Strain Fitness in Escherichia coli ECRC98 around JDDGAC_10725

Experiment: WM_JK32

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_JK32
1,921,540	+	kdpB	JDDGAC_10715	0.81	-1.1
1,921,566	+	kdpB	JDDGAC_10715	0.82	-0.6
1,921,566	+	kdpB	JDDGAC_10715	0.82	+0.2
1,921,566	+	kdpB	JDDGAC_10715	0.82	+0.3
1,921,566	+	kdpB	JDDGAC_10715	0.82	-1.2
1,921,567	-	kdpB	JDDGAC_10715	0.82	-0.2
1,921,570	+	kdpB	JDDGAC_10715	0.82	+0.7
1,921,640	+	kdpB	JDDGAC_10715	0.86	-1.3
1,921,640	+	kdpB	JDDGAC_10715	0.86	-0.1
1,921,651	+	kdpB	JDDGAC_10715	0.86	+0.8
1,921,676	+	kdpB	JDDGAC_10715	0.88	-0.5
1,921,687	-	kdpB	JDDGAC_10715	0.88	+1.8
1,921,802	+				-0.6
1,921,803	-				-1.0
1,921,838	-				+0.7
1,921,842	+				-0.8
1,921,851	-				+2.2
1,921,935	+				-1.7
1,921,972	-				+0.9
1,921,972	-				+0.1
1,922,170	-	kdpC	JDDGAC_10720	0.40	-2.5
1,922,170	-	kdpC	JDDGAC_10720	0.40	-0.1
1,922,228	+	kdpC	JDDGAC_10720	0.50	-0.3
1,922,228	+	kdpC	JDDGAC_10720	0.50	-0.0
1,922,229	-	kdpC	JDDGAC_10720	0.51	+0.6
1,922,229	-	kdpC	JDDGAC_10720	0.51	-0.2
1,922,253	-	kdpC	JDDGAC_10720	0.55	-0.2
1,922,328	+	kdpC	JDDGAC_10720	0.68	-0.1
1,922,328	+	kdpC	JDDGAC_10720	0.68	+0.9
1,922,329	-	kdpC	JDDGAC_10720	0.68	+0.4
1,922,422	+	kdpC	JDDGAC_10720	0.84	-0.3
1,922,423	-	kdpC	JDDGAC_10720	0.84	-0.4
1,922,423	-	kdpC	JDDGAC_10720	0.84	-0.8
1,922,447	-	kdpC	JDDGAC_10720	0.89	-1.6
1,922,449	-	kdpC	JDDGAC_10720	0.89	+1.2
1,922,665	+				+0.5
1,922,666	-				+0.5
1,922,846	-	kdpD	JDDGAC_10725	0.13	-0.3
1,923,092	+	kdpD	JDDGAC_10725	0.22	-0.7
1,923,092	+	kdpD	JDDGAC_10725	0.22	+0.4
1,923,093	-	kdpD	JDDGAC_10725	0.22	-0.1
1,923,267	+	kdpD	JDDGAC_10725	0.28	+1.0
1,923,268	-	kdpD	JDDGAC_10725	0.28	-0.2
1,923,281	-	kdpD	JDDGAC_10725	0.29	-1.3
1,923,356	+	kdpD	JDDGAC_10725	0.32	+0.5
1,923,356	+	kdpD	JDDGAC_10725	0.32	-0.1
1,923,421	-	kdpD	JDDGAC_10725	0.34	+0.4
1,923,677	-	kdpD	JDDGAC_10725	0.44	+0.6
1,923,744	+	kdpD	JDDGAC_10725	0.46	+1.4
1,923,745	-	kdpD	JDDGAC_10725	0.46	+0.3
1,923,797	+	kdpD	JDDGAC_10725	0.48	+2.1
1,923,797	+	kdpD	JDDGAC_10725	0.48	-0.8
1,923,798	-	kdpD	JDDGAC_10725	0.48	+0.1
1,923,801	+	kdpD	JDDGAC_10725	0.48	-0.6
1,923,802	-	kdpD	JDDGAC_10725	0.48	+1.7
1,923,802	-	kdpD	JDDGAC_10725	0.48	+1.2
1,923,865	+	kdpD	JDDGAC_10725	0.51	-1.4
1,923,932	+	kdpD	JDDGAC_10725	0.53	+0.5
1,924,002	-	kdpD	JDDGAC_10725	0.56	+1.5
1,924,047	+	kdpD	JDDGAC_10725	0.57	-0.4
1,924,047	+	kdpD	JDDGAC_10725	0.57	+0.2
1,924,047	+	kdpD	JDDGAC_10725	0.57	+0.8
1,924,048	-	kdpD	JDDGAC_10725	0.58	+0.5
1,924,048	-	kdpD	JDDGAC_10725	0.58	+0.3
1,924,117	+	kdpD	JDDGAC_10725	0.60	+1.1
1,924,171	+	kdpD	JDDGAC_10725	0.62	+0.2
1,924,172	-	kdpD	JDDGAC_10725	0.62	+0.7
1,924,528	-	kdpD	JDDGAC_10725	0.75	-0.8
1,924,660	+	kdpD	JDDGAC_10725	0.80	+0.4
1,924,660	+	kdpD	JDDGAC_10725	0.80	+0.3
1,924,661	-	kdpD	JDDGAC_10725	0.80	-0.8
1,924,734	+	kdpD	JDDGAC_10725	0.83	-0.0
1,924,812	+	kdpD	JDDGAC_10725	0.86	-0.5
1,924,812	+	kdpD	JDDGAC_10725	0.86	+0.5
1,924,932	+				+0.3
1,924,996	+				-0.1
1,924,996	+				+0.7
1,925,068	-				+1.1
1,925,076	+				+0.1
1,925,089	+				+1.0
1,925,092	+				-0.7
1,925,135	-				+0.6
1,925,135	-				+1.4
1,925,183	-				+0.8
1,925,270	-	kdpE	JDDGAC_10730	0.13	+0.3
1,925,476	+	kdpE	JDDGAC_10730	0.43	-0.1
1,925,476	+	kdpE	JDDGAC_10730	0.43	+0.4
1,925,480	+	kdpE	JDDGAC_10730	0.44	-0.8
1,925,480	+	kdpE	JDDGAC_10730	0.44	+0.0
1,925,481	-	kdpE	JDDGAC_10730	0.44	+0.2
1,925,767	+	kdpE	JDDGAC_10730	0.86	-2.2
1,925,768	-	kdpE	JDDGAC_10730	0.86	-0.9
1,925,768	-	kdpE	JDDGAC_10730	0.86	-0.6
1,925,770	-	kdpE	JDDGAC_10730	0.86	+0.8
1,925,853	+				+0.5
1,925,905	-				+1.4
1,925,983	-				+0.6
1,925,983	-				+0.3
1,926,013	-				+0.2
1,926,019	-				+0.4
1,926,031	-				-0.2
1,926,092	+				+1.1
1,926,166	+	speFL	JDDGAC_10735	0.28	-2.0
1,926,169	-	speFL	JDDGAC_10735	0.30	+0.3
1,926,184	+	speFL	JDDGAC_10735	0.45	-0.8