Strain Fitness in Escherichia coli ECRC98 around JDDGAC_25655

Experiment: WM_Bas31

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas31
4,901,880	+		JDDGAC_25650	0.46	+0.2
4,901,884	-		JDDGAC_25650	0.46	+0.1
4,902,045	+		JDDGAC_25650	0.55	-0.8
4,902,045	+		JDDGAC_25650	0.55	-1.6
4,902,046	-		JDDGAC_25650	0.55	+0.5
4,902,074	+		JDDGAC_25650	0.57	+0.4
4,902,074	+		JDDGAC_25650	0.57	+1.1
4,902,074	+		JDDGAC_25650	0.57	+1.1
4,902,075	-		JDDGAC_25650	0.57	+2.1
4,902,075	-		JDDGAC_25650	0.57	-0.5
4,902,150	+		JDDGAC_25650	0.61	+0.4
4,902,170	+		JDDGAC_25650	0.62	+0.6
4,902,170	+		JDDGAC_25650	0.62	-1.5
4,902,171	-		JDDGAC_25650	0.62	+0.0
4,902,171	-		JDDGAC_25650	0.62	-1.0
4,902,197	+		JDDGAC_25650	0.64	+2.0
4,902,197	+		JDDGAC_25650	0.64	+0.5
4,902,447	+		JDDGAC_25650	0.77	+0.8
4,902,522	-		JDDGAC_25650	0.82	+0.0
4,902,559	-		JDDGAC_25650	0.84	-0.1
4,902,590	+		JDDGAC_25650	0.85	+0.7
4,902,591	-		JDDGAC_25650	0.85	+0.6
4,902,591	-		JDDGAC_25650	0.85	-1.2
4,902,614	+		JDDGAC_25650	0.87	-0.2
4,902,660	+		JDDGAC_25650	0.89	-1.7
4,902,661	-		JDDGAC_25650	0.89	+0.2
4,902,710	+				-2.1
4,902,710	+				-0.4
4,902,711	-				-0.0
4,902,711	-				+0.5
4,902,715	-				-0.0
4,902,715	-				-0.2
4,902,735	+				-0.4
4,902,735	+				-0.4
4,902,736	-				-0.5
4,902,764	+				+0.6
4,902,872	+				+0.5
4,902,872	+				-0.2
4,902,873	-				+0.2
4,902,873	-				-0.9
4,902,874	+				-0.1
4,902,874	+				+0.5
4,902,874	+				+0.7
4,902,874	+				-0.7
4,902,874	+				+0.2
4,902,922	+				+0.5
4,903,016	-				+1.6
4,903,017	+				-0.4
4,903,049	-				+0.1
4,903,091	+				-1.7
4,903,091	+				-0.7
4,903,091	+				+0.1
4,903,122	-		JDDGAC_25655	0.11	-1.3
4,903,127	+		JDDGAC_25655	0.11	+0.3
4,903,127	+		JDDGAC_25655	0.11	+0.7
4,903,127	+		JDDGAC_25655	0.11	+0.0
4,903,127	+		JDDGAC_25655	0.11	+0.4
4,903,127	+		JDDGAC_25655	0.11	+0.9
4,903,128	-		JDDGAC_25655	0.11	+0.6
4,903,131	+		JDDGAC_25655	0.11	+0.6
4,903,132	-		JDDGAC_25655	0.11	+0.2
4,903,132	-		JDDGAC_25655	0.11	+1.3
4,903,132	-		JDDGAC_25655	0.11	+0.9
4,903,132	-		JDDGAC_25655	0.11	+0.1
4,903,132	-		JDDGAC_25655	0.11	+0.8
4,903,169	+		JDDGAC_25655	0.13	+0.2
4,903,172	+		JDDGAC_25655	0.13	+1.0
4,903,173	-		JDDGAC_25655	0.13	+0.9
4,903,182	-		JDDGAC_25655	0.13	-0.8
4,903,194	-		JDDGAC_25655	0.14	+0.1
4,903,333	+		JDDGAC_25655	0.19	-0.9
4,903,333	+		JDDGAC_25655	0.19	+0.4
4,903,333	+		JDDGAC_25655	0.19	+0.7
4,903,333	+		JDDGAC_25655	0.19	-0.0
4,903,334	-		JDDGAC_25655	0.19	-2.0
4,903,336	-		JDDGAC_25655	0.19	+0.4
4,903,336	-		JDDGAC_25655	0.19	+1.7
4,903,336	-		JDDGAC_25655	0.19	+0.4
4,903,356	-		JDDGAC_25655	0.20	+0.5
4,903,356	-		JDDGAC_25655	0.20	-3.9
4,903,386	-		JDDGAC_25655	0.21	-0.3
4,903,411	+		JDDGAC_25655	0.22	-2.3
4,903,453	-		JDDGAC_25655	0.24	-0.4
4,903,487	+		JDDGAC_25655	0.25	-0.0
4,903,487	+		JDDGAC_25655	0.25	-1.2
4,903,517	+		JDDGAC_25655	0.27	-0.1
4,903,517	+		JDDGAC_25655	0.27	-0.0
4,903,518	-		JDDGAC_25655	0.27	-3.0
4,903,535	+		JDDGAC_25655	0.27	+1.5
4,903,537	+		JDDGAC_25655	0.27	+1.0
4,903,538	-		JDDGAC_25655	0.27	-1.1
4,903,538	-		JDDGAC_25655	0.27	-0.1
4,903,538	-		JDDGAC_25655	0.27	+0.5
4,903,538	-		JDDGAC_25655	0.27	-0.8
4,903,538	-		JDDGAC_25655	0.27	-0.1
4,903,541	+		JDDGAC_25655	0.28	+1.5
4,903,541	+		JDDGAC_25655	0.28	-1.4
4,903,557	+		JDDGAC_25655	0.28	-2.1
4,903,557	+		JDDGAC_25655	0.28	-0.4
4,903,557	+		JDDGAC_25655	0.28	+0.0
4,903,558	-		JDDGAC_25655	0.28	-2.4
4,903,623	+		JDDGAC_25655	0.31	+1.6
4,903,623	+		JDDGAC_25655	0.31	+0.7
4,903,623	+		JDDGAC_25655	0.31	+1.1
4,903,623	+		JDDGAC_25655	0.31	+1.6
4,903,624	-		JDDGAC_25655	0.31	+0.9
4,903,624	-		JDDGAC_25655	0.31	-1.9
4,903,625	+		JDDGAC_25655	0.31	-0.0
4,903,638	-		JDDGAC_25655	0.32	+0.4
4,903,653	-		JDDGAC_25655	0.32	-1.3
4,903,658	+		JDDGAC_25655	0.32	-0.2
4,903,659	-		JDDGAC_25655	0.32	-0.6
4,903,721	-		JDDGAC_25655	0.35	-0.6
4,903,752	+		JDDGAC_25655	0.36	-0.3
4,903,824	-		JDDGAC_25655	0.39	+2.0
4,903,842	+		JDDGAC_25655	0.40	-0.6
4,903,842	+		JDDGAC_25655	0.40	-0.8
4,903,842	+		JDDGAC_25655	0.40	+0.7
4,903,910	+		JDDGAC_25655	0.43	-1.2
4,903,911	-		JDDGAC_25655	0.43	-0.1
4,903,929	-		JDDGAC_25655	0.43	-0.9
4,903,966	-		JDDGAC_25655	0.45	+0.1
4,903,966	-		JDDGAC_25655	0.45	-0.0
4,903,973	+		JDDGAC_25655	0.45	+0.0
4,904,103	+		JDDGAC_25655	0.50	+1.4
4,904,104	-		JDDGAC_25655	0.50	-0.2
4,904,104	-		JDDGAC_25655	0.50	-1.4
4,904,104	-		JDDGAC_25655	0.50	+2.0
4,904,104	-		JDDGAC_25655	0.50	-0.9
4,904,165	+		JDDGAC_25655	0.53	+0.3
4,904,166	-		JDDGAC_25655	0.53	-0.2
4,904,166	-		JDDGAC_25655	0.53	+0.4
4,904,230	+		JDDGAC_25655	0.55	+0.3
4,904,230	+		JDDGAC_25655	0.55	-0.0
4,904,244	-		JDDGAC_25655	0.56	-0.7
4,904,322	-		JDDGAC_25655	0.59	-2.4
4,904,386	+		JDDGAC_25655	0.62	+0.8
4,904,386	+		JDDGAC_25655	0.62	-0.1
4,904,386	+		JDDGAC_25655	0.62	-0.1
4,904,386	+		JDDGAC_25655	0.62	+1.3
4,904,386	+		JDDGAC_25655	0.62	-0.6
4,904,387	-		JDDGAC_25655	0.62	-1.5
4,904,387	-		JDDGAC_25655	0.62	+2.1
4,904,476	+		JDDGAC_25655	0.65	-2.5
4,904,514	-		JDDGAC_25655	0.67	+0.2
4,904,516	+		JDDGAC_25655	0.67	-0.1
4,904,517	-		JDDGAC_25655	0.67	+0.3
4,904,520	-		JDDGAC_25655	0.67	+0.8
4,904,520	-		JDDGAC_25655	0.67	-0.0
4,904,543	+		JDDGAC_25655	0.68	+0.3
4,904,544	-		JDDGAC_25655	0.68	+0.4
4,904,567	+		JDDGAC_25655	0.69	+0.6
4,904,568	-		JDDGAC_25655	0.69	+0.9
4,904,568	-		JDDGAC_25655	0.69	+0.4
4,904,568	-		JDDGAC_25655	0.69	-1.0
4,904,657	+		JDDGAC_25655	0.73	-1.5
4,904,657	+		JDDGAC_25655	0.73	-1.1
4,904,657	+		JDDGAC_25655	0.73	+0.9
4,904,658	-		JDDGAC_25655	0.73	-0.5
4,904,658	-		JDDGAC_25655	0.73	-1.6
4,904,771	+		JDDGAC_25655	0.77	-2.3
4,904,772	-		JDDGAC_25655	0.77	-0.0
4,904,826	+		JDDGAC_25655	0.80	-0.6
4,904,827	-		JDDGAC_25655	0.80	+0.6
4,904,828	+		JDDGAC_25655	0.80	+0.5
4,904,828	+		JDDGAC_25655	0.80	+0.6
4,904,828	+		JDDGAC_25655	0.80	+1.1
4,904,828	+		JDDGAC_25655	0.80	-2.3
4,904,829	-		JDDGAC_25655	0.80	-2.9
4,904,829	-		JDDGAC_25655	0.80	-1.3
4,904,829	-		JDDGAC_25655	0.80	+1.1
4,904,903	+		JDDGAC_25655	0.83	+0.1
4,904,957	-		JDDGAC_25655	0.85	+0.2
4,904,982	+		JDDGAC_25655	0.86	+0.2
4,905,012	-		JDDGAC_25655	0.87	+1.0
4,905,012	-		JDDGAC_25655	0.87	+0.5
4,905,015	+		JDDGAC_25655	0.87	+0.7
4,905,073	+		JDDGAC_25655	0.89	-0.9
4,905,074	-		JDDGAC_25655	0.90	-2.3
4,905,100	+				-0.3
4,905,101	-				-1.6
4,905,101	-				+1.0
4,905,186	+				-0.1
4,905,190	+				-0.3
4,905,191	-				+1.6
4,905,191	-				-0.6
4,905,234	+				-0.3
4,905,249	+				-0.1
4,905,297	+				+1.7
4,905,297	+				-0.5
4,905,404	+		JDDGAC_25660	0.44	-0.7
4,905,405	-		JDDGAC_25660	0.45	+0.2
4,905,445	+		JDDGAC_25660	0.73	+0.3
4,905,458	-		JDDGAC_25660	0.82	-3.6
4,905,465	+		JDDGAC_25660	0.87	+1.1
4,905,465	+		JDDGAC_25660	0.87	+0.0
4,905,465	+		JDDGAC_25660	0.87	-1.2
4,905,466	-		JDDGAC_25660	0.88	-3.1
4,905,469	+				+1.5
4,905,469	+				+0.2
4,905,469	+				-0.5
4,905,469	+				+1.2
4,905,469	+				+0.8
4,905,470	-				+0.5
4,905,470	-				-0.1
4,905,470	-				+0.9
4,905,480	+				+1.1
4,905,576	+				-2.4
4,905,577	-				+0.1
4,905,665	+		JDDGAC_25665	0.17	+2.3
4,905,665	+		JDDGAC_25665	0.17	+0.5
4,905,665	+		JDDGAC_25665	0.17	-0.2
4,905,666	-		JDDGAC_25665	0.17	-0.7
4,905,666	-		JDDGAC_25665	0.17	+0.2
4,905,666	-		JDDGAC_25665	0.17	-2.5
4,905,803	+		JDDGAC_25665	0.37	-0.2
4,905,803	+		JDDGAC_25665	0.37	-0.5
4,905,803	+		JDDGAC_25665	0.37	-1.5
4,905,804	-		JDDGAC_25665	0.37	+0.1
4,905,804	-		JDDGAC_25665	0.37	-0.4
4,905,901	-		JDDGAC_25665	0.51	-0.0
4,905,901	-		JDDGAC_25665	0.51	+0.3
4,906,011	+		JDDGAC_25665	0.67	-1.3
4,906,124	+		JDDGAC_25665	0.83	+0.7
4,906,130	+		JDDGAC_25665	0.84	-1.1
4,906,130	+		JDDGAC_25665	0.84	+3.2
4,906,175	-				+0.3
4,906,190	+				-0.9
4,906,190	+				-0.6
4,906,190	+				-0.7
4,906,191	-				-0.0
4,906,276	+				-0.2
4,906,276	+				+0.9
4,906,276	+				+0.9