Strain Fitness in Escherichia coli ECRC98 around JDDGAC_22605

Experiment: WM_K30

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_K30
4,325,428	-				-1.8
4,325,428	-				+0.6
4,325,457	+				-1.0
4,325,458	-				-0.4
4,325,541	-				-0.3
4,325,552	-				+0.4
4,325,565	-				+0.3
4,325,589	+				-0.9
4,325,590	-				-0.5
4,325,625	+				-0.6
4,325,625	+				-0.7
4,325,640	-				-0.1
4,325,644	+				-0.2
4,325,645	-				-2.8
4,325,673	-				+0.3
4,325,676	+				-1.4
4,325,677	-				-1.2
4,325,677	-				-1.4
4,325,690	+				-0.2
4,325,699	+				-1.1
4,325,735	-	exbB	JDDGAC_22600	0.14	-1.1
4,325,768	-	exbB	JDDGAC_22600	0.19	-2.2
4,325,879	-	exbB	JDDGAC_22600	0.34	+0.7
4,325,951	+	exbB	JDDGAC_22600	0.44	-0.4
4,325,960	+	exbB	JDDGAC_22600	0.45	-4.3
4,325,960	+	exbB	JDDGAC_22600	0.45	-1.2
4,325,961	-	exbB	JDDGAC_22600	0.45	-0.7
4,325,996	-	exbB	JDDGAC_22600	0.50	+1.1
4,326,071	+	exbB	JDDGAC_22600	0.60	-1.8
4,326,166	+	exbB	JDDGAC_22600	0.73	+0.5
4,326,210	-	exbB	JDDGAC_22600	0.79	+0.7
4,326,213	+	exbB	JDDGAC_22600	0.79	-1.6
4,326,213	+	exbB	JDDGAC_22600	0.79	-1.2
4,326,213	+	exbB	JDDGAC_22600	0.79	-0.7
4,326,213	+	exbB	JDDGAC_22600	0.79	-0.7
4,326,213	+	exbB	JDDGAC_22600	0.79	-1.7
4,326,213	+	exbB	JDDGAC_22600	0.79	-0.4
4,326,215	+	exbB	JDDGAC_22600	0.79	-1.4
4,326,216	-	exbB	JDDGAC_22600	0.80	-0.5
4,326,220	+	exbB	JDDGAC_22600	0.80	-1.1
4,326,422	+	exbD	JDDGAC_22605	0.12	-0.8
4,326,512	+	exbD	JDDGAC_22605	0.33	-2.1
4,326,564	+	exbD	JDDGAC_22605	0.45	-0.2
4,326,564	+	exbD	JDDGAC_22605	0.45	-0.6
4,326,565	-	exbD	JDDGAC_22605	0.45	-0.7
4,326,660	-	exbD	JDDGAC_22605	0.68	-0.5
4,326,706	-	exbD	JDDGAC_22605	0.78	+0.9
4,326,724	+	exbD	JDDGAC_22605	0.83	-1.4
4,326,725	-	exbD	JDDGAC_22605	0.83	+0.3
4,326,760	+				-2.5
4,326,760	+				+1.4
4,326,760	+				-1.1
4,326,760	+				+0.2
4,326,801	-				-0.3
4,326,818	+				-0.4
4,326,908	+				+0.4
4,327,075	+				+0.2
4,327,076	-				+1.0
4,327,076	-				-0.1
4,327,118	+				+1.0
4,327,118	+				+0.1
4,327,118	+				+0.3
4,327,119	-				-0.5
4,327,143	-				+0.7
4,327,148	+				-0.1
4,327,148	+				-0.3
4,327,149	-				+0.2
4,327,149	-				-0.1
4,327,149	-				+0.4
4,327,149	-				+0.1
4,327,149	-				-0.6
4,327,150	+				-0.2
4,327,150	+				-0.4
4,327,150	+				+0.0
4,327,150	+				-0.3
4,327,150	+				+0.1
4,327,150	+				+0.4
4,327,150	+				-0.1
4,327,150	+				-0.8
4,327,150	+				-0.6
4,327,151	-				-1.1
4,327,151	-				+0.6
4,327,151	-				-0.9
4,327,151	-				+0.3
4,327,151	-				-0.4
4,327,219	-	yghA	JDDGAC_22615	0.17	+0.3
4,327,219	-	yghA	JDDGAC_22615	0.17	-0.5
4,327,219	-	yghA	JDDGAC_22615	0.17	+0.3
4,327,278	+	yghA	JDDGAC_22615	0.24	+0.2
4,327,278	+	yghA	JDDGAC_22615	0.24	+1.0
4,327,279	-	yghA	JDDGAC_22615	0.24	+0.3
4,327,290	+	yghA	JDDGAC_22615	0.25	+0.8
4,327,290	+	yghA	JDDGAC_22615	0.25	-0.1
4,327,329	-	yghA	JDDGAC_22615	0.29	-0.2
4,327,358	+	yghA	JDDGAC_22615	0.33	-0.0
4,327,358	+	yghA	JDDGAC_22615	0.33	-1.0
4,327,359	-	yghA	JDDGAC_22615	0.33	-0.8
4,327,413	+	yghA	JDDGAC_22615	0.39	-1.2
4,327,413	+	yghA	JDDGAC_22615	0.39	+0.6
4,327,413	+	yghA	JDDGAC_22615	0.39	+1.4
4,327,414	-	yghA	JDDGAC_22615	0.39	+0.0
4,327,414	-	yghA	JDDGAC_22615	0.39	+0.1
4,327,414	-	yghA	JDDGAC_22615	0.39	+1.0
4,327,521	+	yghA	JDDGAC_22615	0.51	+0.4
4,327,576	+	yghA	JDDGAC_22615	0.57	-0.1
4,327,584	+	yghA	JDDGAC_22615	0.58	-0.2
4,327,715	+	yghA	JDDGAC_22615	0.73	+0.0
4,327,715	+	yghA	JDDGAC_22615	0.73	+0.2
4,327,748	+	yghA	JDDGAC_22615	0.77	+0.7
4,327,748	+	yghA	JDDGAC_22615	0.77	+0.4