Strain Fitness in Escherichia coli ECRC98 around JDDGAC_12850

Experiment: WM_TP12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_TP12
2,380,997	+				+0.3
2,381,109	+				+0.1
2,381,126	+				-1.3
2,381,131	+				-0.2
2,381,265	+				+0.4
2,381,309	+	ykgK,ecpR	JDDGAC_12845	0.12	+0.1
2,381,512	+	ykgK,ecpR	JDDGAC_12845	0.50	+0.7
2,381,539	+	ykgK,ecpR	JDDGAC_12845	0.55	-1.7
2,381,769	+				+0.5
2,381,799	-				-1.9
2,381,933	-	ecpA	JDDGAC_12850	0.13	+0.4
2,381,987	+	ecpA	JDDGAC_12850	0.22	-0.1
2,382,028	-	ecpA	JDDGAC_12850	0.29	-0.4
2,382,067	+	ecpA	JDDGAC_12850	0.35	-1.1
2,382,067	+	ecpA	JDDGAC_12850	0.35	-0.1
2,382,129	-	ecpA	JDDGAC_12850	0.46	+0.7
2,382,357	-	ecpA	JDDGAC_12850	0.85	-0.1
2,382,376	-	ecpA	JDDGAC_12850	0.88	+0.3
2,382,444	+				+1.2
2,382,458	+				+0.0
2,382,484	+				+0.6
2,382,504	-				-0.4
2,382,579	-	ecpB	JDDGAC_12855	0.11	+1.0
2,382,580	+	ecpB	JDDGAC_12855	0.11	-1.0
2,382,580	+	ecpB	JDDGAC_12855	0.11	-0.1
2,382,580	+	ecpB	JDDGAC_12855	0.11	-0.1
2,382,580	+	ecpB	JDDGAC_12855	0.11	+0.9
2,382,580	+	ecpB	JDDGAC_12855	0.11	+0.6
2,382,733	+	ecpB	JDDGAC_12855	0.34	-0.2
2,382,734	-	ecpB	JDDGAC_12855	0.34	+0.4
2,382,792	+	ecpB	JDDGAC_12855	0.43	+0.4
2,382,792	+	ecpB	JDDGAC_12855	0.43	-0.2
2,382,792	+	ecpB	JDDGAC_12855	0.43	-1.1
2,382,793	-	ecpB	JDDGAC_12855	0.43	-0.2
2,382,793	-	ecpB	JDDGAC_12855	0.43	+0.1
2,382,793	-	ecpB	JDDGAC_12855	0.43	-1.8
2,382,793	-	ecpB	JDDGAC_12855	0.43	+0.3
2,382,793	-	ecpB	JDDGAC_12855	0.43	-2.2
2,382,795	-	ecpB	JDDGAC_12855	0.43	-0.6
2,382,952	-	ecpB	JDDGAC_12855	0.67	+0.1
2,383,066	-	ecpB	JDDGAC_12855	0.84	+0.1
2,383,066	-	ecpB	JDDGAC_12855	0.84	-0.7
2,383,151	+				+0.4
2,383,151	+				+0.1
2,383,171	-				+1.1
2,383,171	-				+0.8
2,383,171	-				-0.4
2,383,174	+				+0.5
2,383,174	+				+0.2
2,383,174	+				-0.2
2,383,174	+				+0.5
2,383,292	+				+0.4
2,383,293	-				+1.0
2,383,307	+				-0.4
2,383,372	+				+0.3
2,383,373	-				-0.3
2,383,373	-				+0.6
2,383,431	+				+1.5