Strain Fitness in Escherichia coli ECRC98 around JDDGAC_22115

Experiment: WM_EV240

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_EV240
4,227,332	-				-0.7
4,227,369	+				+1.1
4,227,370	-				-2.2
4,227,386	+				-1.8
4,227,418	-				-0.4
4,227,436	-	yqjF	JDDGAC_22105	0.11	-0.6
4,227,639	+	yqjF	JDDGAC_22105	0.53	+1.2
4,227,639	+	yqjF	JDDGAC_22105	0.53	+0.6
4,227,639	+	yqjF	JDDGAC_22105	0.53	-0.2
4,227,667	-	yqjF	JDDGAC_22105	0.58	+1.1
4,227,667	-	yqjF	JDDGAC_22105	0.58	-1.4
4,227,667	-	yqjF	JDDGAC_22105	0.58	-0.1
4,227,668	+	yqjF	JDDGAC_22105	0.59	-1.2
4,227,668	+	yqjF	JDDGAC_22105	0.59	-1.9
4,227,668	+	yqjF	JDDGAC_22105	0.59	+1.0
4,227,668	+	yqjF	JDDGAC_22105	0.59	-0.8
4,227,669	-	yqjF	JDDGAC_22105	0.59	+0.8
4,227,669	-	yqjF	JDDGAC_22105	0.59	-3.1
4,227,669	-	yqjF	JDDGAC_22105	0.59	+0.6
4,227,669	-	yqjF	JDDGAC_22105	0.59	-0.7
4,227,669	-	yqjF	JDDGAC_22105	0.59	-1.6
4,227,837	+				-1.2
4,227,868	-				-1.6
4,228,021	-	yqjK	JDDGAC_22110	0.19	+0.6
4,228,021	-	yqjK	JDDGAC_22110	0.19	-2.1
4,228,056	-	yqjK	JDDGAC_22110	0.31	-0.7
4,228,058	+	yqjK	JDDGAC_22110	0.32	+1.6
4,228,122	+	yqjK	JDDGAC_22110	0.53	+1.2
4,228,130	+	yqjK	JDDGAC_22110	0.56	-0.4
4,228,218	-	yqjK	JDDGAC_22110	0.85	+0.1
4,228,232	+	yqjK	JDDGAC_22110	0.90	+1.1
4,228,440	+	yqjE	JDDGAC_22115	0.46	+0.9
4,228,444	+	yqjE	JDDGAC_22115	0.47	+0.2
4,228,444	+	yqjE	JDDGAC_22115	0.47	+1.3
4,228,445	-	yqjE	JDDGAC_22115	0.48	+0.9
4,228,656	+				+2.6
4,228,660	+				-0.8
4,228,690	-	yqjD	JDDGAC_22120	0.10	+2.1
4,228,741	+	yqjD	JDDGAC_22120	0.27	+0.3
4,228,741	+	yqjD	JDDGAC_22120	0.27	-3.6
4,228,742	-	yqjD	JDDGAC_22120	0.27	-2.3
4,228,742	-	yqjD	JDDGAC_22120	0.27	+0.1
4,228,742	-	yqjD	JDDGAC_22120	0.27	+0.2
4,228,854	-	yqjD	JDDGAC_22120	0.64	+0.7
4,228,854	-	yqjD	JDDGAC_22120	0.64	+0.3
4,228,889	+	yqjD	JDDGAC_22120	0.75	+0.3
4,228,889	+	yqjD	JDDGAC_22120	0.75	+1.8
4,228,889	+	yqjD	JDDGAC_22120	0.75	+1.1
4,228,889	+	yqjD	JDDGAC_22120	0.75	-1.6
4,228,890	-	yqjD	JDDGAC_22120	0.75	-1.0
4,228,890	-	yqjD	JDDGAC_22120	0.75	+0.3
4,228,890	-	yqjD	JDDGAC_22120	0.75	+0.4
4,228,890	-	yqjD	JDDGAC_22120	0.75	+0.2
4,228,890	-	yqjD	JDDGAC_22120	0.75	-0.6
4,228,964	+				+1.7
4,228,964	+				-1.6
4,228,982	+				+0.8
4,228,983	-				-0.7
4,228,983	-				+0.4
4,228,983	-				+1.6
4,228,987	-				-3.1
4,228,987	-				-0.0
4,228,987	-				-0.9
4,228,987	-				-0.2
4,228,993	+				+0.8
4,229,217	+	yqjC	JDDGAC_22125	0.58	+1.3
4,229,232	+	yqjC	JDDGAC_22125	0.62	-0.7
4,229,261	+	yqjC	JDDGAC_22125	0.70	-0.5
4,229,280	+	yqjC	JDDGAC_22125	0.75	+0.8
4,229,315	+	yqjC	JDDGAC_22125	0.85	-0.4
4,229,315	+	yqjC	JDDGAC_22125	0.85	-2.7
4,229,316	-	yqjC	JDDGAC_22125	0.85	-0.2
4,229,399	+				-0.9
4,229,399	+				+2.5
4,229,400	-				+0.0
4,229,402	+				+0.5
4,229,402	+				+0.7
4,229,462	+				+1.2
4,229,564	+	mzrA	JDDGAC_22130	0.12	+0.3
4,229,600	-	mzrA	JDDGAC_22130	0.22	-1.6
4,229,600	-	mzrA	JDDGAC_22130	0.22	-1.4