Strain Fitness in Erwinia amylovora T8 around OLJFJH_14925
Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5 |
---|---|---|---|---|---|
remove | |||||
3,152,439 | - | -2.5 | |||
3,152,550 | + | OLJFJH_14925 | 0.14 | -1.0 | |
3,152,551 | - | OLJFJH_14925 | 0.15 | -2.2 | |
3,152,710 | + | +1.0 | |||
3,152,793 | + | +0.6 | |||
3,152,793 | + | -0.1 | |||
3,152,794 | - | -2.8 | |||
3,152,858 | + | OLJFJH_14930 | 0.57 | -0.2 | |
3,152,859 | - | OLJFJH_14930 | 0.57 | -1.1 | |
3,152,948 | + | OLJFJH_14930 | 0.88 | -2.1 | |
3,152,949 | - | OLJFJH_14930 | 0.89 | -2.1 | |
3,152,949 | - | OLJFJH_14930 | 0.89 | -0.3 | |
3,152,949 | - | OLJFJH_14930 | 0.89 | +0.9 | |
3,153,104 | - | -0.1 | |||
3,153,134 | - | +0.4 | |||
3,153,138 | - | -0.9 | |||
3,153,158 | + | +0.7 | |||
3,153,158 | + | +1.0 | |||
3,153,171 | - | -0.4 | |||
3,153,227 | + | +0.3 | |||
3,153,802 | + | -0.7 | |||
3,153,802 | + | +5.6 | |||
3,153,803 | - | -1.0 |
Or see this region's nucleotide sequence