 + +0.3 470,868 + +0.2 470,868 + +0.7 470,868 + -1.0 470,868 + -0.3 470,868 + -0.3 470,869 - +0.0 470,869 - -0.9 470,869 - -0.0 470,869 - -0.3 470,869 - -1.2 470,869 - -0.8 470,869 - -0.7 470,869 - +0.8 470,869 - -0.5 470,869 - -0.4 470,869 - +1.2 470,919 + -0.5 470,927 + -1.0 470,928 - -0.8 470,928 - -0.3 470,928 - +0.0 470,976 + +0.5 470,976 + -0.5 470,977 - +1.0 471,154 + A4249_RS02235 0.21 -0.3 471,155 - A4249_RS02235 0.21 -0.6 471,155 - A4249_RS02235 0.21 +0.2 471,155 - A4249_RS02235 0.21 -1.1 471,172 - A4249_RS02235 0.23 +0.1 471,298 + A4249_RS02235 0.39 -0.4 471,298 + A4249_RS02235 0.39 -1.8 471,299 - A4249_RS02235 0.40 -0.2 471,354 + A4249_RS02235 0.47 +0.2 471,354 + A4249_RS02235 0.47 +0.1 471,355 - A4249_RS02235 0.47 -0.1 471,355 - A4249_RS02235 0.47 -0.2 471,355 - A4249_RS02235 0.47 -1.8 471,355 - A4249_RS02235 0.47 -0.7 471,355 - A4249_RS02235 0.47 -0.5 471,355 - A4249_RS02235 0.47 -1.9 471,355 - A4249_RS02235 0.47 -3.3 471,355 - A4249_RS02235 0.47 +0.8 471,478 + A4249_RS02235 0.62 +0.1 471,478 + A4249_RS02235 0.62 +0.5 471,478 + A4249_RS02235 0.62 +0.5 471,478 + A4249_RS02235 0.62 -0.8 471,478 + A4249_RS02235 0.62 -0.1 471,479 - A4249_RS02235 0.63 -0.4 471,479 - A4249_RS02235 0.63 -0.4 471,483 + A4249_RS02235 0.63 +1.7 471,483 + A4249_RS02235 0.63 +0.5 471,483 + A4249_RS02235 0.63 +0.0 471,483 + A4249_RS02235 0.63 -0.2 471,483 + A4249_RS02235 0.63 +0.1 471,483 + A4249_RS02235 0.63 -0.3 471,483 + A4249_RS02235 0.63 -1.3 471,483 + A4249_RS02235 0.63 -0.3 471,484 - A4249_RS02235 0.63 -0.1 471,484 - A4249_RS02235 0.63 +0.2 471,484 - A4249_RS02235 0.63 +0.1 471,598 + A4249_RS02235 0.78 +0.5 471,598 + A4249_RS02235 0.78 +0.0 471,599 - A4249_RS02235 0.78 -0.1 471,599 - A4249_RS02235 0.78 +0.5 471,599 - A4249_RS02235 0.78 +0.3 471,599 - A4249_RS02235 0.78 -0.7 471,694 + -0.2 471,694 + +0.0 471,694 + -1.7 471,694 + -1.0 471,694 + -0.2 471,694 + -0.2 471,694 + -1.8 471,694 + +0.8 471,694 + -0.6 471,695 - -0.4 471,695 - -0.1 471,695 - -0.3 471,695 - +0.2 471,718 + -0.8 471,718 + -0.6 471,718 + -0.1 471,718 + -0.6 471,718 + +0.5 471,719 - -0.3 471,719 - -0.4 471,719 - -0.5 471,719 - -0.4 471,719 - -0.1 471,719 - -0.3 471,719 - -0.1
Or see this region's nucleotide sequence