Strain Fitness in Escherichia coli ECRC98 around JDDGAC_07730

Experiment: WM_EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntterC and terB are separated by 22 nucleotidesterB and terA are separated by 22 nucleotides JDDGAC_07725: terC - tellurium resistance membrane protein TerC, at 1,338,349 to 1,339,389 terC JDDGAC_07730: terB - Tellurium resistance protein TerB, at 1,339,412 to 1,339,867 terB JDDGAC_07735: terA - tellurium resistance protein TerA, at 1,339,890 to 1,341,047 terA Position (kb) 1339 1340Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1338.434 kb on + strandat 1338.435 kb on - strandat 1338.435 kb on - strandat 1338.592 kb on - strand, within terCat 1338.592 kb on - strand, within terCat 1338.625 kb on - strand, within terCat 1338.626 kb on + strand, within terCat 1338.627 kb on - strand, within terCat 1338.627 kb on - strand, within terCat 1338.820 kb on - strand, within terCat 1338.877 kb on - strand, within terCat 1338.964 kb on - strand, within terCat 1338.967 kb on - strand, within terCat 1338.986 kb on + strand, within terCat 1339.065 kb on - strand, within terCat 1339.303 kb on - strandat 1339.315 kb on - strandat 1339.389 kb on + strandat 1339.390 kb on - strandat 1339.516 kb on + strand, within terBat 1339.527 kb on - strand, within terBat 1339.573 kb on - strand, within terBat 1339.573 kb on - strand, within terBat 1339.658 kb on - strand, within terBat 1339.758 kb on - strand, within terBat 1339.758 kb on - strand, within terBat 1339.834 kb on + strandat 1339.868 kb on - strandat 1339.983 kb on - strandat 1340.136 kb on - strand, within terAat 1340.136 kb on - strand, within terAat 1340.144 kb on - strand, within terAat 1340.163 kb on - strand, within terAat 1340.208 kb on + strand, within terAat 1340.301 kb on - strand, within terAat 1340.301 kb on - strand, within terAat 1340.301 kb on - strand, within terAat 1340.561 kb on + strand, within terAat 1340.592 kb on - strand, within terAat 1340.640 kb on - strand, within terAat 1340.643 kb on - strand, within terAat 1340.643 kb on - strand, within terAat 1340.840 kb on + strand, within terAat 1340.841 kb on - strand, within terAat 1340.852 kb on - strand, within terA

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_EV240
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1,338,434 + -0.8
1,338,435 - -0.7
1,338,435 - +0.3
1,338,592 - terC JDDGAC_07725 0.23 +1.9
1,338,592 - terC JDDGAC_07725 0.23 +0.7
1,338,625 - terC JDDGAC_07725 0.27 +0.8
1,338,626 + terC JDDGAC_07725 0.27 +0.2
1,338,627 - terC JDDGAC_07725 0.27 +0.8
1,338,627 - terC JDDGAC_07725 0.27 +0.5
1,338,820 - terC JDDGAC_07725 0.45 +1.3
1,338,877 - terC JDDGAC_07725 0.51 +1.2
1,338,964 - terC JDDGAC_07725 0.59 +0.9
1,338,967 - terC JDDGAC_07725 0.59 +1.6
1,338,986 + terC JDDGAC_07725 0.61 +1.4
1,339,065 - terC JDDGAC_07725 0.69 +1.7
1,339,303 - +1.0
1,339,315 - +0.1
1,339,389 + -1.3
1,339,390 - -2.4
1,339,516 + terB JDDGAC_07730 0.23 +0.8
1,339,527 - terB JDDGAC_07730 0.25 -1.2
1,339,573 - terB JDDGAC_07730 0.35 +3.1
1,339,573 - terB JDDGAC_07730 0.35 +1.2
1,339,658 - terB JDDGAC_07730 0.54 -1.1
1,339,758 - terB JDDGAC_07730 0.76 +1.9
1,339,758 - terB JDDGAC_07730 0.76 +0.7
1,339,834 + -2.9
1,339,868 - +1.7
1,339,983 - +0.8
1,340,136 - terA JDDGAC_07735 0.21 +0.9
1,340,136 - terA JDDGAC_07735 0.21 -0.7
1,340,144 - terA JDDGAC_07735 0.22 +0.7
1,340,163 - terA JDDGAC_07735 0.24 -2.5
1,340,208 + terA JDDGAC_07735 0.27 +0.4
1,340,301 - terA JDDGAC_07735 0.35 +1.1
1,340,301 - terA JDDGAC_07735 0.35 -0.5
1,340,301 - terA JDDGAC_07735 0.35 -3.7
1,340,561 + terA JDDGAC_07735 0.58 -0.0
1,340,592 - terA JDDGAC_07735 0.61 +0.5
1,340,640 - terA JDDGAC_07735 0.65 -0.9
1,340,643 - terA JDDGAC_07735 0.65 +0.7
1,340,643 - terA JDDGAC_07735 0.65 -0.9
1,340,840 + terA JDDGAC_07735 0.82 +0.1
1,340,841 - terA JDDGAC_07735 0.82 -1.9
1,340,852 - terA JDDGAC_07735 0.83 +0.5

Or see this region's nucleotide sequence