Strain Fitness in Escherichia coli ECRC98 around JDDGAC_14075

Experiment: WM_Bas31

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas31
2,606,411	+	speD	JDDGAC_14065	0.48	-0.7
2,606,411	+	speD	JDDGAC_14065	0.48	-0.9
2,606,411	+	speD	JDDGAC_14065	0.48	-0.7
2,606,411	+	speD	JDDGAC_14065	0.48	-0.1
2,606,412	-	speD	JDDGAC_14065	0.48	-0.4
2,606,412	-	speD	JDDGAC_14065	0.48	+0.2
2,606,416	-	speD	JDDGAC_14065	0.49	-1.5
2,606,479	+	speD	JDDGAC_14065	0.57	+0.6
2,606,568	+	speD	JDDGAC_14065	0.68	-0.1
2,606,626	+	speD	JDDGAC_14065	0.75	+0.9
2,606,661	+	speD	JDDGAC_14065	0.79	+0.2
2,606,700	+	speD	JDDGAC_14065	0.84	-0.2
2,606,701	-	speD	JDDGAC_14065	0.85	-0.4
2,606,794	+				-0.1
2,606,794	+				+0.3
2,606,924	+	yacL	JDDGAC_14070	0.17	+0.2
2,606,946	+	yacL	JDDGAC_14070	0.23	-0.9
2,606,949	+	yacL	JDDGAC_14070	0.24	-1.2
2,607,034	+	yacL	JDDGAC_14070	0.48	+0.0
2,607,034	+	yacL	JDDGAC_14070	0.48	+0.1
2,607,034	+	yacL	JDDGAC_14070	0.48	+2.8
2,607,034	+	yacL	JDDGAC_14070	0.48	-0.2
2,607,034	+	yacL	JDDGAC_14070	0.48	-0.2
2,607,035	-	yacL	JDDGAC_14070	0.48	-1.4
2,607,035	-	yacL	JDDGAC_14070	0.48	+0.9
2,607,035	-	yacL	JDDGAC_14070	0.48	+2.0
2,607,035	-	yacL	JDDGAC_14070	0.48	+0.8
2,607,036	+	yacL	JDDGAC_14070	0.48	-0.6
2,607,036	+	yacL	JDDGAC_14070	0.48	+0.2
2,607,036	+	yacL	JDDGAC_14070	0.48	-0.6
2,607,037	-	yacL	JDDGAC_14070	0.48	+0.3
2,607,037	-	yacL	JDDGAC_14070	0.48	-0.2
2,607,037	-	yacL	JDDGAC_14070	0.48	+2.1
2,607,037	-	yacL	JDDGAC_14070	0.48	+0.1
2,607,175	+	yacL	JDDGAC_14070	0.87	+0.1
2,607,175	+	yacL	JDDGAC_14070	0.87	+0.6
2,607,175	+	yacL	JDDGAC_14070	0.87	-0.7
2,607,176	-	yacL	JDDGAC_14070	0.87	+0.7
2,607,176	-	yacL	JDDGAC_14070	0.87	+0.8
2,607,176	-	yacL	JDDGAC_14070	0.87	-0.6
2,607,176	-	yacL	JDDGAC_14070	0.87	-1.0
2,607,277	+				+0.1
2,607,278	-				+1.0
2,607,324	+				+0.2
2,607,401	-				+0.3
2,607,475	+				-1.3
2,607,476	-				-1.2
2,607,476	-				-0.1
2,607,495	-				-2.9
2,608,331	-	acnB	JDDGAC_14075	0.36	+0.3
2,609,050	-	acnB	JDDGAC_14075	0.64	-2.9
2,609,293	+	acnB	JDDGAC_14075	0.73	+0.2
2,609,573	-	acnB	JDDGAC_14075	0.84	-0.9
2,609,608	+	acnB	JDDGAC_14075	0.85	-0.0
2,610,150	-				+0.4
2,610,226	+				+0.9
2,610,282	+				+0.4
2,610,282	+				+2.6
2,610,282	+				-0.3
2,610,283	-				-0.8
2,610,371	+				+0.8
2,610,430	+				+0.6
2,610,432	+				-0.5
2,610,432	+				+1.0
2,610,432	+				+0.5
2,610,432	+				+0.3
2,610,433	-				+0.4
2,610,433	-				-0.1
2,610,434	+				-1.0
2,610,435	-				-0.0
2,610,435	-				+0.1
2,610,436	+				-0.0
2,610,436	+				+0.7
2,610,437	-				-1.9
2,610,437	-				-0.2
2,610,437	-				+0.5
2,610,437	-				-0.8
2,610,584	-	yacH	JDDGAC_14080	0.13	+0.0
2,610,584	-	yacH	JDDGAC_14080	0.13	+1.3
2,610,704	+	yacH	JDDGAC_14080	0.19	+2.0
2,610,705	-	yacH	JDDGAC_14080	0.19	-0.1
2,610,723	-	yacH	JDDGAC_14080	0.20	+1.0
2,610,761	+	yacH	JDDGAC_14080	0.22	+0.7
2,610,875	-	yacH	JDDGAC_14080	0.28	+1.3