Strain Fitness in Escherichia coli ECRC98 around JDDGAC_06295

Experiment: WM_Bas31

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas31
1,099,472	-				-0.3
1,099,508	-				-0.4
1,099,569	+				+1.0
1,099,698	-	ycgJ	JDDGAC_06290	0.32	+0.5
1,099,732	-	ycgJ	JDDGAC_06290	0.41	+0.1
1,099,740	-	ycgJ	JDDGAC_06290	0.43	+0.1
1,099,824	+	ycgJ	JDDGAC_06290	0.66	-1.7
1,099,824	+	ycgJ	JDDGAC_06290	0.66	-0.9
1,099,925	-				+1.1
1,099,943	-				+0.6
1,099,973	-				+0.2
1,099,973	-				-0.4
1,099,982	-				+1.3
1,100,032	+				-0.7
1,100,032	+				+1.6
1,100,075	-				+0.1
1,100,080	-				-0.4
1,100,099	+				-0.1
1,100,102	+				-0.3
1,100,395	+				-2.1
1,100,407	+				-0.4
1,100,407	+				-0.6
1,100,410	-				+0.9
1,100,451	+				+0.5
1,100,451	+				-1.1
1,100,451	+				-0.7
1,100,614	+	minC	JDDGAC_06295	0.21	-0.9
1,100,883	+	minC	JDDGAC_06295	0.59	-0.4
1,100,964	+	minC	JDDGAC_06295	0.71	-2.9
1,101,199	+				-0.1
1,101,208	+				+0.3
1,101,320	-	minD	JDDGAC_06300	0.16	+0.3
1,101,610	+	minD	JDDGAC_06300	0.52	-0.1
1,101,652	+	minD	JDDGAC_06300	0.57	+0.4
1,102,003	+				+0.9
1,102,138	+	minE	JDDGAC_06305	0.50	-0.3