Strain Fitness in Escherichia coli ECRC98 around JDDGAC_24880

Experiment: WM_Bas31

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas31
4,757,237	-	yfiR	JDDGAC_24870	0.62	+0.3
4,757,248	-	yfiR	JDDGAC_24870	0.64	-0.9
4,757,268	+	yfiR	JDDGAC_24870	0.68	+0.4
4,757,273	-	yfiR	JDDGAC_24870	0.69	-0.5
4,757,310	-	yfiR	JDDGAC_24870	0.76	-0.0
4,757,310	-	yfiR	JDDGAC_24870	0.76	+0.0
4,757,408	-				-1.1
4,757,408	-				-1.9
4,757,472	-				+0.4
4,757,533	+				-1.2
4,757,581	-				+0.1
4,757,749	+	yfiL	JDDGAC_24875	0.46	-1.0
4,757,750	-	yfiL	JDDGAC_24875	0.46	+0.2
4,757,809	-	yfiL	JDDGAC_24875	0.62	+0.2
4,757,837	+	yfiL	JDDGAC_24875	0.70	-0.4
4,757,838	-	yfiL	JDDGAC_24875	0.70	-1.6
4,757,849	-	yfiL	JDDGAC_24875	0.73	-0.8
4,757,849	-	yfiL	JDDGAC_24875	0.73	+2.1
4,757,884	+	yfiL	JDDGAC_24875	0.83	+1.1
4,757,884	+	yfiL	JDDGAC_24875	0.83	+0.4
4,757,884	+	yfiL	JDDGAC_24875	0.83	-1.0
4,757,885	-	yfiL	JDDGAC_24875	0.83	-1.7
4,757,885	-	yfiL	JDDGAC_24875	0.83	+0.2
4,757,914	-				+0.3
4,758,035	+				+0.7
4,758,036	-				-0.7
4,758,036	-				-0.1
4,758,126	+				-1.9
4,758,183	+				-0.1
4,758,184	-				-0.9
4,758,184	-				-0.9
4,758,187	+				-2.3
4,758,187	+				+1.0
4,758,187	+				-0.0
4,758,188	-				-0.3
4,758,188	-				-0.8
4,758,207	+				-0.1
4,758,244	-				-1.2
4,758,295	+	aroF	JDDGAC_24880	0.13	-2.8
4,758,296	-	aroF	JDDGAC_24880	0.13	-1.0
4,758,296	-	aroF	JDDGAC_24880	0.13	-2.4
4,758,328	-	aroF	JDDGAC_24880	0.16	+0.0
4,758,328	-	aroF	JDDGAC_24880	0.16	-1.3
4,758,330	+	aroF	JDDGAC_24880	0.16	-2.5
4,758,330	+	aroF	JDDGAC_24880	0.16	+0.1
4,758,330	+	aroF	JDDGAC_24880	0.16	-1.6
4,758,331	-	aroF	JDDGAC_24880	0.16	-1.0
4,758,374	+	aroF	JDDGAC_24880	0.20	-0.0
4,758,389	-	aroF	JDDGAC_24880	0.22	+0.0
4,758,389	-	aroF	JDDGAC_24880	0.22	-0.5
4,758,441	-	aroF	JDDGAC_24880	0.26	+0.1
4,758,594	+	aroF	JDDGAC_24880	0.41	-0.3
4,758,594	+	aroF	JDDGAC_24880	0.41	-0.3
4,758,595	-	aroF	JDDGAC_24880	0.41	-1.9
4,758,631	+	aroF	JDDGAC_24880	0.44	-1.5
4,758,751	+	aroF	JDDGAC_24880	0.55	-1.7
4,758,823	-	aroF	JDDGAC_24880	0.62	+0.8
4,758,881	+	aroF	JDDGAC_24880	0.68	+0.1
4,758,952	-	aroF	JDDGAC_24880	0.74	-2.7
4,758,977	-	aroF	JDDGAC_24880	0.76	-3.2
4,759,048	+	aroF	JDDGAC_24880	0.83	+0.6
4,759,048	+	aroF	JDDGAC_24880	0.83	-0.4
4,759,069	+	aroF	JDDGAC_24880	0.85	-0.1
4,759,069	+	aroF	JDDGAC_24880	0.85	-1.5
4,759,069	+	aroF	JDDGAC_24880	0.85	-1.0
4,759,069	+	aroF	JDDGAC_24880	0.85	-0.3
4,759,073	-	aroF	JDDGAC_24880	0.85	-0.1
4,759,122	-				-1.3
4,759,128	+				-1.6
4,759,151	-				-0.0
4,759,227	-				-2.9
4,759,238	+				-0.8
4,759,239	-				-0.6
4,759,239	-				-1.1
4,759,239	-				-0.0
4,759,304	-				-0.8
4,759,367	+	tyrA	JDDGAC_24885	0.11	-0.9
4,759,367	+	tyrA	JDDGAC_24885	0.11	-0.2
4,759,371	+	tyrA	JDDGAC_24885	0.12	-1.5
4,759,371	+	tyrA	JDDGAC_24885	0.12	-1.5
4,759,372	-	tyrA	JDDGAC_24885	0.12	-2.7
4,759,372	-	tyrA	JDDGAC_24885	0.12	-1.4
4,759,394	+	tyrA	JDDGAC_24885	0.14	-1.0
4,759,394	+	tyrA	JDDGAC_24885	0.14	-0.1
4,759,395	-	tyrA	JDDGAC_24885	0.14	-0.5
4,759,395	-	tyrA	JDDGAC_24885	0.14	+0.5
4,759,511	+	tyrA	JDDGAC_24885	0.24	-2.6
4,759,545	-	tyrA	JDDGAC_24885	0.27	-1.2
4,759,682	+	tyrA	JDDGAC_24885	0.39	-1.1
4,759,713	-	tyrA	JDDGAC_24885	0.42	-0.7
4,759,784	-	tyrA	JDDGAC_24885	0.49	-1.2
4,759,955	+	tyrA	JDDGAC_24885	0.64	-0.1
4,759,982	+	tyrA	JDDGAC_24885	0.66	-1.1
4,760,015	+	tyrA	JDDGAC_24885	0.69	-2.1
4,760,015	+	tyrA	JDDGAC_24885	0.69	-0.2
4,760,026	-	tyrA	JDDGAC_24885	0.70	-0.8
4,760,145	+	tyrA	JDDGAC_24885	0.81	-1.9
4,760,156	+	tyrA	JDDGAC_24885	0.82	-0.9
4,760,156	+	tyrA	JDDGAC_24885	0.82	-1.2
4,760,156	+	tyrA	JDDGAC_24885	0.82	-0.7
4,760,156	+	tyrA	JDDGAC_24885	0.82	-1.4
4,760,157	-	tyrA	JDDGAC_24885	0.82	-0.6
4,760,157	-	tyrA	JDDGAC_24885	0.82	-0.5
4,760,157	-	tyrA	JDDGAC_24885	0.82	-2.6
4,760,159	+	tyrA	JDDGAC_24885	0.82	-1.5
4,760,159	+	tyrA	JDDGAC_24885	0.82	-2.7
4,760,159	+	tyrA	JDDGAC_24885	0.82	-1.1
4,760,159	+	tyrA	JDDGAC_24885	0.82	-1.6
4,760,159	+	tyrA	JDDGAC_24885	0.82	-0.0
4,760,159	+	tyrA	JDDGAC_24885	0.82	+0.6
4,760,160	-	tyrA	JDDGAC_24885	0.82	-1.2
4,760,160	-	tyrA	JDDGAC_24885	0.82	-1.7
4,760,174	+	tyrA	JDDGAC_24885	0.83	-0.9
4,760,199	+	tyrA	JDDGAC_24885	0.86	+0.2
4,760,199	+	tyrA	JDDGAC_24885	0.86	-0.4
4,760,199	+	tyrA	JDDGAC_24885	0.86	-0.3
4,760,200	-	tyrA	JDDGAC_24885	0.86	-0.1
4,760,200	-	tyrA	JDDGAC_24885	0.86	-0.0
4,760,200	-	tyrA	JDDGAC_24885	0.86	+1.7