Experiment: WM_K30
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ehaG and JDDGAC_19415 are separated by 43 nucleotides JDDGAC_19415 and yibL are separated by 644 nucleotides
JDDGAC_19410: ehaG - trimeric autotransporter adhesin EhaG, at 3,694,134 to 3,698,900
ehaG
JDDGAC_19415: JDDGAC_19415 - DUF3251 domain-containing protein, at 3,698,944 to 3,699,525
_19415
JDDGAC_19420: yibL - YibL family ribosome-associated protein, at 3,700,170 to 3,700,532
yibL
Position (kb)
3698
3699
3700 Strain fitness (log2 ratio)
-1
0
1 at 3697.958 kb on + strand, within ehaG at 3698.018 kb on + strand, within ehaG at 3698.085 kb on - strand, within ehaG at 3698.123 kb on + strand, within ehaG at 3698.123 kb on + strand, within ehaG at 3698.123 kb on + strand, within ehaG at 3698.124 kb on - strand, within ehaG at 3698.165 kb on + strand, within ehaG at 3698.165 kb on + strand, within ehaG at 3698.165 kb on + strand, within ehaG at 3698.165 kb on + strand, within ehaG at 3698.166 kb on - strand, within ehaG at 3698.166 kb on - strand, within ehaG at 3698.166 kb on - strand, within ehaG at 3698.168 kb on + strand, within ehaG at 3698.236 kb on - strand, within ehaG at 3698.327 kb on + strand, within ehaG at 3698.328 kb on - strand, within ehaG at 3698.328 kb on - strand, within ehaG at 3698.328 kb on - strand, within ehaG at 3698.333 kb on + strand, within ehaG at 3698.342 kb on + strand, within ehaG at 3698.411 kb on + strand, within ehaG at 3698.411 kb on + strand, within ehaG at 3698.412 kb on - strand, within ehaG at 3698.412 kb on - strand, within ehaG at 3698.420 kb on + strand, within ehaG at 3698.495 kb on + strand at 3698.496 kb on - strand at 3698.522 kb on + strand at 3698.582 kb on + strand at 3698.582 kb on + strand at 3698.583 kb on - strand at 3698.583 kb on - strand at 3698.583 kb on - strand at 3698.583 kb on - strand at 3698.584 kb on + strand at 3698.585 kb on - strand at 3698.598 kb on + strand at 3698.598 kb on + strand at 3698.598 kb on + strand at 3698.599 kb on - strand at 3698.599 kb on - strand at 3698.600 kb on + strand at 3698.600 kb on + strand at 3698.643 kb on - strand at 3698.671 kb on - strand at 3698.672 kb on + strand at 3698.673 kb on - strand at 3698.673 kb on - strand at 3698.707 kb on + strand at 3698.853 kb on - strand at 3698.854 kb on + strand at 3698.854 kb on + strand at 3698.925 kb on - strand at 3698.926 kb on + strand at 3699.192 kb on + strand, within JDDGAC_19415 at 3699.220 kb on + strand, within JDDGAC_19415 at 3699.387 kb on + strand, within JDDGAC_19415 at 3699.504 kb on + strand at 3699.683 kb on + strand at 3699.982 kb on + strand at 3699.999 kb on + strand at 3700.079 kb on - strand at 3700.144 kb on - strand at 3700.144 kb on - strand at 3700.184 kb on + strand at 3700.430 kb on - strand, within yibL
Per-strain Table
Position Strand Gene LocusTag Fraction WM_K30 remove 3,697,958 + ehaG JDDGAC_19410 0.80 -1.0 3,698,018 + ehaG JDDGAC_19410 0.81 +0.2 3,698,085 - ehaG JDDGAC_19410 0.83 -0.1 3,698,123 + ehaG JDDGAC_19410 0.84 +0.2 3,698,123 + ehaG JDDGAC_19410 0.84 -0.5 3,698,123 + ehaG JDDGAC_19410 0.84 +0.5 3,698,124 - ehaG JDDGAC_19410 0.84 +0.3 3,698,165 + ehaG JDDGAC_19410 0.85 -0.5 3,698,165 + ehaG JDDGAC_19410 0.85 -0.1 3,698,165 + ehaG JDDGAC_19410 0.85 -0.3 3,698,165 + ehaG JDDGAC_19410 0.85 +0.4 3,698,166 - ehaG JDDGAC_19410 0.85 -0.8 3,698,166 - ehaG JDDGAC_19410 0.85 +0.0 3,698,166 - ehaG JDDGAC_19410 0.85 -0.2 3,698,168 + ehaG JDDGAC_19410 0.85 +0.2 3,698,236 - ehaG JDDGAC_19410 0.86 +0.6 3,698,327 + ehaG JDDGAC_19410 0.88 -0.5 3,698,328 - ehaG JDDGAC_19410 0.88 -0.3 3,698,328 - ehaG JDDGAC_19410 0.88 +0.5 3,698,328 - ehaG JDDGAC_19410 0.88 -0.1 3,698,333 + ehaG JDDGAC_19410 0.88 -0.2 3,698,342 + ehaG JDDGAC_19410 0.88 -0.4 3,698,411 + ehaG JDDGAC_19410 0.90 -0.3 3,698,411 + ehaG JDDGAC_19410 0.90 -0.2 3,698,412 - ehaG JDDGAC_19410 0.90 +0.2 3,698,412 - ehaG JDDGAC_19410 0.90 -0.2 3,698,420 + ehaG JDDGAC_19410 0.90 -0.4 3,698,495 + -0.2 3,698,496 - +0.2 3,698,522 + -0.8 3,698,582 + -0.2 3,698,582 + -0.1 3,698,583 - -1.3 3,698,583 - +1.3 3,698,583 - -0.7 3,698,583 - +0.3 3,698,584 + +0.5 3,698,585 - +0.4 3,698,598 + -0.9 3,698,598 + +0.4 3,698,598 + -1.0 3,698,599 - +0.4 3,698,599 - -0.0 3,698,600 + +1.7 3,698,600 + -0.3 3,698,643 - +0.0 3,698,671 - -0.8 3,698,672 + -0.7 3,698,673 - +0.5 3,698,673 - -1.1 3,698,707 + +0.8 3,698,853 - -0.2 3,698,854 + -0.4 3,698,854 + +1.1 3,698,925 - +0.1 3,698,926 + -0.5 3,699,192 + JDDGAC_19415 0.43 +1.1 3,699,220 + JDDGAC_19415 0.47 -0.8 3,699,387 + JDDGAC_19415 0.76 +1.1 3,699,504 + +0.7 3,699,683 + -0.6 3,699,982 + +0.3 3,699,999 + -0.8 3,700,079 - +0.1 3,700,144 - +0.0 3,700,144 - +1.0 3,700,184 + +0.3 3,700,430 - yibL JDDGAC_19420 0.72 +0.1
Or see this region's nucleotide sequence