Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11745

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11735 and A4249_RS17060 are separated by 11 nucleotidesA4249_RS17060 and A4249_RS11740 are separated by 7 nucleotidesA4249_RS11740 and A4249_RS11745 overlap by 4 nucleotidesA4249_RS11745 and A4249_RS11750 overlap by 4 nucleotides A4249_RS11735: A4249_RS11735 - heavy metal translocating P-type ATPase, at 2,354,684 to 2,357,245 _RS11735 A4249_RS17060: A4249_RS17060 - hypothetical protein, at 2,357,257 to 2,357,388 _RS17060 A4249_RS11740: A4249_RS11740 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,357,396 to 2,358,007 _RS11740 A4249_RS11745: A4249_RS11745 - cation transporter, at 2,358,004 to 2,358,609 _RS11745 A4249_RS11750: A4249_RS11750 - CusA/CzcA family heavy metal efflux RND transporter, at 2,358,606 to 2,361,830 _RS11750 Position (kb) 2358 2359Strain fitness (log2 ratio) -2 -1 0 1 2at 2357.082 kb on + strandat 2357.402 kb on + strandat 2357.589 kb on + strand, within A4249_RS11740at 2357.589 kb on + strand, within A4249_RS11740at 2357.589 kb on + strand, within A4249_RS11740at 2357.589 kb on + strand, within A4249_RS11740at 2357.589 kb on + strand, within A4249_RS11740at 2357.590 kb on - strand, within A4249_RS11740at 2357.590 kb on - strand, within A4249_RS11740at 2357.598 kb on + strand, within A4249_RS11740at 2357.598 kb on + strand, within A4249_RS11740at 2357.599 kb on - strand, within A4249_RS11740at 2357.599 kb on - strand, within A4249_RS11740at 2357.599 kb on - strand, within A4249_RS11740at 2357.748 kb on + strand, within A4249_RS11740at 2357.748 kb on + strand, within A4249_RS11740at 2357.748 kb on + strand, within A4249_RS11740at 2357.749 kb on - strand, within A4249_RS11740at 2357.772 kb on + strand, within A4249_RS11740at 2357.772 kb on + strand, within A4249_RS11740at 2357.773 kb on - strand, within A4249_RS11740at 2357.817 kb on + strand, within A4249_RS11740at 2357.817 kb on + strand, within A4249_RS11740at 2357.817 kb on + strand, within A4249_RS11740at 2357.817 kb on - strand, within A4249_RS11740at 2357.818 kb on - strand, within A4249_RS11740at 2357.818 kb on - strand, within A4249_RS11740at 2358.052 kb on + strandat 2358.052 kb on + strandat 2358.053 kb on - strandat 2358.053 kb on - strandat 2358.079 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.447 kb on - strand, within A4249_RS11745at 2358.447 kb on - strand, within A4249_RS11745at 2358.447 kb on - strand, within A4249_RS11745at 2358.771 kb on - strandat 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.517 kb on - strand, within A4249_RS11750at 2359.517 kb on - strand, within A4249_RS11750at 2359.517 kb on - strand, within A4249_RS11750

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,357,082 + -1.4
2,357,402 + -2.0
2,357,589 + A4249_RS11740 0.32 +0.3
2,357,589 + A4249_RS11740 0.32 -0.9
2,357,589 + A4249_RS11740 0.32 -0.0
2,357,589 + A4249_RS11740 0.32 -0.4
2,357,589 + A4249_RS11740 0.32 +0.2
2,357,590 - A4249_RS11740 0.32 +0.8
2,357,590 - A4249_RS11740 0.32 +0.3
2,357,598 + A4249_RS11740 0.33 +0.1
2,357,598 + A4249_RS11740 0.33 -0.6
2,357,599 - A4249_RS11740 0.33 +0.0
2,357,599 - A4249_RS11740 0.33 +0.4
2,357,599 - A4249_RS11740 0.33 +0.3
2,357,748 + A4249_RS11740 0.58 +0.7
2,357,748 + A4249_RS11740 0.58 -0.2
2,357,748 + A4249_RS11740 0.58 +0.1
2,357,749 - A4249_RS11740 0.58 -1.9
2,357,772 + A4249_RS11740 0.61 -0.7
2,357,772 + A4249_RS11740 0.61 +0.2
2,357,773 - A4249_RS11740 0.62 +1.1
2,357,817 + A4249_RS11740 0.69 +1.0
2,357,817 + A4249_RS11740 0.69 -0.3
2,357,817 + A4249_RS11740 0.69 -0.6
2,357,817 - A4249_RS11740 0.69 -1.1
2,357,818 - A4249_RS11740 0.69 -0.2
2,357,818 - A4249_RS11740 0.69 +0.0
2,358,052 + +0.2
2,358,052 + -0.6
2,358,053 - -1.1
2,358,053 - +0.1
2,358,079 + A4249_RS11745 0.12 +0.1
2,358,446 + A4249_RS11745 0.73 +1.9
2,358,446 + A4249_RS11745 0.73 -0.6
2,358,446 + A4249_RS11745 0.73 +0.5
2,358,446 + A4249_RS11745 0.73 -0.2
2,358,446 + A4249_RS11745 0.73 +0.1
2,358,447 - A4249_RS11745 0.73 -0.7
2,358,447 - A4249_RS11745 0.73 +2.4
2,358,447 - A4249_RS11745 0.73 -0.0
2,358,771 - +0.5
2,359,516 + A4249_RS11750 0.28 -1.4
2,359,516 + A4249_RS11750 0.28 -0.0
2,359,516 + A4249_RS11750 0.28 -0.2
2,359,516 + A4249_RS11750 0.28 -0.4
2,359,516 + A4249_RS11750 0.28 -0.4
2,359,516 + A4249_RS11750 0.28 -1.1
2,359,516 + A4249_RS11750 0.28 -0.4
2,359,516 + A4249_RS11750 0.28 -0.9
2,359,516 + A4249_RS11750 0.28 +0.6
2,359,516 + A4249_RS11750 0.28 +0.2
2,359,517 - A4249_RS11750 0.28 -1.9
2,359,517 - A4249_RS11750 0.28 -0.7
2,359,517 - A4249_RS11750 0.28 -0.9

Or see this region's nucleotide sequence