Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11685 and A4249_RS16635 overlap by 4 nucleotides A4249_RS16635 and A4249_RS11690 overlap by 4 nucleotides A4249_RS11690 and A4249_RS16640 are separated by 483 nucleotides
A4249_RS11685: A4249_RS11685 - PfkB family carbohydrate kinase, at 2,345,641 to 2,346,834
_RS11685
A4249_RS16635: A4249_RS16635 - hypothetical protein, at 2,346,831 to 2,347,097
_RS16635
A4249_RS11690: A4249_RS11690 - endonuclease III domain-containing protein, at 2,347,094 to 2,348,002
_RS11690
A4249_RS16640: A4249_RS16640 - lasso peptide biosynthesis B2 protein, at 2,348,486 to 2,349,580
_RS16640
Position (kb)
2347
2348
2349 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2346.098 kb on + strand, within A4249_RS11685 at 2346.098 kb on + strand, within A4249_RS11685 at 2346.099 kb on - strand, within A4249_RS11685 at 2346.099 kb on - strand, within A4249_RS11685 at 2346.099 kb on - strand, within A4249_RS11685 at 2346.099 kb on - strand, within A4249_RS11685 at 2346.099 kb on - strand, within A4249_RS11685 at 2346.101 kb on + strand, within A4249_RS11685 at 2346.101 kb on + strand, within A4249_RS11685 at 2346.101 kb on + strand, within A4249_RS11685 at 2346.101 kb on + strand, within A4249_RS11685 at 2346.102 kb on - strand, within A4249_RS11685 at 2346.102 kb on - strand, within A4249_RS11685 at 2346.102 kb on - strand, within A4249_RS11685 at 2346.327 kb on + strand, within A4249_RS11685 at 2346.388 kb on + strand, within A4249_RS11685 at 2346.388 kb on + strand, within A4249_RS11685 at 2346.388 kb on + strand, within A4249_RS11685 at 2346.388 kb on + strand, within A4249_RS11685 at 2346.389 kb on - strand, within A4249_RS11685 at 2346.389 kb on - strand, within A4249_RS11685 at 2346.389 kb on - strand, within A4249_RS11685 at 2346.389 kb on - strand, within A4249_RS11685 at 2346.389 kb on - strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.458 kb on + strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.459 kb on - strand, within A4249_RS11685 at 2346.599 kb on + strand, within A4249_RS11685 at 2346.599 kb on + strand, within A4249_RS11685 at 2346.599 kb on + strand, within A4249_RS11685 at 2346.599 kb on + strand, within A4249_RS11685 at 2346.599 kb on + strand, within A4249_RS11685 at 2346.600 kb on - strand, within A4249_RS11685 at 2346.600 kb on - strand, within A4249_RS11685 at 2346.600 kb on - strand, within A4249_RS11685 at 2346.698 kb on + strand, within A4249_RS11685 at 2346.698 kb on + strand, within A4249_RS11685 at 2346.698 kb on + strand, within A4249_RS11685 at 2346.698 kb on + strand, within A4249_RS11685 at 2346.698 kb on + strand, within A4249_RS11685 at 2346.698 kb on + strand, within A4249_RS11685 at 2346.699 kb on - strand, within A4249_RS11685 at 2346.699 kb on - strand, within A4249_RS11685 at 2346.699 kb on - strand, within A4249_RS11685 at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.764 kb on + strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.765 kb on - strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.766 kb on + strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.767 kb on - strand at 2346.803 kb on + strand at 2346.804 kb on - strand at 2346.835 kb on - strand at 2346.835 kb on - strand at 2346.835 kb on - strand at 2346.856 kb on + strand at 2346.856 kb on + strand at 2346.856 kb on + strand at 2346.856 kb on + strand at 2346.856 kb on + strand at 2346.856 kb on + strand at 2346.856 kb on + strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.857 kb on - strand at 2346.892 kb on + strand, within A4249_RS16635 at 2346.892 kb on + strand, within A4249_RS16635 at 2346.892 kb on + strand, within A4249_RS16635 at 2346.893 kb on - strand, within A4249_RS16635 at 2346.893 kb on - strand, within A4249_RS16635 at 2346.893 kb on - strand, within A4249_RS16635 at 2346.893 kb on - strand, within A4249_RS16635 at 2346.926 kb on + strand, within A4249_RS16635 at 2346.926 kb on + strand, within A4249_RS16635 at 2346.926 kb on + strand, within A4249_RS16635 at 2346.926 kb on + strand, within A4249_RS16635 at 2346.927 kb on - strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.931 kb on + strand, within A4249_RS16635 at 2346.932 kb on - strand, within A4249_RS16635 at 2346.932 kb on - strand, within A4249_RS16635 at 2346.987 kb on + strand, within A4249_RS16635 at 2347.029 kb on - strand, within A4249_RS16635 at 2347.073 kb on + strand at 2347.073 kb on + strand at 2347.074 kb on - strand at 2347.162 kb on + strand at 2347.162 kb on + strand at 2347.162 kb on + strand at 2347.162 kb on + strand at 2347.162 kb on + strand at 2347.163 kb on - strand at 2347.163 kb on - strand at 2347.163 kb on - strand at 2347.178 kb on + strand at 2347.193 kb on + strand, within A4249_RS11690 at 2347.194 kb on - strand, within A4249_RS11690 at 2347.266 kb on - strand, within A4249_RS11690 at 2347.266 kb on - strand, within A4249_RS11690 at 2347.266 kb on - strand, within A4249_RS11690 at 2347.266 kb on - strand, within A4249_RS11690 at 2347.383 kb on + strand, within A4249_RS11690 at 2347.383 kb on + strand, within A4249_RS11690 at 2347.384 kb on - strand, within A4249_RS11690 at 2347.384 kb on - strand, within A4249_RS11690 at 2347.384 kb on - strand, within A4249_RS11690 at 2347.384 kb on - strand, within A4249_RS11690 at 2347.384 kb on - strand, within A4249_RS11690 at 2347.444 kb on + strand, within A4249_RS11690 at 2347.444 kb on + strand, within A4249_RS11690 at 2347.444 kb on + strand, within A4249_RS11690 at 2347.444 kb on + strand, within A4249_RS11690 at 2347.444 kb on + strand, within A4249_RS11690 at 2347.445 kb on - strand, within A4249_RS11690 at 2347.526 kb on + strand, within A4249_RS11690 at 2347.607 kb on + strand, within A4249_RS11690 at 2347.607 kb on + strand, within A4249_RS11690 at 2347.607 kb on + strand, within A4249_RS11690 at 2347.607 kb on + strand, within A4249_RS11690 at 2347.607 kb on + strand, within A4249_RS11690 at 2347.608 kb on - strand, within A4249_RS11690 at 2347.608 kb on - strand, within A4249_RS11690 at 2347.611 kb on + strand, within A4249_RS11690 at 2347.611 kb on + strand, within A4249_RS11690 at 2347.611 kb on + strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.612 kb on - strand, within A4249_RS11690 at 2347.659 kb on - strand, within A4249_RS11690 at 2347.659 kb on - strand, within A4249_RS11690 at 2348.020 kb on - strand at 2348.020 kb on - strand at 2348.036 kb on - strand at 2348.066 kb on + strand at 2348.066 kb on + strand at 2348.066 kb on + strand at 2348.066 kb on + strand at 2348.066 kb on + strand at 2348.067 kb on - strand at 2348.067 kb on - strand at 2348.085 kb on - strand at 2348.085 kb on - strand at 2348.165 kb on + strand at 2348.165 kb on + strand at 2348.166 kb on - strand at 2348.309 kb on + strand at 2348.310 kb on - strand at 2348.352 kb on + strand at 2348.353 kb on - strand at 2348.367 kb on + strand at 2348.368 kb on - strand at 2348.431 kb on + strand at 2348.431 kb on + strand at 2348.432 kb on - strand at 2348.432 kb on - strand at 2348.432 kb on - strand at 2348.432 kb on - strand at 2348.442 kb on + strand at 2348.443 kb on - strand at 2348.443 kb on - strand at 2348.700 kb on - strand, within A4249_RS16640 at 2348.759 kb on + strand, within A4249_RS16640 at 2348.760 kb on - strand, within A4249_RS16640 at 2348.778 kb on + strand, within A4249_RS16640 at 2348.778 kb on + strand, within A4249_RS16640 at 2348.779 kb on - strand, within A4249_RS16640 at 2348.817 kb on + strand, within A4249_RS16640 at 2348.818 kb on - strand, within A4249_RS16640
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,346,098 + A4249_RS11685 0.38 -0.2 2,346,098 + A4249_RS11685 0.38 -1.0 2,346,099 - A4249_RS11685 0.38 -0.2 2,346,099 - A4249_RS11685 0.38 +0.1 2,346,099 - A4249_RS11685 0.38 -0.7 2,346,099 - A4249_RS11685 0.38 +0.2 2,346,099 - A4249_RS11685 0.38 -0.9 2,346,101 + A4249_RS11685 0.39 +1.3 2,346,101 + A4249_RS11685 0.39 -0.3 2,346,101 + A4249_RS11685 0.39 +1.0 2,346,101 + A4249_RS11685 0.39 -0.1 2,346,102 - A4249_RS11685 0.39 -1.6 2,346,102 - A4249_RS11685 0.39 +1.0 2,346,102 - A4249_RS11685 0.39 -0.9 2,346,327 + A4249_RS11685 0.57 +0.3 2,346,388 + A4249_RS11685 0.63 -0.1 2,346,388 + A4249_RS11685 0.63 +0.3 2,346,388 + A4249_RS11685 0.63 -0.0 2,346,388 + A4249_RS11685 0.63 +0.3 2,346,389 - A4249_RS11685 0.63 +1.1 2,346,389 - A4249_RS11685 0.63 -0.2 2,346,389 - A4249_RS11685 0.63 -0.0 2,346,389 - A4249_RS11685 0.63 -1.6 2,346,389 - A4249_RS11685 0.63 -0.3 2,346,458 + A4249_RS11685 0.68 +1.0 2,346,458 + A4249_RS11685 0.68 -0.2 2,346,458 + A4249_RS11685 0.68 -1.6 2,346,458 + A4249_RS11685 0.68 -0.0 2,346,458 + A4249_RS11685 0.68 -0.0 2,346,458 + A4249_RS11685 0.68 -0.2 2,346,458 + A4249_RS11685 0.68 -0.1 2,346,458 + A4249_RS11685 0.68 +0.0 2,346,458 + A4249_RS11685 0.68 +0.2 2,346,458 + A4249_RS11685 0.68 +1.4 2,346,458 + A4249_RS11685 0.68 +0.4 2,346,458 + A4249_RS11685 0.68 +0.6 2,346,458 + A4249_RS11685 0.68 +0.0 2,346,459 - A4249_RS11685 0.69 +0.1 2,346,459 - A4249_RS11685 0.69 +0.2 2,346,459 - A4249_RS11685 0.69 +0.5 2,346,459 - A4249_RS11685 0.69 -0.5 2,346,459 - A4249_RS11685 0.69 +0.6 2,346,459 - A4249_RS11685 0.69 -0.2 2,346,459 - A4249_RS11685 0.69 -1.1 2,346,459 - A4249_RS11685 0.69 -0.2 2,346,459 - A4249_RS11685 0.69 +0.9 2,346,459 - A4249_RS11685 0.69 -1.5 2,346,459 - A4249_RS11685 0.69 +0.9 2,346,459 - A4249_RS11685 0.69 +0.1 2,346,459 - A4249_RS11685 0.69 +1.4 2,346,599 + A4249_RS11685 0.80 +0.2 2,346,599 + A4249_RS11685 0.80 +0.2 2,346,599 + A4249_RS11685 0.80 -0.4 2,346,599 + A4249_RS11685 0.80 +1.6 2,346,599 + A4249_RS11685 0.80 -0.5 2,346,600 - A4249_RS11685 0.80 +0.1 2,346,600 - A4249_RS11685 0.80 +0.4 2,346,600 - A4249_RS11685 0.80 +0.1 2,346,698 + A4249_RS11685 0.89 -0.1 2,346,698 + A4249_RS11685 0.89 -0.7 2,346,698 + A4249_RS11685 0.89 -0.1 2,346,698 + A4249_RS11685 0.89 +0.3 2,346,698 + A4249_RS11685 0.89 -0.9 2,346,698 + A4249_RS11685 0.89 +0.3 2,346,699 - A4249_RS11685 0.89 -1.4 2,346,699 - A4249_RS11685 0.89 -2.5 2,346,699 - A4249_RS11685 0.89 +2.1 2,346,764 + -0.1 2,346,764 + +0.5 2,346,764 + +0.2 2,346,764 + -0.8 2,346,764 + -0.3 2,346,764 + -0.3 2,346,764 + -0.0 2,346,764 + +0.7 2,346,764 + +0.8 2,346,765 - -0.6 2,346,765 - -0.3 2,346,765 - -1.9 2,346,765 - +0.3 2,346,765 - -0.4 2,346,765 - -0.1 2,346,765 - +0.1 2,346,765 - -0.1 2,346,765 - -0.9 2,346,765 - +0.1 2,346,765 - +0.2 2,346,765 - +0.0 2,346,765 - +0.3 2,346,765 - -0.1 2,346,766 + +1.0 2,346,766 + -1.3 2,346,766 + +0.6 2,346,766 + -0.2 2,346,766 + -0.6 2,346,766 + +0.4 2,346,766 + -0.2 2,346,766 + -0.6 2,346,766 + -0.2 2,346,766 + +0.8 2,346,766 + -0.5 2,346,766 + +0.6 2,346,766 + -0.3 2,346,766 + -0.2 2,346,766 + -1.9 2,346,767 - -1.5 2,346,767 - +0.9 2,346,767 - -2.8 2,346,767 - +1.0 2,346,767 - -0.1 2,346,767 - -0.7 2,346,767 - -1.4 2,346,767 - +0.2 2,346,767 - +0.4 2,346,767 - +0.4 2,346,767 - +0.2 2,346,767 - +0.5 2,346,767 - -0.4 2,346,767 - -1.2 2,346,803 + +0.3 2,346,804 - -0.0 2,346,835 - -0.2 2,346,835 - -0.9 2,346,835 - -0.9 2,346,856 + -0.9 2,346,856 + -0.3 2,346,856 + +0.2 2,346,856 + -0.1 2,346,856 + -0.7 2,346,856 + -0.6 2,346,856 + -0.3 2,346,857 - -0.4 2,346,857 - -0.6 2,346,857 - -0.2 2,346,857 - +0.6 2,346,857 - -0.1 2,346,857 - -0.9 2,346,857 - -1.1 2,346,857 - -0.1 2,346,892 + A4249_RS16635 0.23 +0.1 2,346,892 + A4249_RS16635 0.23 -0.5 2,346,892 + A4249_RS16635 0.23 +0.2 2,346,893 - A4249_RS16635 0.23 -1.1 2,346,893 - A4249_RS16635 0.23 -0.1 2,346,893 - A4249_RS16635 0.23 -1.6 2,346,893 - A4249_RS16635 0.23 +1.3 2,346,926 + A4249_RS16635 0.36 -0.4 2,346,926 + A4249_RS16635 0.36 +0.1 2,346,926 + A4249_RS16635 0.36 +1.2 2,346,926 + A4249_RS16635 0.36 +0.1 2,346,927 - A4249_RS16635 0.36 -0.3 2,346,931 + A4249_RS16635 0.37 -0.4 2,346,931 + A4249_RS16635 0.37 +0.0 2,346,931 + A4249_RS16635 0.37 -0.0 2,346,931 + A4249_RS16635 0.37 -0.1 2,346,931 + A4249_RS16635 0.37 -0.7 2,346,931 + A4249_RS16635 0.37 -1.6 2,346,931 + A4249_RS16635 0.37 -2.1 2,346,932 - A4249_RS16635 0.38 -0.4 2,346,932 - A4249_RS16635 0.38 +0.4 2,346,987 + A4249_RS16635 0.58 -0.1 2,347,029 - A4249_RS16635 0.74 +0.5 2,347,073 + -0.2 2,347,073 + -0.2 2,347,074 - -0.3 2,347,162 + +0.1 2,347,162 + -1.3 2,347,162 + +0.5 2,347,162 + +0.6 2,347,162 + -0.3 2,347,163 - +0.3 2,347,163 - +1.3 2,347,163 - -2.1 2,347,178 + -0.7 2,347,193 + A4249_RS11690 0.11 -0.4 2,347,194 - A4249_RS11690 0.11 -0.3 2,347,266 - A4249_RS11690 0.19 +0.0 2,347,266 - A4249_RS11690 0.19 +1.1 2,347,266 - A4249_RS11690 0.19 -0.3 2,347,266 - A4249_RS11690 0.19 -0.2 2,347,383 + A4249_RS11690 0.32 -0.1 2,347,383 + A4249_RS11690 0.32 -0.4 2,347,384 - A4249_RS11690 0.32 +0.2 2,347,384 - A4249_RS11690 0.32 -0.6 2,347,384 - A4249_RS11690 0.32 -0.0 2,347,384 - A4249_RS11690 0.32 +0.7 2,347,384 - A4249_RS11690 0.32 -0.6 2,347,444 + A4249_RS11690 0.39 +0.0 2,347,444 + A4249_RS11690 0.39 +0.2 2,347,444 + A4249_RS11690 0.39 +0.0 2,347,444 + A4249_RS11690 0.39 +0.4 2,347,444 + A4249_RS11690 0.39 +0.1 2,347,445 - A4249_RS11690 0.39 +0.4 2,347,526 + A4249_RS11690 0.48 -0.9 2,347,607 + A4249_RS11690 0.56 -0.2 2,347,607 + A4249_RS11690 0.56 -0.4 2,347,607 + A4249_RS11690 0.56 +0.4 2,347,607 + A4249_RS11690 0.56 +2.3 2,347,607 + A4249_RS11690 0.56 +0.2 2,347,608 - A4249_RS11690 0.57 +0.6 2,347,608 - A4249_RS11690 0.57 +0.6 2,347,611 + A4249_RS11690 0.57 +0.4 2,347,611 + A4249_RS11690 0.57 +0.1 2,347,611 + A4249_RS11690 0.57 +0.3 2,347,612 - A4249_RS11690 0.57 +0.4 2,347,612 - A4249_RS11690 0.57 +0.5 2,347,612 - A4249_RS11690 0.57 -0.0 2,347,612 - A4249_RS11690 0.57 -0.1 2,347,612 - A4249_RS11690 0.57 -0.8 2,347,612 - A4249_RS11690 0.57 +0.6 2,347,612 - A4249_RS11690 0.57 -1.3 2,347,659 - A4249_RS11690 0.62 -0.3 2,347,659 - A4249_RS11690 0.62 -0.4 2,348,020 - +0.6 2,348,020 - -0.0 2,348,036 - +1.1 2,348,066 + -1.7 2,348,066 + -0.3 2,348,066 + +0.3 2,348,066 + +0.1 2,348,066 + +0.0 2,348,067 - -0.2 2,348,067 - +0.4 2,348,085 - -0.1 2,348,085 - -0.1 2,348,165 + -1.5 2,348,165 + -0.5 2,348,166 - +0.5 2,348,309 + +0.2 2,348,310 - +0.4 2,348,352 + +0.5 2,348,353 - +0.5 2,348,367 + +0.2 2,348,368 - -1.3 2,348,431 + +0.8 2,348,431 + -1.0 2,348,432 - -1.5 2,348,432 - -2.6 2,348,432 - +0.4 2,348,432 - +1.7 2,348,442 + +0.0 2,348,443 - +1.0 2,348,443 - -0.6 2,348,700 - A4249_RS16640 0.20 +1.4 2,348,759 + A4249_RS16640 0.25 +1.5 2,348,760 - A4249_RS16640 0.25 -0.5 2,348,778 + A4249_RS16640 0.27 -1.0 2,348,778 + A4249_RS16640 0.27 -1.5 2,348,779 - A4249_RS16640 0.27 +1.1 2,348,817 + A4249_RS16640 0.30 -1.4 2,348,818 - A4249_RS16640 0.30 +0.1
Or see this region's nucleotide sequence