Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10470 and A4249_RS16950 are separated by 47 nucleotides A4249_RS16950 and A4249_RS10480 are separated by 154 nucleotides A4249_RS10480 and A4249_RS10485 are separated by 5 nucleotides
A4249_RS10470: A4249_RS10470 - acetyl-CoA C-acyltransferase, at 2,106,616 to 2,107,812
_RS10470
A4249_RS16950: A4249_RS16950 - flavin reductase family protein, at 2,107,860 to 2,108,882
_RS16950
A4249_RS10480: A4249_RS10480 - DUF1190 domain-containing protein, at 2,109,037 to 2,109,663
_RS10480
A4249_RS10485: A4249_RS10485 - DUF350 domain-containing protein, at 2,109,669 to 2,110,082
_RS10485
Position (kb)
2107
2108
2109 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2107.260 kb on - strand, within A4249_RS10470 at 2107.260 kb on - strand, within A4249_RS10470 at 2107.260 kb on - strand, within A4249_RS10470 at 2107.289 kb on + strand, within A4249_RS10470 at 2107.289 kb on + strand, within A4249_RS10470 at 2107.289 kb on + strand, within A4249_RS10470 at 2107.289 kb on + strand, within A4249_RS10470 at 2107.290 kb on - strand, within A4249_RS10470 at 2107.290 kb on - strand, within A4249_RS10470 at 2107.340 kb on + strand, within A4249_RS10470 at 2107.340 kb on + strand, within A4249_RS10470 at 2107.340 kb on + strand, within A4249_RS10470 at 2107.340 kb on + strand, within A4249_RS10470 at 2107.341 kb on - strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.364 kb on + strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.365 kb on - strand, within A4249_RS10470 at 2107.427 kb on + strand, within A4249_RS10470 at 2107.427 kb on + strand, within A4249_RS10470 at 2107.428 kb on - strand, within A4249_RS10470 at 2107.769 kb on + strand at 2107.769 kb on + strand at 2107.769 kb on + strand at 2107.769 kb on + strand at 2107.769 kb on + strand at 2107.828 kb on + strand at 2107.828 kb on + strand at 2107.828 kb on + strand at 2107.829 kb on - strand at 2107.829 kb on - strand at 2107.844 kb on + strand at 2107.844 kb on + strand at 2107.844 kb on + strand at 2107.844 kb on + strand at 2107.844 kb on + strand at 2107.844 kb on + strand at 2107.844 kb on + strand at 2107.845 kb on - strand at 2107.845 kb on - strand at 2107.845 kb on - strand at 2107.845 kb on - strand at 2107.882 kb on + strand at 2107.883 kb on - strand at 2107.883 kb on - strand at 2107.897 kb on + strand at 2107.897 kb on + strand at 2107.898 kb on - strand at 2108.347 kb on + strand, within A4249_RS16950 at 2108.347 kb on + strand, within A4249_RS16950 at 2108.348 kb on - strand, within A4249_RS16950 at 2108.348 kb on - strand, within A4249_RS16950 at 2108.348 kb on - strand, within A4249_RS16950 at 2108.657 kb on + strand, within A4249_RS16950 at 2108.805 kb on + strand at 2108.806 kb on - strand at 2108.930 kb on + strand at 2108.930 kb on + strand at 2108.930 kb on + strand at 2108.930 kb on + strand at 2108.930 kb on + strand at 2108.931 kb on - strand at 2108.931 kb on - strand at 2108.931 kb on - strand at 2109.000 kb on + strand at 2109.000 kb on + strand at 2109.000 kb on + strand at 2109.000 kb on + strand at 2109.000 kb on + strand at 2109.000 kb on + strand at 2109.001 kb on - strand at 2109.001 kb on - strand at 2109.001 kb on - strand at 2109.001 kb on - strand at 2109.001 kb on - strand at 2109.004 kb on - strand at 2109.004 kb on - strand at 2109.035 kb on + strand at 2109.035 kb on + strand at 2109.035 kb on + strand at 2109.035 kb on + strand at 2109.035 kb on + strand at 2109.035 kb on + strand at 2109.036 kb on - strand at 2109.036 kb on - strand at 2109.036 kb on - strand at 2109.234 kb on - strand, within A4249_RS10480 at 2109.383 kb on + strand, within A4249_RS10480 at 2109.488 kb on + strand, within A4249_RS10480 at 2109.489 kb on - strand, within A4249_RS10480 at 2109.489 kb on - strand, within A4249_RS10480 at 2109.727 kb on + strand, within A4249_RS10485 at 2109.727 kb on + strand, within A4249_RS10485 at 2109.727 kb on + strand, within A4249_RS10485 at 2109.727 kb on + strand, within A4249_RS10485 at 2109.727 kb on + strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485 at 2109.728 kb on - strand, within A4249_RS10485
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,107,260 - A4249_RS10470 0.54 +0.1 2,107,260 - A4249_RS10470 0.54 +0.2 2,107,260 - A4249_RS10470 0.54 -0.6 2,107,289 + A4249_RS10470 0.56 -0.2 2,107,289 + A4249_RS10470 0.56 -0.4 2,107,289 + A4249_RS10470 0.56 -0.2 2,107,289 + A4249_RS10470 0.56 +0.3 2,107,290 - A4249_RS10470 0.56 +0.3 2,107,290 - A4249_RS10470 0.56 -0.1 2,107,340 + A4249_RS10470 0.60 +0.1 2,107,340 + A4249_RS10470 0.60 -0.3 2,107,340 + A4249_RS10470 0.60 -0.6 2,107,340 + A4249_RS10470 0.60 -0.8 2,107,341 - A4249_RS10470 0.61 +1.2 2,107,364 + A4249_RS10470 0.62 +0.2 2,107,364 + A4249_RS10470 0.62 +1.2 2,107,364 + A4249_RS10470 0.62 +0.5 2,107,364 + A4249_RS10470 0.62 -1.4 2,107,364 + A4249_RS10470 0.62 -1.1 2,107,364 + A4249_RS10470 0.62 -0.3 2,107,364 + A4249_RS10470 0.62 +0.5 2,107,365 - A4249_RS10470 0.63 -0.3 2,107,365 - A4249_RS10470 0.63 -0.5 2,107,365 - A4249_RS10470 0.63 -1.4 2,107,365 - A4249_RS10470 0.63 -0.2 2,107,365 - A4249_RS10470 0.63 -0.6 2,107,365 - A4249_RS10470 0.63 +0.0 2,107,365 - A4249_RS10470 0.63 -0.4 2,107,365 - A4249_RS10470 0.63 +0.4 2,107,365 - A4249_RS10470 0.63 +1.3 2,107,427 + A4249_RS10470 0.68 -0.8 2,107,427 + A4249_RS10470 0.68 -1.4 2,107,428 - A4249_RS10470 0.68 -0.7 2,107,769 + -0.1 2,107,769 + +0.2 2,107,769 + +0.2 2,107,769 + -0.5 2,107,769 + -0.7 2,107,828 + +0.6 2,107,828 + +1.0 2,107,828 + +0.3 2,107,829 - +0.4 2,107,829 - +0.2 2,107,844 + -0.4 2,107,844 + +0.2 2,107,844 + -1.1 2,107,844 + +0.0 2,107,844 + -0.9 2,107,844 + -0.9 2,107,844 + -1.1 2,107,845 - -0.8 2,107,845 - -0.5 2,107,845 - -0.5 2,107,845 - -1.2 2,107,882 + -0.7 2,107,883 - -0.3 2,107,883 - -0.3 2,107,897 + +0.6 2,107,897 + -0.2 2,107,898 - +0.9 2,108,347 + A4249_RS16950 0.48 -0.1 2,108,347 + A4249_RS16950 0.48 +1.1 2,108,348 - A4249_RS16950 0.48 +0.9 2,108,348 - A4249_RS16950 0.48 +0.1 2,108,348 - A4249_RS16950 0.48 +0.2 2,108,657 + A4249_RS16950 0.78 +1.3 2,108,805 + -0.1 2,108,806 - +0.2 2,108,930 + +0.7 2,108,930 + +0.4 2,108,930 + -0.4 2,108,930 + -0.4 2,108,930 + +0.6 2,108,931 - -3.0 2,108,931 - -0.2 2,108,931 - +0.6 2,109,000 + -0.3 2,109,000 + +0.0 2,109,000 + -0.7 2,109,000 + -0.5 2,109,000 + +0.3 2,109,000 + -1.2 2,109,001 - +1.4 2,109,001 - -0.9 2,109,001 - -2.1 2,109,001 - +0.2 2,109,001 - -0.2 2,109,004 - +0.6 2,109,004 - -1.3 2,109,035 + +0.5 2,109,035 + -2.5 2,109,035 + +0.7 2,109,035 + -0.6 2,109,035 + -0.8 2,109,035 + -0.2 2,109,036 - -0.3 2,109,036 - -0.1 2,109,036 - +1.0 2,109,234 - A4249_RS10480 0.31 -0.4 2,109,383 + A4249_RS10480 0.55 -1.4 2,109,488 + A4249_RS10480 0.72 -1.2 2,109,489 - A4249_RS10480 0.72 -0.9 2,109,489 - A4249_RS10480 0.72 -1.5 2,109,727 + A4249_RS10485 0.14 +0.2 2,109,727 + A4249_RS10485 0.14 -1.0 2,109,727 + A4249_RS10485 0.14 -0.6 2,109,727 + A4249_RS10485 0.14 -1.0 2,109,727 + A4249_RS10485 0.14 -1.1 2,109,728 - A4249_RS10485 0.14 -0.3 2,109,728 - A4249_RS10485 0.14 -0.4 2,109,728 - A4249_RS10485 0.14 -1.6 2,109,728 - A4249_RS10485 0.14 +1.3 2,109,728 - A4249_RS10485 0.14 +0.1 2,109,728 - A4249_RS10485 0.14 -0.1 2,109,728 - A4249_RS10485 0.14 -0.3
Or see this region's nucleotide sequence