Strain Fitness in Escherichia coli ECRC98 around JDDGAC_14210

Experiment: WM_EV240

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsZ and ftsA are separated by 60 nucleotidesftsA and ftsQ overlap by 4 nucleotidesftsQ and ddlB are separated by 1 nucleotides JDDGAC_14200: ftsZ - cell division protein FtsZ, at 2,634,928 to 2,636,079 ftsZ JDDGAC_14210: ftsA - cell division protein FtsA, at 2,636,140 to 2,637,402 ftsA JDDGAC_14215: ftsQ - cell division protein FtsQ, at 2,637,399 to 2,638,229 ftsQ JDDGAC_14220: ddlB - D-alanine--D-alanine ligase, at 2,638,231 to 2,639,151 ddlB Position (kb) 2636 2637 2638Strain fitness (log2 ratio) -2 -1 0 1at 2637.469 kb on - strandat 2638.259 kb on - strandat 2638.279 kb on - strandat 2638.378 kb on - strand, within ddlB

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_EV240
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2,637,469 - -1.9
2,638,259 - -2.3
2,638,279 - -0.2
2,638,378 - ddlB JDDGAC_14220 0.16 +0.1

Or see this region's nucleotide sequence