Experiment: WM_K30
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhaJ and yhaI are separated by 50 nucleotides yhaI and yhaH are separated by 240 nucleotides yhaH and yqjG are separated by 291 nucleotides
JDDGAC_22085: yhaJ - DNA-binding transcriptional regulator YhaJ, at 4,224,128 to 4,225,024
yhaJ
JDDGAC_22090: yhaI - Inner membrane protein YhaI, at 4,225,075 to 4,225,431
yhaI
JDDGAC_22095: yhaH - Inner membrane protein YhaH, at 4,225,672 to 4,226,037
yhaH
JDDGAC_22100: yqjG - glutathionyl-hydroquinone reductase YqjG, at 4,226,329 to 4,227,315
yqjG
Position (kb) 4225
4226
4227 Strain fitness (log2 ratio) -1
0
1 at 4224.694 kb on - strand, within yhaJ at 4224.769 kb on - strand, within yhaJ at 4224.883 kb on + strand, within yhaJ at 4224.883 kb on + strand, within yhaJ at 4224.940 kb on + strand at 4224.940 kb on + strand at 4224.943 kb on + strand at 4225.168 kb on - strand, within yhaI at 4225.220 kb on - strand, within yhaI at 4225.220 kb on - strand, within yhaI at 4225.268 kb on + strand, within yhaI at 4225.268 kb on + strand, within yhaI at 4225.268 kb on + strand, within yhaI at 4225.275 kb on + strand, within yhaI at 4225.276 kb on - strand, within yhaI at 4225.324 kb on - strand, within yhaI at 4225.353 kb on + strand, within yhaI at 4225.412 kb on - strand at 4225.421 kb on + strand at 4225.483 kb on - strand at 4225.515 kb on + strand at 4225.515 kb on + strand at 4225.516 kb on - strand at 4225.735 kb on - strand, within yhaH at 4225.749 kb on + strand, within yhaH at 4225.749 kb on + strand, within yhaH at 4225.750 kb on - strand, within yhaH at 4225.777 kb on + strand, within yhaH at 4225.778 kb on - strand, within yhaH at 4225.778 kb on - strand, within yhaH at 4225.778 kb on - strand, within yhaH at 4225.858 kb on - strand, within yhaH at 4225.938 kb on + strand, within yhaH at 4225.959 kb on + strand, within yhaH at 4226.090 kb on - strand at 4226.130 kb on + strand at 4226.154 kb on + strand at 4226.224 kb on - strand at 4226.336 kb on - strand at 4226.391 kb on + strand at 4226.415 kb on + strand at 4226.430 kb on - strand, within yqjG at 4226.487 kb on + strand, within yqjG at 4226.487 kb on + strand, within yqjG at 4226.488 kb on - strand, within yqjG at 4226.488 kb on - strand, within yqjG at 4226.511 kb on + strand, within yqjG at 4226.558 kb on + strand, within yqjG at 4226.558 kb on + strand, within yqjG at 4226.559 kb on - strand, within yqjG at 4226.559 kb on - strand, within yqjG at 4226.559 kb on - strand, within yqjG at 4226.559 kb on - strand, within yqjG at 4226.559 kb on - strand, within yqjG at 4226.644 kb on + strand, within yqjG at 4226.699 kb on + strand, within yqjG at 4226.699 kb on + strand, within yqjG at 4226.700 kb on - strand, within yqjG at 4226.731 kb on - strand, within yqjG at 4226.769 kb on + strand, within yqjG at 4226.804 kb on + strand, within yqjG at 4226.807 kb on + strand, within yqjG at 4226.807 kb on + strand, within yqjG at 4226.808 kb on - strand, within yqjG at 4226.808 kb on - strand, within yqjG at 4226.922 kb on + strand, within yqjG at 4226.936 kb on + strand, within yqjG at 4226.937 kb on - strand, within yqjG at 4226.984 kb on + strand, within yqjG at 4226.985 kb on - strand, within yqjG
Per-strain Table
Position Strand Gene LocusTag Fraction WM_K30 remove 4,224,694 - yhaJ JDDGAC_22085 0.63 -0.1 4,224,769 - yhaJ JDDGAC_22085 0.71 +0.6 4,224,883 + yhaJ JDDGAC_22085 0.84 +0.6 4,224,883 + yhaJ JDDGAC_22085 0.84 -0.1 4,224,940 + -0.0 4,224,940 + -0.3 4,224,943 + +0.6 4,225,168 - yhaI JDDGAC_22090 0.26 -0.3 4,225,220 - yhaI JDDGAC_22090 0.41 -1.1 4,225,220 - yhaI JDDGAC_22090 0.41 +0.0 4,225,268 + yhaI JDDGAC_22090 0.54 +0.4 4,225,268 + yhaI JDDGAC_22090 0.54 -0.8 4,225,268 + yhaI JDDGAC_22090 0.54 +0.7 4,225,275 + yhaI JDDGAC_22090 0.56 -0.3 4,225,276 - yhaI JDDGAC_22090 0.56 +0.3 4,225,324 - yhaI JDDGAC_22090 0.70 -0.2 4,225,353 + yhaI JDDGAC_22090 0.78 -0.3 4,225,412 - +0.2 4,225,421 + +0.0 4,225,483 - -0.7 4,225,515 + +0.1 4,225,515 + +0.2 4,225,516 - -0.5 4,225,735 - yhaH JDDGAC_22095 0.17 -0.1 4,225,749 + yhaH JDDGAC_22095 0.21 +0.5 4,225,749 + yhaH JDDGAC_22095 0.21 +0.4 4,225,750 - yhaH JDDGAC_22095 0.21 +0.5 4,225,777 + yhaH JDDGAC_22095 0.29 -0.1 4,225,778 - yhaH JDDGAC_22095 0.29 +0.1 4,225,778 - yhaH JDDGAC_22095 0.29 +0.1 4,225,778 - yhaH JDDGAC_22095 0.29 +0.2 4,225,858 - yhaH JDDGAC_22095 0.51 -0.7 4,225,938 + yhaH JDDGAC_22095 0.73 +0.0 4,225,959 + yhaH JDDGAC_22095 0.78 +0.1 4,226,090 - +0.0 4,226,130 + +0.2 4,226,154 + +0.0 4,226,224 - -0.3 4,226,336 - -0.5 4,226,391 + -0.3 4,226,415 + +0.7 4,226,430 - yqjG JDDGAC_22100 0.10 +0.2 4,226,487 + yqjG JDDGAC_22100 0.16 +0.4 4,226,487 + yqjG JDDGAC_22100 0.16 -1.2 4,226,488 - yqjG JDDGAC_22100 0.16 +0.4 4,226,488 - yqjG JDDGAC_22100 0.16 +0.3 4,226,511 + yqjG JDDGAC_22100 0.18 +0.0 4,226,558 + yqjG JDDGAC_22100 0.23 -0.3 4,226,558 + yqjG JDDGAC_22100 0.23 -0.9 4,226,559 - yqjG JDDGAC_22100 0.23 +0.3 4,226,559 - yqjG JDDGAC_22100 0.23 +0.1 4,226,559 - yqjG JDDGAC_22100 0.23 -0.6 4,226,559 - yqjG JDDGAC_22100 0.23 +0.2 4,226,559 - yqjG JDDGAC_22100 0.23 -0.4 4,226,644 + yqjG JDDGAC_22100 0.32 +0.2 4,226,699 + yqjG JDDGAC_22100 0.37 +1.1 4,226,699 + yqjG JDDGAC_22100 0.37 -0.9 4,226,700 - yqjG JDDGAC_22100 0.38 -0.2 4,226,731 - yqjG JDDGAC_22100 0.41 -0.1 4,226,769 + yqjG JDDGAC_22100 0.45 +1.3 4,226,804 + yqjG JDDGAC_22100 0.48 +0.2 4,226,807 + yqjG JDDGAC_22100 0.48 -0.3 4,226,807 + yqjG JDDGAC_22100 0.48 -1.2 4,226,808 - yqjG JDDGAC_22100 0.49 -0.2 4,226,808 - yqjG JDDGAC_22100 0.49 -0.8 4,226,922 + yqjG JDDGAC_22100 0.60 -1.5 4,226,936 + yqjG JDDGAC_22100 0.61 +0.0 4,226,937 - yqjG JDDGAC_22100 0.62 -0.4 4,226,984 + yqjG JDDGAC_22100 0.66 -0.0 4,226,985 - yqjG JDDGAC_22100 0.66 +0.7
Or see this region's nucleotide sequence