Strain Fitness in Escherichia coli ECRC98 around JDDGAC_09675

Experiment: WM_EV240

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_EV240
1,715,800	+	ybjG	JDDGAC_09665	0.79	-1.5
1,715,815	+	ybjG	JDDGAC_09665	0.81	-3.8
1,715,848	+	ybjG	JDDGAC_09665	0.87	-2.1
1,715,848	+	ybjG	JDDGAC_09665	0.87	+0.0
1,715,848	+	ybjG	JDDGAC_09665	0.87	-0.7
1,715,849	-	ybjG	JDDGAC_09665	0.87	-2.3
1,715,849	-	ybjG	JDDGAC_09665	0.87	-0.2
1,715,856	-	ybjG	JDDGAC_09665	0.88	-2.5
1,715,946	+				-1.8
1,715,966	+				-0.0
1,715,966	+				-2.4
1,716,048	+				+0.7
1,716,146	+	deoR	JDDGAC_09670	0.21	+0.8
1,716,146	+	deoR	JDDGAC_09670	0.21	+1.2
1,716,146	+	deoR	JDDGAC_09670	0.21	-1.3
1,716,252	+	deoR	JDDGAC_09670	0.35	-3.2
1,716,252	+	deoR	JDDGAC_09670	0.35	-1.9
1,716,252	+	deoR	JDDGAC_09670	0.35	-1.1
1,716,253	-	deoR	JDDGAC_09670	0.35	-1.3
1,716,358	+	deoR	JDDGAC_09670	0.49	-2.5
1,716,494	+	deoR	JDDGAC_09670	0.67	-0.5
1,716,698	+				+2.4
1,716,698	+				+2.0
1,716,698	+				+0.5
1,716,724	+				+0.5
1,716,740	+				+0.7
1,716,748	+				+0.4
1,716,749	-				+2.0
1,717,074	-	dacC	JDDGAC_09675	0.24	+3.3
1,717,118	+	dacC	JDDGAC_09675	0.27	+1.1
1,717,259	+	dacC	JDDGAC_09675	0.39	+1.2
1,717,387	+	dacC	JDDGAC_09675	0.50	+1.0
1,717,539	-	dacC	JDDGAC_09675	0.62	-0.1
1,717,565	-	dacC	JDDGAC_09675	0.65	-1.1
1,717,737	-	dacC	JDDGAC_09675	0.79	+1.4
1,717,771	+	dacC	JDDGAC_09675	0.82	+0.5
1,717,771	+	dacC	JDDGAC_09675	0.82	+1.1
1,717,772	-	dacC	JDDGAC_09675	0.82	+1.3
1,717,772	-	dacC	JDDGAC_09675	0.82	-0.3
1,717,787	+	dacC	JDDGAC_09675	0.83	-0.0
1,717,982	-				-1.8
1,717,992	-				+0.4
1,718,023	-				-0.2
1,718,027	+				-1.3
1,718,028	-				-2.8
1,718,028	-				+0.8
1,718,028	-				+0.6
1,718,029	+				+0.1
1,718,030	-				-1.9
1,718,037	+				+1.0
1,718,043	-				+0.7
1,718,059	-				+2.1
1,718,111	-				-0.1
1,718,167	+				+0.3
1,718,168	-				+0.8
1,718,181	-				-3.7
1,718,260	+				+0.6
1,718,310	+	gstB	JDDGAC_09680	0.12	-0.9
1,718,310	+	gstB	JDDGAC_09680	0.12	+1.1
1,718,311	-	gstB	JDDGAC_09680	0.12	-2.5
1,718,316	-	gstB	JDDGAC_09680	0.13	+0.5
1,718,316	-	gstB	JDDGAC_09680	0.13	-1.2
1,718,471	+	gstB	JDDGAC_09680	0.37	-0.4
1,718,557	+	gstB	JDDGAC_09680	0.51	-0.4
1,718,862	-				+0.3
1,718,880	+				+0.9
1,718,884	+				-0.1
1,718,917	+				-2.4
1,718,977	-	yliI	JDDGAC_09685	0.10	-2.7