Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00595 and A4249_RS00600 are separated by 48 nucleotides A4249_RS00600 and A4249_RS00605 are separated by 109 nucleotides A4249_RS00605 and A4249_RS00610 are separated by 37 nucleotides
A4249_RS00595: A4249_RS00595 - tetratricopeptide repeat protein, at 105,046 to 105,891
_RS00595
A4249_RS00600: A4249_RS00600 - LamG domain-containing protein, at 105,940 to 106,650
_RS00600
A4249_RS00605: A4249_RS00605 - host attachment protein, at 106,760 to 107,158
_RS00605
A4249_RS00610: A4249_RS00610 - methyl-accepting chemotaxis protein, at 107,196 to 109,403
_RS00610
Position (kb) 106
107
108 Strain fitness (log2 ratio) -2
-1
0
1
2 at 105.769 kb on - strand, within A4249_RS00595 at 105.891 kb on + strand at 105.891 kb on + strand at 105.892 kb on - strand at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.014 kb on - strand, within A4249_RS00600 at 106.014 kb on - strand, within A4249_RS00600 at 106.014 kb on - strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.202 kb on + strand, within A4249_RS00600 at 106.203 kb on - strand, within A4249_RS00600 at 106.458 kb on + strand, within A4249_RS00600 at 106.496 kb on - strand, within A4249_RS00600 at 106.684 kb on + strand at 106.684 kb on + strand at 106.685 kb on - strand at 106.740 kb on + strand at 106.740 kb on + strand at 106.740 kb on + strand at 106.741 kb on - strand at 106.752 kb on + strand at 106.753 kb on - strand at 106.753 kb on - strand at 106.753 kb on - strand at 106.825 kb on + strand, within A4249_RS00605 at 106.825 kb on + strand, within A4249_RS00605 at 106.825 kb on + strand, within A4249_RS00605 at 106.826 kb on - strand, within A4249_RS00605 at 106.826 kb on - strand, within A4249_RS00605 at 107.571 kb on + strand, within A4249_RS00610 at 107.571 kb on + strand, within A4249_RS00610 at 107.572 kb on - strand, within A4249_RS00610 at 107.572 kb on - strand, within A4249_RS00610 at 107.572 kb on - strand, within A4249_RS00610 at 107.572 kb on - strand, within A4249_RS00610 at 107.572 kb on - strand, within A4249_RS00610 at 107.572 kb on - strand, within A4249_RS00610 at 108.013 kb on + strand, within A4249_RS00610 at 108.013 kb on + strand, within A4249_RS00610 at 108.013 kb on + strand, within A4249_RS00610 at 108.013 kb on + strand, within A4249_RS00610 at 108.013 kb on + strand, within A4249_RS00610 at 108.014 kb on - strand, within A4249_RS00610 at 108.014 kb on - strand, within A4249_RS00610 at 108.014 kb on - strand, within A4249_RS00610
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 105,769 - A4249_RS00595 0.85 -1.0 105,891 + +0.9 105,891 + +1.8 105,892 - -0.4 106,013 + A4249_RS00600 0.10 +0.4 106,013 + A4249_RS00600 0.10 -0.6 106,013 + A4249_RS00600 0.10 +0.1 106,013 + A4249_RS00600 0.10 +0.2 106,013 + A4249_RS00600 0.10 +0.4 106,013 + A4249_RS00600 0.10 -0.6 106,014 - A4249_RS00600 0.10 -1.9 106,014 - A4249_RS00600 0.10 -0.5 106,014 - A4249_RS00600 0.10 +0.0 106,109 + A4249_RS00600 0.24 -1.4 106,109 + A4249_RS00600 0.24 -0.2 106,109 + A4249_RS00600 0.24 -1.4 106,109 + A4249_RS00600 0.24 +0.9 106,110 - A4249_RS00600 0.24 -0.4 106,110 - A4249_RS00600 0.24 +0.0 106,110 - A4249_RS00600 0.24 -0.3 106,110 - A4249_RS00600 0.24 -0.7 106,110 - A4249_RS00600 0.24 -0.7 106,202 + A4249_RS00600 0.37 -0.8 106,203 - A4249_RS00600 0.37 -2.2 106,458 + A4249_RS00600 0.73 -0.0 106,496 - A4249_RS00600 0.78 -1.0 106,684 + -1.0 106,684 + -0.6 106,685 - +0.1 106,740 + +1.0 106,740 + -0.3 106,740 + -1.5 106,741 - -0.9 106,752 + +1.0 106,753 - -0.5 106,753 - -0.0 106,753 - -0.0 106,825 + A4249_RS00605 0.16 -0.1 106,825 + A4249_RS00605 0.16 -0.6 106,825 + A4249_RS00605 0.16 +0.4 106,826 - A4249_RS00605 0.17 -0.2 106,826 - A4249_RS00605 0.17 -0.4 107,571 + A4249_RS00610 0.17 +0.9 107,571 + A4249_RS00610 0.17 -0.0 107,572 - A4249_RS00610 0.17 -1.6 107,572 - A4249_RS00610 0.17 +0.1 107,572 - A4249_RS00610 0.17 -1.0 107,572 - A4249_RS00610 0.17 +1.3 107,572 - A4249_RS00610 0.17 -0.2 107,572 - A4249_RS00610 0.17 -0.3 108,013 + A4249_RS00610 0.37 -0.5 108,013 + A4249_RS00610 0.37 +0.3 108,013 + A4249_RS00610 0.37 +0.2 108,013 + A4249_RS00610 0.37 -1.1 108,013 + A4249_RS00610 0.37 -0.1 108,014 - A4249_RS00610 0.37 -0.0 108,014 - A4249_RS00610 0.37 +0.6 108,014 - A4249_RS00610 0.37 -0.5
Or see this region's nucleotide sequence