Strain Fitness in Erwinia amylovora T8 around OLJFJH_18495

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
3,878,556	+		OLJFJH_18485	0.77	+0.5
3,878,677	+				-0.9
3,878,678	-				-1.0
3,878,678	-				+2.0
3,878,708	+				-0.6
3,878,820	+				+0.6
3,878,828	+				+0.5
3,878,828	+				+0.3
3,878,828	+				-0.6
3,878,829	-				+0.8
3,878,831	-				-0.0
3,878,831	-				+0.2
3,878,831	-				-0.2
3,878,841	-				+0.8
3,878,987	-		OLJFJH_18490	0.13	-0.8
3,879,031	+		OLJFJH_18490	0.22	-0.6
3,879,032	-		OLJFJH_18490	0.22	+0.2
3,879,033	+		OLJFJH_18490	0.23	-0.5
3,879,033	+		OLJFJH_18490	0.23	-0.5
3,879,034	-		OLJFJH_18490	0.23	-0.8
3,879,034	-		OLJFJH_18490	0.23	+1.8
3,879,034	-		OLJFJH_18490	0.23	-0.3
3,879,066	+		OLJFJH_18490	0.30	+1.2
3,879,072	+		OLJFJH_18490	0.31	-0.0
3,879,072	+		OLJFJH_18490	0.31	+0.2
3,879,073	-		OLJFJH_18490	0.31	-0.4
3,879,081	+		OLJFJH_18490	0.33	-0.3
3,879,082	-		OLJFJH_18490	0.33	+1.0
3,879,154	+		OLJFJH_18490	0.49	+0.0
3,879,154	+		OLJFJH_18490	0.49	-0.8
3,879,154	+		OLJFJH_18490	0.49	-0.8
3,879,154	+		OLJFJH_18490	0.49	-0.3
3,879,154	+		OLJFJH_18490	0.49	+0.2
3,879,155	-		OLJFJH_18490	0.49	-0.1
3,879,158	+		OLJFJH_18490	0.49	-0.4
3,879,158	+		OLJFJH_18490	0.49	-0.5
3,879,158	+		OLJFJH_18490	0.49	+0.6
3,879,158	+		OLJFJH_18490	0.49	+3.0
3,879,158	+		OLJFJH_18490	0.49	-2.0
3,879,158	+		OLJFJH_18490	0.49	+0.8
3,879,158	+		OLJFJH_18490	0.49	+0.7
3,879,158	+		OLJFJH_18490	0.49	-0.5
3,879,158	+		OLJFJH_18490	0.49	-0.1
3,879,158	+		OLJFJH_18490	0.49	+1.4
3,879,158	+		OLJFJH_18490	0.49	-0.9
3,879,158	+		OLJFJH_18490	0.49	+0.0
3,879,158	+		OLJFJH_18490	0.49	+0.4
3,879,158	+		OLJFJH_18490	0.49	-0.9
3,879,158	+		OLJFJH_18490	0.49	+1.1
3,879,159	-		OLJFJH_18490	0.50	-0.9
3,879,159	-		OLJFJH_18490	0.50	+0.8
3,879,159	-		OLJFJH_18490	0.50	-0.1
3,879,159	-		OLJFJH_18490	0.50	+0.7
3,879,159	-		OLJFJH_18490	0.50	+0.1
3,879,159	-		OLJFJH_18490	0.50	-1.2
3,879,159	-		OLJFJH_18490	0.50	-0.1
3,879,159	-		OLJFJH_18490	0.50	+0.1
3,879,159	-		OLJFJH_18490	0.50	-0.5
3,879,159	-		OLJFJH_18490	0.50	-1.9
3,879,159	-		OLJFJH_18490	0.50	+0.5
3,879,159	-		OLJFJH_18490	0.50	-1.5
3,879,159	-		OLJFJH_18490	0.50	+0.8
3,879,159	-		OLJFJH_18490	0.50	-0.5
3,879,218	+		OLJFJH_18490	0.62	-0.2
3,879,218	+		OLJFJH_18490	0.62	+0.0
3,879,219	-		OLJFJH_18490	0.62	+3.9
3,879,219	-		OLJFJH_18490	0.62	-0.3
3,879,219	-		OLJFJH_18490	0.62	-0.6
3,879,254	-		OLJFJH_18490	0.70	-0.3
3,879,304	-		OLJFJH_18490	0.81	-1.2
3,879,335	-		OLJFJH_18490	0.87	-0.2
3,879,394	+				-0.1
3,879,445	+				+1.3
3,879,526	-				-0.8
3,879,526	-				-1.5
3,879,526	-				-1.9
3,879,627	-		OLJFJH_18495	0.59	-0.9
3,879,677	-				-0.9
3,879,687	-				-0.3
3,879,687	-				-0.7
3,879,691	+				-0.6
3,879,700	-				-0.6
3,879,731	-				-0.7
3,879,738	+				-0.7
3,879,739	-				-0.8
3,879,776	-				-2.1
3,879,776	-				-1.0
3,879,777	+				+1.9
3,879,973	+		OLJFJH_18500	0.12	-0.2
3,879,973	+		OLJFJH_18500	0.12	+1.3
3,880,208	-		OLJFJH_18500	0.32	-0.3
3,880,217	-		OLJFJH_18500	0.33	+0.4
3,880,247	+		OLJFJH_18500	0.35	-0.7
3,880,250	+		OLJFJH_18500	0.36	-0.8
3,880,250	+		OLJFJH_18500	0.36	+0.2
3,880,426	+		OLJFJH_18500	0.51	-0.6
3,880,426	+		OLJFJH_18500	0.51	-0.1
3,880,426	+		OLJFJH_18500	0.51	+0.5
3,880,426	+		OLJFJH_18500	0.51	-2.3
3,880,426	+		OLJFJH_18500	0.51	-0.6
3,880,427	-		OLJFJH_18500	0.51	-1.3
3,880,427	-		OLJFJH_18500	0.51	+0.5
3,880,447	+		OLJFJH_18500	0.53	-1.2
3,880,447	+		OLJFJH_18500	0.53	+0.0
3,880,455	+		OLJFJH_18500	0.53	-0.6
3,880,456	-		OLJFJH_18500	0.53	-1.3
3,880,456	-		OLJFJH_18500	0.53	+0.1
3,880,456	-		OLJFJH_18500	0.53	+1.2
3,880,456	-		OLJFJH_18500	0.53	+0.3
3,880,456	-		OLJFJH_18500	0.53	-0.5
3,880,551	+		OLJFJH_18500	0.62	+2.7
3,880,552	-		OLJFJH_18500	0.62	-0.1
3,880,552	-		OLJFJH_18500	0.62	+3.0
3,880,552	-		OLJFJH_18500	0.62	+0.5
3,880,596	-		OLJFJH_18500	0.66	+0.6