Strain Fitness in Erwinia amylovora T8 around OLJFJH_16940

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
3,579,374	-				+0.0
3,579,457	-				-0.4
3,579,595	+		OLJFJH_16935	0.16	+1.2
3,579,602	-		OLJFJH_16935	0.17	-1.7
3,579,628	+		OLJFJH_16935	0.20	-1.3
3,579,628	+		OLJFJH_16935	0.20	+1.2
3,579,654	+		OLJFJH_16935	0.23	-0.5
3,579,654	+		OLJFJH_16935	0.23	-0.5
3,579,654	+		OLJFJH_16935	0.23	-0.9
3,579,800	+		OLJFJH_16935	0.40	-1.4
3,579,800	+		OLJFJH_16935	0.40	-0.3
3,579,852	+		OLJFJH_16935	0.45	+0.1
3,579,917	-		OLJFJH_16935	0.53	-1.9
3,579,974	-		OLJFJH_16935	0.59	-0.5
3,580,052	+		OLJFJH_16935	0.68	-0.1
3,580,113	+		OLJFJH_16935	0.75	-1.7
3,580,113	+		OLJFJH_16935	0.75	-0.3
3,580,113	+		OLJFJH_16935	0.75	-1.9
3,580,113	+		OLJFJH_16935	0.75	-0.3
3,580,113	+		OLJFJH_16935	0.75	-0.4
3,580,113	+		OLJFJH_16935	0.75	+0.3
3,580,114	-		OLJFJH_16935	0.75	-0.6
3,580,114	-		OLJFJH_16935	0.75	-1.7
3,580,114	-		OLJFJH_16935	0.75	-1.2
3,580,114	-		OLJFJH_16935	0.75	-2.2
3,580,114	-		OLJFJH_16935	0.75	-1.8
3,580,114	-		OLJFJH_16935	0.75	-1.3
3,580,166	-		OLJFJH_16935	0.81	-1.0
3,580,296	-				+0.1
3,580,328	+				-0.1
3,580,329	-				-0.5
3,580,329	-				+1.2
3,580,332	+				-1.2
3,580,390	-				-2.3
3,580,392	+				-0.0
3,580,392	+				+0.3
3,580,393	-				-1.1
3,580,525	+		OLJFJH_16940	0.17	-1.3
3,580,540	+		OLJFJH_16940	0.18	+3.7
3,580,541	-		OLJFJH_16940	0.18	-1.3
3,580,541	-		OLJFJH_16940	0.18	-0.9
3,580,739	+		OLJFJH_16940	0.35	-0.9
3,580,739	+		OLJFJH_16940	0.35	-1.8
3,580,739	+		OLJFJH_16940	0.35	-0.4
3,580,739	+		OLJFJH_16940	0.35	-1.5
3,580,739	+		OLJFJH_16940	0.35	-0.6
3,580,740	-		OLJFJH_16940	0.35	-1.3
3,580,740	-		OLJFJH_16940	0.35	-0.3
3,580,740	-		OLJFJH_16940	0.35	-1.3
3,580,740	-		OLJFJH_16940	0.35	-3.2
3,580,740	-		OLJFJH_16940	0.35	-1.3
3,580,740	-		OLJFJH_16940	0.35	-2.0
3,580,740	-		OLJFJH_16940	0.35	-3.2
3,580,986	+		OLJFJH_16940	0.56	-1.5
3,581,450	+				-1.1
3,581,499	+				-1.1
3,581,500	-				-0.9
3,581,500	-				+0.1
3,581,501	+				-2.9
3,581,564	+				+0.4
3,581,700	-				-0.5
3,581,700	-				-0.3
3,582,009	-		OLJFJH_16945	0.35	-1.5
3,582,077	-		OLJFJH_16945	0.40	-0.9
3,582,093	-		OLJFJH_16945	0.41	-0.7