Strain Fitness in Erwinia amylovora T8 around OLJFJH_08080

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
1,669,554	+				-0.4
1,669,554	+				-0.1
1,669,555	-				+4.5
1,669,555	-				+1.5
1,669,697	-		OLJFJH_08070	0.18	-0.4
1,669,793	-		OLJFJH_08070	0.43	-2.8
1,669,793	-		OLJFJH_08070	0.43	+0.2
1,669,833	+		OLJFJH_08070	0.54	+0.1
1,669,833	+		OLJFJH_08070	0.54	-1.6
1,669,834	-		OLJFJH_08070	0.54	+2.0
1,669,835	+		OLJFJH_08070	0.54	-0.1
1,669,836	-		OLJFJH_08070	0.54	-0.4
1,669,836	-		OLJFJH_08070	0.54	-1.1
1,669,836	-		OLJFJH_08070	0.54	-0.6
1,669,836	-		OLJFJH_08070	0.54	-0.1
1,669,848	+		OLJFJH_08070	0.58	-1.2
1,669,848	+		OLJFJH_08070	0.58	-1.5
1,669,849	-		OLJFJH_08070	0.58	-0.5
1,669,854	+		OLJFJH_08070	0.59	-0.5
1,669,907	+		OLJFJH_08070	0.73	+0.2
1,669,907	+		OLJFJH_08070	0.73	-0.3
1,669,907	+		OLJFJH_08070	0.73	+0.0
1,669,907	+		OLJFJH_08070	0.73	+0.7
1,669,908	-		OLJFJH_08070	0.73	+0.3
1,669,908	-		OLJFJH_08070	0.73	-0.5
1,669,908	-		OLJFJH_08070	0.73	+1.1
1,669,908	-		OLJFJH_08070	0.73	+0.1
1,669,908	-		OLJFJH_08070	0.73	-0.4
1,669,943	+		OLJFJH_08070	0.82	+0.0
1,669,944	-		OLJFJH_08070	0.83	+0.1
1,669,944	-		OLJFJH_08070	0.83	+0.1
1,669,995	-				-1.1
1,670,021	+				+0.5
1,670,021	+				-1.2
1,670,022	-				-0.7
1,670,054	-				+0.7
1,670,091	+				+2.3
1,670,091	+				+0.0
1,670,091	+				+1.4
1,670,299	+		OLJFJH_08075	0.55	-0.4
1,670,300	-		OLJFJH_08075	0.56	-0.5
1,670,300	-		OLJFJH_08075	0.56	-0.9
1,670,403	+		OLJFJH_08075	0.80	-0.6
1,670,403	+		OLJFJH_08075	0.80	+0.1
1,670,403	+		OLJFJH_08075	0.80	+0.4
1,670,404	-		OLJFJH_08075	0.80	-0.5
1,670,475	-				+0.0
1,670,479	+				+1.9
1,670,479	+				+0.8
1,670,480	-				-0.9
1,670,480	-				+0.4
1,670,480	-				+0.6
1,670,517	+				+0.5
1,670,517	+				-0.5
1,670,538	+				+1.7
1,670,538	+				+1.6
1,670,539	-				-1.0
1,670,636	+				+0.5
1,670,637	-				+0.4
1,670,637	-				-0.2
1,670,637	-				-0.2
1,670,693	+		OLJFJH_08080	0.13	+0.0
1,670,765	+		OLJFJH_08080	0.20	-0.9
1,670,765	+		OLJFJH_08080	0.20	+0.8
1,670,774	+		OLJFJH_08080	0.21	+1.3
1,670,775	-		OLJFJH_08080	0.21	+2.6
1,670,806	+		OLJFJH_08080	0.24	+1.4
1,670,807	-		OLJFJH_08080	0.24	+2.7
1,670,807	-		OLJFJH_08080	0.24	+1.5
1,670,894	+		OLJFJH_08080	0.32	-0.0
1,671,010	+		OLJFJH_08080	0.43	+0.0
1,671,125	-		OLJFJH_08080	0.53	-0.6
1,671,393	+		OLJFJH_08080	0.78	+1.8
1,671,393	+		OLJFJH_08080	0.78	-0.5
1,671,632	+				+0.2
1,671,633	-				+0.2
1,671,633	-				-0.0
1,671,633	-				-0.6
1,671,722	+		OLJFJH_08085	0.11	+0.8
1,671,723	-		OLJFJH_08085	0.12	+0.5
1,671,723	-		OLJFJH_08085	0.12	-0.5
1,671,798	-		OLJFJH_08085	0.21	-0.1
1,671,861	-		OLJFJH_08085	0.29	+1.1
1,671,864	+		OLJFJH_08085	0.29	+2.4
1,671,864	+		OLJFJH_08085	0.29	+2.5
1,671,864	+		OLJFJH_08085	0.29	-0.0
1,671,864	-		OLJFJH_08085	0.29	+1.3
1,671,865	-		OLJFJH_08085	0.29	+0.4
1,671,865	-		OLJFJH_08085	0.29	-1.5
1,671,865	-		OLJFJH_08085	0.29	-2.1
1,671,865	-		OLJFJH_08085	0.29	-0.1
1,671,865	-		OLJFJH_08085	0.29	-0.4
1,671,870	+		OLJFJH_08085	0.30	+0.5
1,671,870	+		OLJFJH_08085	0.30	+2.2
1,671,902	+		OLJFJH_08085	0.34	+0.0
1,671,903	-		OLJFJH_08085	0.34	-0.5
1,671,903	-		OLJFJH_08085	0.34	-0.4
1,671,976	-		OLJFJH_08085	0.43	-0.4
1,672,016	-		OLJFJH_08085	0.48	-1.3
1,672,016	-		OLJFJH_08085	0.48	-0.6
1,672,303	+		OLJFJH_08085	0.84	+0.8
1,672,304	-		OLJFJH_08085	0.84	-0.1
1,672,304	-		OLJFJH_08085	0.84	-0.1
1,672,304	-		OLJFJH_08085	0.84	+3.1
1,672,358	+				+1.7
1,672,359	-				-1.0
1,672,362	+				+1.6
1,672,362	+				+0.1
1,672,362	+				-0.8
1,672,362	+				-0.4
1,672,362	+				-0.4
1,672,363	-				-0.7
1,672,363	-				-0.9
1,672,363	-				-0.6
1,672,363	-				-1.5
1,672,400	+				-0.6
1,672,401	-				-0.6
1,672,428	+				-0.7
1,672,429	-				+0.3
1,672,429	-				+1.6
1,672,431	+				-0.3
1,672,431	+				-0.3
1,672,431	+				+1.4
1,672,432	-				-0.2
1,672,432	-				-0.2
1,672,541	-		OLJFJH_08090	0.43	+0.3