Strain Fitness in Erwinia amylovora T8 around OLJFJH_06200

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-5
1,252,505	-				-0.1
1,252,550	+				+0.4
1,252,575	+				-0.0
1,252,575	+				+6.5
1,252,669	-		OLJFJH_06200	0.14	-0.4
1,252,679	+		OLJFJH_06200	0.16	-1.0
1,252,725	+		OLJFJH_06200	0.21	-0.8
1,252,725	+		OLJFJH_06200	0.21	-0.2
1,252,726	-		OLJFJH_06200	0.21	+0.5
1,252,839	+		OLJFJH_06200	0.35	+1.0
1,252,840	-		OLJFJH_06200	0.35	+0.0
1,252,848	-		OLJFJH_06200	0.36	-0.7
1,252,870	-		OLJFJH_06200	0.39	-0.8
1,253,081	-		OLJFJH_06200	0.64	-1.0
1,253,125	-		OLJFJH_06200	0.70	-1.0
1,253,157	+		OLJFJH_06200	0.73	+0.6
1,253,445	+				-1.4
1,253,445	+				-1.3
1,253,446	-				-1.0
1,253,446	-				-1.2
1,253,446	-				-0.3
1,253,464	+				+0.2
1,253,465	-				-0.2
1,253,477	+				+0.6
1,253,477	+				+1.2
1,253,477	+				+0.7
1,253,477	+				+1.0
1,253,477	+				-0.1
1,253,477	+				+0.0
1,253,477	+				+0.6
1,253,478	-				+0.1
1,253,478	-				+1.6
1,253,578	-		OLJFJH_06205	0.24	-0.2
1,253,580	+		OLJFJH_06205	0.24	+0.2
1,253,622	+		OLJFJH_06205	0.37	-0.6
1,253,773	-		OLJFJH_06205	0.81	-0.4
1,253,815	+				+0.7
1,253,868	+				-0.4
1,253,885	+				-1.3
1,253,885	+				-0.2
1,254,076	+		OLJFJH_06210	0.14	+1.2
1,254,233	+		OLJFJH_06210	0.24	-0.2
1,254,333	+		OLJFJH_06210	0.31	-1.3