Strain Fitness in Erwinia amylovora T8 around OLJFJH_13835

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
2,914,792	+		OLJFJH_13830	0.12	-1.1
2,914,824	+		OLJFJH_13830	0.16	+0.2
2,914,860	+		OLJFJH_13830	0.21	+0.7
2,914,908	+		OLJFJH_13830	0.27	-1.4
2,914,908	+		OLJFJH_13830	0.27	+0.5
2,914,909	-		OLJFJH_13830	0.27	+0.3
2,914,909	-		OLJFJH_13830	0.27	-2.1
2,914,925	+		OLJFJH_13830	0.29	+0.9
2,914,926	-		OLJFJH_13830	0.29	+1.4
2,915,065	+		OLJFJH_13830	0.46	-1.1
2,915,065	+		OLJFJH_13830	0.46	-0.0
2,915,066	-		OLJFJH_13830	0.46	+1.8
2,915,196	+		OLJFJH_13830	0.62	-0.4
2,915,208	+		OLJFJH_13830	0.64	-0.1
2,915,368	-		OLJFJH_13830	0.84	+0.1
2,915,514	+				+0.1
2,915,515	-				-0.4
2,915,515	-				-0.1
2,915,552	+				-0.7
2,915,553	-				-0.2
2,915,555	-				+0.3
2,915,583	-				+2.3
2,915,606	+				-0.9
2,915,787	-				+0.6
2,915,793	+				-0.5
2,915,817	+				-0.0
2,915,920	-		OLJFJH_13835	0.31	-0.6
2,916,055	+		OLJFJH_13835	0.63	-0.8
2,916,066	+		OLJFJH_13835	0.66	-1.2
2,916,066	+		OLJFJH_13835	0.66	-1.9
2,916,076	-		OLJFJH_13835	0.68	-0.7
2,916,085	-		OLJFJH_13835	0.70	+0.0
2,916,118	-		OLJFJH_13835	0.78	-1.3
2,916,203	-				-0.1
2,916,203	-				+0.6
2,916,274	+				-0.7
2,916,274	+				+1.1
2,916,275	-				-0.7
2,916,276	+				-0.8
2,916,276	+				+0.0
2,916,277	-				-0.9
2,916,277	-				-0.0
2,916,437	+				+0.2
2,916,438	-				-0.1
2,916,501	-				-1.1
2,916,573	+				+0.1
2,916,678	+				-2.0
2,916,679	-				+0.9
2,916,679	-				-0.4
2,916,838	+				-0.1
2,916,843	+				-0.5
2,916,843	+				-0.4
2,916,844	-				+0.8
2,916,847	-				-0.2
2,916,990	+				-0.4
2,917,000	+				+1.0
2,917,004	+				-0.6
2,917,004	+				-1.2
2,917,005	-				-0.8
2,917,035	+				+2.1
2,917,071	+				-0.0
2,917,072	-				+4.6