Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01060

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01055 and A4249_RS01060 are separated by 65 nucleotidesA4249_RS01060 and A4249_RS01065 are separated by 86 nucleotides A4249_RS01055: A4249_RS01055 - N-acetylglutaminylglutamine amidotransferase, at 202,840 to 204,615 _RS01055 A4249_RS01060: A4249_RS01060 - MarR family transcriptional regulator, at 204,681 to 205,193 _RS01060 A4249_RS01065: A4249_RS01065 - SLC13 family permease, at 205,280 to 207,055 _RS01065 Position (kb) 204 205 206Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 203.693 kb on + strand, within A4249_RS01055at 203.722 kb on - strand, within A4249_RS01055at 203.938 kb on - strand, within A4249_RS01055at 203.938 kb on - strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.068 kb on + strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.069 kb on - strand, within A4249_RS01055at 204.173 kb on + strand, within A4249_RS01055at 204.174 kb on - strand, within A4249_RS01055at 204.374 kb on + strand, within A4249_RS01055at 204.374 kb on + strand, within A4249_RS01055at 204.374 kb on + strand, within A4249_RS01055at 204.374 kb on + strand, within A4249_RS01055at 204.375 kb on - strand, within A4249_RS01055at 204.375 kb on - strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.380 kb on + strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.381 kb on - strand, within A4249_RS01055at 204.501 kb on + strandat 204.501 kb on + strandat 204.502 kb on - strandat 204.502 kb on - strandat 204.502 kb on - strandat 204.502 kb on - strandat 204.502 kb on - strandat 204.502 kb on - strandat 204.502 kb on - strandat 204.603 kb on + strandat 204.603 kb on + strandat 204.647 kb on - strandat 204.689 kb on + strandat 204.689 kb on + strandat 204.689 kb on + strandat 204.689 kb on + strandat 204.690 kb on - strandat 204.779 kb on + strand, within A4249_RS01060at 205.170 kb on + strandat 205.170 kb on + strandat 205.170 kb on + strandat 205.171 kb on - strandat 205.171 kb on - strandat 205.171 kb on - strandat 205.171 kb on - strandat 205.191 kb on + strandat 205.191 kb on + strandat 205.191 kb on + strandat 205.191 kb on + strandat 205.191 kb on + strandat 205.191 kb on + strandat 205.192 kb on - strandat 205.192 kb on - strandat 205.192 kb on - strandat 205.259 kb on + strandat 205.259 kb on + strandat 205.260 kb on - strandat 205.260 kb on - strandat 205.260 kb on - strandat 205.260 kb on - strandat 205.359 kb on + strandat 205.359 kb on + strandat 205.359 kb on + strandat 205.372 kb on + strandat 205.372 kb on + strandat 205.373 kb on - strandat 205.373 kb on - strandat 205.373 kb on - strandat 205.479 kb on + strand, within A4249_RS01065at 205.479 kb on + strand, within A4249_RS01065at 205.480 kb on - strand, within A4249_RS01065at 205.480 kb on - strand, within A4249_RS01065at 205.728 kb on + strand, within A4249_RS01065at 205.728 kb on + strand, within A4249_RS01065at 205.728 kb on + strand, within A4249_RS01065at 205.729 kb on - strand, within A4249_RS01065at 205.729 kb on - strand, within A4249_RS01065at 205.729 kb on - strand, within A4249_RS01065at 205.755 kb on - strand, within A4249_RS01065at 205.755 kb on - strand, within A4249_RS01065at 205.755 kb on - strand, within A4249_RS01065at 205.755 kb on - strand, within A4249_RS01065at 205.755 kb on - strand, within A4249_RS01065at 205.907 kb on + strand, within A4249_RS01065at 205.908 kb on - strand, within A4249_RS01065at 205.908 kb on - strand, within A4249_RS01065at 206.120 kb on + strand, within A4249_RS01065at 206.120 kb on + strand, within A4249_RS01065at 206.120 kb on + strand, within A4249_RS01065at 206.120 kb on + strand, within A4249_RS01065at 206.120 kb on + strand, within A4249_RS01065at 206.120 kb on + strand, within A4249_RS01065at 206.121 kb on - strand, within A4249_RS01065at 206.121 kb on - strand, within A4249_RS01065at 206.121 kb on - strand, within A4249_RS01065at 206.121 kb on - strand, within A4249_RS01065

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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203,693 + A4249_RS01055 0.48 -1.0
203,722 - A4249_RS01055 0.50 -0.4
203,938 - A4249_RS01055 0.62 +0.4
203,938 - A4249_RS01055 0.62 +0.4
204,068 + A4249_RS01055 0.69 -1.2
204,068 + A4249_RS01055 0.69 -0.2
204,068 + A4249_RS01055 0.69 -0.8
204,068 + A4249_RS01055 0.69 -0.2
204,068 + A4249_RS01055 0.69 -2.5
204,068 + A4249_RS01055 0.69 -0.3
204,068 + A4249_RS01055 0.69 +1.0
204,068 + A4249_RS01055 0.69 +0.5
204,068 + A4249_RS01055 0.69 -0.3
204,068 + A4249_RS01055 0.69 -0.2
204,069 - A4249_RS01055 0.69 -1.0
204,069 - A4249_RS01055 0.69 -0.5
204,069 - A4249_RS01055 0.69 -0.2
204,069 - A4249_RS01055 0.69 -0.5
204,069 - A4249_RS01055 0.69 -0.4
204,069 - A4249_RS01055 0.69 +0.9
204,069 - A4249_RS01055 0.69 +1.0
204,069 - A4249_RS01055 0.69 +0.2
204,069 - A4249_RS01055 0.69 -2.5
204,069 - A4249_RS01055 0.69 -1.3
204,069 - A4249_RS01055 0.69 -0.0
204,173 + A4249_RS01055 0.75 -1.9
204,174 - A4249_RS01055 0.75 -1.2
204,374 + A4249_RS01055 0.86 -1.3
204,374 + A4249_RS01055 0.86 +0.2
204,374 + A4249_RS01055 0.86 +0.1
204,374 + A4249_RS01055 0.86 +0.6
204,375 - A4249_RS01055 0.86 +0.3
204,375 - A4249_RS01055 0.86 +0.5
204,380 + A4249_RS01055 0.87 -0.1
204,380 + A4249_RS01055 0.87 +0.5
204,380 + A4249_RS01055 0.87 -0.3
204,380 + A4249_RS01055 0.87 -0.4
204,380 + A4249_RS01055 0.87 -1.3
204,380 + A4249_RS01055 0.87 +0.0
204,380 + A4249_RS01055 0.87 -0.5
204,380 + A4249_RS01055 0.87 +0.7
204,380 + A4249_RS01055 0.87 -0.1
204,380 + A4249_RS01055 0.87 +0.0
204,380 + A4249_RS01055 0.87 -0.6
204,380 + A4249_RS01055 0.87 +0.9
204,380 + A4249_RS01055 0.87 -1.0
204,380 + A4249_RS01055 0.87 +0.0
204,380 + A4249_RS01055 0.87 -0.3
204,381 - A4249_RS01055 0.87 +1.3
204,381 - A4249_RS01055 0.87 -0.7
204,381 - A4249_RS01055 0.87 +0.1
204,381 - A4249_RS01055 0.87 +0.7
204,381 - A4249_RS01055 0.87 -1.8
204,381 - A4249_RS01055 0.87 +0.5
204,381 - A4249_RS01055 0.87 -0.6
204,381 - A4249_RS01055 0.87 +0.3
204,381 - A4249_RS01055 0.87 +0.9
204,381 - A4249_RS01055 0.87 +1.8
204,381 - A4249_RS01055 0.87 -0.8
204,381 - A4249_RS01055 0.87 -0.5
204,501 + +0.8
204,501 + +0.6
204,502 - +2.5
204,502 - +0.5
204,502 - -0.2
204,502 - -0.4
204,502 - +0.5
204,502 - +1.2
204,502 - -0.0
204,603 + -0.2
204,603 + -1.1
204,647 - -0.3
204,689 + -0.4
204,689 + +0.5
204,689 + -1.3
204,689 + +1.3
204,690 - -0.6
204,779 + A4249_RS01060 0.19 +0.2
205,170 + +0.7
205,170 + +0.5
205,170 + -0.2
205,171 - -1.5
205,171 - -0.3
205,171 - -0.1
205,171 - -0.4
205,191 + -0.1
205,191 + -0.3
205,191 + +1.0
205,191 + -1.7
205,191 + -0.1
205,191 + -0.9
205,192 - -0.4
205,192 - +0.7
205,192 - -0.6
205,259 + -0.3
205,259 + -0.6
205,260 - +0.3
205,260 - -0.8
205,260 - +1.0
205,260 - +1.3
205,359 + -1.0
205,359 + +0.0
205,359 + +1.8
205,372 + -2.9
205,372 + -1.6
205,373 - -0.2
205,373 - -0.8
205,373 - +1.0
205,479 + A4249_RS01065 0.11 -0.0
205,479 + A4249_RS01065 0.11 +0.2
205,480 - A4249_RS01065 0.11 -0.2
205,480 - A4249_RS01065 0.11 +0.2
205,728 + A4249_RS01065 0.25 -0.4
205,728 + A4249_RS01065 0.25 +0.1
205,728 + A4249_RS01065 0.25 +0.0
205,729 - A4249_RS01065 0.25 -1.0
205,729 - A4249_RS01065 0.25 +0.6
205,729 - A4249_RS01065 0.25 +0.9
205,755 - A4249_RS01065 0.27 -1.0
205,755 - A4249_RS01065 0.27 -0.0
205,755 - A4249_RS01065 0.27 +0.3
205,755 - A4249_RS01065 0.27 +0.7
205,755 - A4249_RS01065 0.27 -1.6
205,907 + A4249_RS01065 0.35 -1.4
205,908 - A4249_RS01065 0.35 +0.5
205,908 - A4249_RS01065 0.35 +1.3
206,120 + A4249_RS01065 0.47 +0.2
206,120 + A4249_RS01065 0.47 +1.1
206,120 + A4249_RS01065 0.47 +1.0
206,120 + A4249_RS01065 0.47 +0.9
206,120 + A4249_RS01065 0.47 -0.3
206,120 + A4249_RS01065 0.47 -0.4
206,121 - A4249_RS01065 0.47 -0.3
206,121 - A4249_RS01065 0.47 +0.5
206,121 - A4249_RS01065 0.47 +1.5
206,121 - A4249_RS01065 0.47 -0.1

Or see this region's nucleotide sequence