Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00390 and A4249_RS00395 are separated by 12 nucleotides A4249_RS00395 and A4249_RS00400 are separated by 123 nucleotides A4249_RS00400 and A4249_RS16425 are separated by 316 nucleotides
A4249_RS00390: A4249_RS00390 - helix-turn-helix transcriptional regulator, at 65,920 to 66,138
_RS00390
A4249_RS00395: A4249_RS00395 - DUF2975 domain-containing protein, at 66,151 to 66,678
_RS00395
A4249_RS00400: A4249_RS00400 - YdiU family protein, at 66,802 to 68,214
_RS00400
A4249_RS16425: A4249_RS16425 - hypothetical protein, at 68,531 to 69,388
_RS16425
Position (kb) 66
67
68
69 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 66.233 kb on - strand, within A4249_RS00395 at 66.257 kb on + strand, within A4249_RS00395 at 66.258 kb on - strand, within A4249_RS00395 at 66.258 kb on - strand, within A4249_RS00395 at 66.258 kb on - strand, within A4249_RS00395 at 66.659 kb on + strand at 66.660 kb on - strand at 66.660 kb on - strand at 66.660 kb on - strand at 66.727 kb on + strand at 66.727 kb on + strand at 66.790 kb on + strand at 66.790 kb on + strand at 66.790 kb on + strand at 66.791 kb on - strand at 66.791 kb on - strand at 66.791 kb on - strand at 66.791 kb on - strand at 66.791 kb on - strand at 66.791 kb on - strand at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.954 kb on + strand, within A4249_RS00400 at 66.955 kb on - strand, within A4249_RS00400 at 66.955 kb on - strand, within A4249_RS00400 at 66.955 kb on - strand, within A4249_RS00400 at 66.955 kb on - strand, within A4249_RS00400 at 67.031 kb on + strand, within A4249_RS00400 at 67.031 kb on + strand, within A4249_RS00400 at 67.152 kb on + strand, within A4249_RS00400 at 67.152 kb on + strand, within A4249_RS00400 at 67.153 kb on - strand, within A4249_RS00400 at 67.153 kb on - strand, within A4249_RS00400 at 67.153 kb on - strand, within A4249_RS00400 at 67.233 kb on + strand, within A4249_RS00400 at 67.234 kb on - strand, within A4249_RS00400 at 67.234 kb on - strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.235 kb on + strand, within A4249_RS00400 at 67.236 kb on - strand, within A4249_RS00400 at 67.236 kb on - strand, within A4249_RS00400 at 67.236 kb on - strand, within A4249_RS00400 at 67.236 kb on - strand, within A4249_RS00400 at 67.236 kb on - strand, within A4249_RS00400 at 67.355 kb on + strand, within A4249_RS00400 at 67.355 kb on + strand, within A4249_RS00400 at 67.355 kb on + strand, within A4249_RS00400 at 67.356 kb on - strand, within A4249_RS00400 at 67.356 kb on - strand, within A4249_RS00400 at 67.356 kb on - strand, within A4249_RS00400 at 67.400 kb on + strand, within A4249_RS00400 at 67.400 kb on + strand, within A4249_RS00400 at 67.401 kb on - strand, within A4249_RS00400 at 67.427 kb on + strand, within A4249_RS00400 at 67.427 kb on + strand, within A4249_RS00400 at 67.428 kb on - strand, within A4249_RS00400 at 67.580 kb on + strand, within A4249_RS00400 at 67.580 kb on + strand, within A4249_RS00400 at 67.580 kb on + strand, within A4249_RS00400 at 67.580 kb on + strand, within A4249_RS00400 at 67.580 kb on + strand, within A4249_RS00400 at 67.580 kb on + strand, within A4249_RS00400 at 67.581 kb on - strand, within A4249_RS00400 at 67.587 kb on + strand, within A4249_RS00400 at 67.587 kb on + strand, within A4249_RS00400 at 67.588 kb on - strand, within A4249_RS00400 at 67.634 kb on + strand, within A4249_RS00400 at 67.634 kb on + strand, within A4249_RS00400 at 67.635 kb on - strand, within A4249_RS00400 at 67.635 kb on - strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.964 kb on + strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 67.965 kb on - strand, within A4249_RS00400 at 68.156 kb on + strand at 68.156 kb on + strand at 68.156 kb on + strand at 68.156 kb on + strand at 68.157 kb on - strand at 68.157 kb on - strand at 68.194 kb on + strand at 68.195 kb on + strand at 68.222 kb on + strand at 68.222 kb on + strand at 68.222 kb on + strand at 68.223 kb on - strand at 68.223 kb on - strand at 68.223 kb on - strand at 68.223 kb on - strand at 68.331 kb on + strand at 68.331 kb on + strand at 68.331 kb on + strand at 68.331 kb on + strand at 68.331 kb on + strand at 68.331 kb on + strand at 68.331 kb on + strand at 68.332 kb on - strand at 68.332 kb on - strand at 68.332 kb on - strand at 68.332 kb on - strand at 68.350 kb on + strand at 68.351 kb on - strand at 68.351 kb on - strand at 68.351 kb on - strand at 68.450 kb on + strand at 68.478 kb on + strand at 68.478 kb on + strand at 68.478 kb on + strand at 68.478 kb on + strand at 68.478 kb on + strand at 68.478 kb on + strand at 68.479 kb on - strand at 68.479 kb on - strand at 68.479 kb on - strand at 68.483 kb on + strand at 68.483 kb on + strand at 68.483 kb on + strand at 68.484 kb on - strand at 68.484 kb on - strand at 68.484 kb on - strand at 68.484 kb on - strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.487 kb on + strand at 68.488 kb on - strand at 68.488 kb on - strand at 68.488 kb on - strand at 68.795 kb on + strand, within A4249_RS16425 at 68.796 kb on - strand, within A4249_RS16425 at 68.796 kb on - strand, within A4249_RS16425
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 66,233 - A4249_RS00395 0.16 -1.7 66,257 + A4249_RS00395 0.20 +0.2 66,258 - A4249_RS00395 0.20 +0.2 66,258 - A4249_RS00395 0.20 +0.4 66,258 - A4249_RS00395 0.20 -0.7 66,659 + +0.6 66,660 - +0.3 66,660 - -1.4 66,660 - +0.6 66,727 + -0.3 66,727 + +0.1 66,790 + -0.8 66,790 + +0.3 66,790 + -0.8 66,791 - +0.3 66,791 - -0.5 66,791 - +0.1 66,791 - +0.6 66,791 - -0.3 66,791 - -0.9 66,954 + A4249_RS00400 0.11 +0.2 66,954 + A4249_RS00400 0.11 +0.3 66,954 + A4249_RS00400 0.11 -0.4 66,954 + A4249_RS00400 0.11 +0.2 66,954 + A4249_RS00400 0.11 -0.0 66,954 + A4249_RS00400 0.11 +0.5 66,954 + A4249_RS00400 0.11 +1.6 66,954 + A4249_RS00400 0.11 -0.4 66,954 + A4249_RS00400 0.11 -1.5 66,954 + A4249_RS00400 0.11 -0.7 66,955 - A4249_RS00400 0.11 +1.2 66,955 - A4249_RS00400 0.11 -0.0 66,955 - A4249_RS00400 0.11 -0.3 66,955 - A4249_RS00400 0.11 +0.2 67,031 + A4249_RS00400 0.16 +0.6 67,031 + A4249_RS00400 0.16 +1.4 67,152 + A4249_RS00400 0.25 +0.5 67,152 + A4249_RS00400 0.25 -0.6 67,153 - A4249_RS00400 0.25 -1.3 67,153 - A4249_RS00400 0.25 -0.1 67,153 - A4249_RS00400 0.25 +0.2 67,233 + A4249_RS00400 0.31 -0.4 67,234 - A4249_RS00400 0.31 +0.5 67,234 - A4249_RS00400 0.31 -0.6 67,235 + A4249_RS00400 0.31 -0.1 67,235 + A4249_RS00400 0.31 +0.3 67,235 + A4249_RS00400 0.31 -0.8 67,235 + A4249_RS00400 0.31 +0.8 67,235 + A4249_RS00400 0.31 -0.8 67,235 + A4249_RS00400 0.31 +0.5 67,235 + A4249_RS00400 0.31 -1.4 67,235 + A4249_RS00400 0.31 -0.1 67,235 + A4249_RS00400 0.31 -1.0 67,236 - A4249_RS00400 0.31 +0.0 67,236 - A4249_RS00400 0.31 -0.8 67,236 - A4249_RS00400 0.31 -1.2 67,236 - A4249_RS00400 0.31 -1.7 67,236 - A4249_RS00400 0.31 +3.0 67,355 + A4249_RS00400 0.39 -0.6 67,355 + A4249_RS00400 0.39 -0.6 67,355 + A4249_RS00400 0.39 -0.6 67,356 - A4249_RS00400 0.39 -0.4 67,356 - A4249_RS00400 0.39 -2.4 67,356 - A4249_RS00400 0.39 -1.1 67,400 + A4249_RS00400 0.42 -0.5 67,400 + A4249_RS00400 0.42 +0.3 67,401 - A4249_RS00400 0.42 -1.1 67,427 + A4249_RS00400 0.44 -1.3 67,427 + A4249_RS00400 0.44 +0.6 67,428 - A4249_RS00400 0.44 -1.4 67,580 + A4249_RS00400 0.55 +2.6 67,580 + A4249_RS00400 0.55 -0.4 67,580 + A4249_RS00400 0.55 -0.4 67,580 + A4249_RS00400 0.55 +0.2 67,580 + A4249_RS00400 0.55 -0.2 67,580 + A4249_RS00400 0.55 -0.9 67,581 - A4249_RS00400 0.55 +1.7 67,587 + A4249_RS00400 0.56 -0.1 67,587 + A4249_RS00400 0.56 +0.8 67,588 - A4249_RS00400 0.56 +0.3 67,634 + A4249_RS00400 0.59 -1.8 67,634 + A4249_RS00400 0.59 +1.4 67,635 - A4249_RS00400 0.59 -1.1 67,635 - A4249_RS00400 0.59 +1.1 67,964 + A4249_RS00400 0.82 -0.9 67,964 + A4249_RS00400 0.82 +0.2 67,964 + A4249_RS00400 0.82 +0.9 67,964 + A4249_RS00400 0.82 +0.0 67,964 + A4249_RS00400 0.82 +0.4 67,964 + A4249_RS00400 0.82 -0.7 67,964 + A4249_RS00400 0.82 +0.5 67,965 - A4249_RS00400 0.82 +0.2 67,965 - A4249_RS00400 0.82 -1.9 67,965 - A4249_RS00400 0.82 -0.6 67,965 - A4249_RS00400 0.82 -0.5 67,965 - A4249_RS00400 0.82 -0.1 67,965 - A4249_RS00400 0.82 +0.3 67,965 - A4249_RS00400 0.82 +0.0 67,965 - A4249_RS00400 0.82 -0.5 68,156 + -0.8 68,156 + +0.0 68,156 + +1.3 68,156 + -0.1 68,157 - -0.3 68,157 - +1.4 68,194 + -1.1 68,195 + +0.1 68,222 + +0.3 68,222 + -0.1 68,222 + -1.4 68,223 - -0.0 68,223 - -1.7 68,223 - +0.3 68,223 - -0.7 68,331 + +0.5 68,331 + -0.4 68,331 + -1.1 68,331 + +0.4 68,331 + -0.2 68,331 + +0.2 68,331 + -2.1 68,332 - -0.3 68,332 - +0.1 68,332 - -0.1 68,332 - +0.1 68,350 + -0.4 68,351 - +0.6 68,351 - +1.9 68,351 - +0.4 68,450 + +0.0 68,478 + +1.0 68,478 + -0.5 68,478 + +1.0 68,478 + -0.9 68,478 + +1.4 68,478 + +0.0 68,479 - +0.0 68,479 - -0.1 68,479 - -0.6 68,483 + +0.4 68,483 + +0.2 68,483 + -0.1 68,484 - +0.8 68,484 - +0.0 68,484 - +0.6 68,484 - +0.1 68,487 + -0.0 68,487 + -0.3 68,487 + +0.5 68,487 + +0.2 68,487 + -0.3 68,487 + -1.3 68,487 + -2.3 68,487 + +0.4 68,488 - -0.1 68,488 - -1.2 68,488 - -1.1 68,795 + A4249_RS16425 0.31 -0.0 68,796 - A4249_RS16425 0.31 +0.1 68,796 - A4249_RS16425 0.31 +1.1
Or see this region's nucleotide sequence