Strain Fitness in Erwinia amylovora T8 around OLJFJH_10685
Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5 |
|---|---|---|---|---|---|
| remove | |||||
| 2,210,616 | - | +0.2 | |||
| 2,210,654 | - | +0.2 | |||
| 2,210,713 | - | OLJFJH_10685 | 0.28 | -1.9 | |
| 2,210,835 | + | OLJFJH_10685 | 0.89 | -1.2 | |
| 2,210,982 | + | -0.8 | |||
| 2,210,982 | + | +0.5 | |||
| 2,211,096 | - | OLJFJH_10690 | 0.16 | -1.7 | |
| 2,211,137 | - | OLJFJH_10690 | 0.18 | -0.6 | |
| 2,211,230 | - | OLJFJH_10690 | 0.24 | -0.3 | |
| 2,211,230 | - | OLJFJH_10690 | 0.24 | -0.7 | |
| 2,211,256 | + | OLJFJH_10690 | 0.26 | -0.5 | |
| 2,211,256 | + | OLJFJH_10690 | 0.26 | -1.1 |
Or see this region's nucleotide sequence