Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11430

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11420 and A4249_RS11425 are separated by 71 nucleotidesA4249_RS11425 and A4249_RS11430 overlap by 4 nucleotidesA4249_RS11430 and A4249_RS11435 overlap by 4 nucleotidesA4249_RS11435 and A4249_RS11440 are separated by 0 nucleotides A4249_RS11420: A4249_RS11420 - zinc-ribbon domain-containing protein, at 2,297,762 to 2,298,700 _RS11420 A4249_RS11425: A4249_RS11425 - ATP-binding cassette domain-containing protein, at 2,298,772 to 2,299,482 _RS11425 A4249_RS11430: A4249_RS11430 - cell division protein, at 2,299,479 to 2,300,393 _RS11430 A4249_RS11435: A4249_RS11435 - YdcF family protein, at 2,300,390 to 2,301,034 _RS11435 A4249_RS11440: A4249_RS11440 - lysophospholipid acyltransferase family protein, at 2,301,035 to 2,301,772 _RS11440 Position (kb) 2299 2300 2301Strain fitness (log2 ratio) -2 -1 0 1at 2298.666 kb on + strandat 2298.666 kb on + strandat 2298.666 kb on + strandat 2298.666 kb on + strandat 2298.666 kb on + strandat 2298.666 kb on + strandat 2298.667 kb on - strandat 2298.667 kb on - strandat 2298.667 kb on - strandat 2298.667 kb on - strandat 2298.695 kb on + strandat 2298.696 kb on - strandat 2298.696 kb on - strandat 2298.696 kb on - strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.768 kb on + strandat 2298.769 kb on - strandat 2298.769 kb on - strandat 2298.769 kb on - strandat 2298.769 kb on - strandat 2298.769 kb on - strandat 2298.769 kb on - strandat 2298.769 kb on - strandat 2298.801 kb on + strandat 2298.841 kb on + strandat 2298.841 kb on + strandat 2298.842 kb on - strandat 2298.941 kb on + strand, within A4249_RS11425at 2298.941 kb on + strand, within A4249_RS11425at 2298.941 kb on + strand, within A4249_RS11425at 2298.941 kb on + strand, within A4249_RS11425at 2298.942 kb on - strand, within A4249_RS11425at 2299.150 kb on + strand, within A4249_RS11425at 2299.499 kb on + strandat 2299.499 kb on + strandat 2299.500 kb on - strandat 2299.932 kb on - strand, within A4249_RS11430at 2300.049 kb on + strand, within A4249_RS11430at 2300.049 kb on + strand, within A4249_RS11430at 2300.049 kb on + strand, within A4249_RS11430at 2300.049 kb on + strand, within A4249_RS11430at 2300.312 kb on + strandat 2300.313 kb on - strandat 2300.433 kb on + strandat 2300.777 kb on + strand, within A4249_RS11435at 2300.778 kb on - strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.782 kb on + strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.783 kb on - strand, within A4249_RS11435at 2300.840 kb on + strand, within A4249_RS11435at 2300.841 kb on - strand, within A4249_RS11435at 2300.918 kb on + strand, within A4249_RS11435at 2300.918 kb on + strand, within A4249_RS11435at 2300.918 kb on + strand, within A4249_RS11435at 2300.918 kb on + strand, within A4249_RS11435at 2300.918 kb on + strand, within A4249_RS11435at 2300.918 kb on + strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.919 kb on - strand, within A4249_RS11435at 2300.920 kb on + strand, within A4249_RS11435at 2300.920 kb on + strand, within A4249_RS11435at 2300.920 kb on + strand, within A4249_RS11435at 2300.920 kb on + strand, within A4249_RS11435at 2300.920 kb on + strand, within A4249_RS11435at 2300.921 kb on - strand, within A4249_RS11435at 2300.921 kb on - strand, within A4249_RS11435at 2300.921 kb on - strand, within A4249_RS11435at 2300.921 kb on - strand, within A4249_RS11435at 2300.921 kb on - strand, within A4249_RS11435at 2300.927 kb on + strand, within A4249_RS11435at 2300.927 kb on + strand, within A4249_RS11435at 2300.927 kb on + strand, within A4249_RS11435at 2300.927 kb on + strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2300.928 kb on - strand, within A4249_RS11435at 2301.032 kb on + strandat 2301.032 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,298,666 + -0.0
2,298,666 + -0.9
2,298,666 + -0.6
2,298,666 + +0.1
2,298,666 + -1.5
2,298,666 + +0.8
2,298,667 - -0.3
2,298,667 - +0.5
2,298,667 - -0.2
2,298,667 - -0.4
2,298,695 + -0.8
2,298,696 - -1.8
2,298,696 - -0.2
2,298,696 - -0.4
2,298,768 + +0.5
2,298,768 + +1.1
2,298,768 + -0.3
2,298,768 + +1.0
2,298,768 + +0.1
2,298,768 + +0.4
2,298,768 + -1.2
2,298,768 + -0.2
2,298,768 + -2.0
2,298,769 - -0.2
2,298,769 - +0.3
2,298,769 - +0.0
2,298,769 - +0.2
2,298,769 - -0.4
2,298,769 - +0.0
2,298,769 - +0.7
2,298,801 + +0.4
2,298,841 + -0.3
2,298,841 + +0.8
2,298,842 - -0.4
2,298,941 + A4249_RS11425 0.24 -1.5
2,298,941 + A4249_RS11425 0.24 -0.3
2,298,941 + A4249_RS11425 0.24 -1.4
2,298,941 + A4249_RS11425 0.24 +0.3
2,298,942 - A4249_RS11425 0.24 +1.3
2,299,150 + A4249_RS11425 0.53 -1.5
2,299,499 + +0.2
2,299,499 + +0.1
2,299,500 - -0.3
2,299,932 - A4249_RS11430 0.50 +0.1
2,300,049 + A4249_RS11430 0.62 +0.1
2,300,049 + A4249_RS11430 0.62 -0.3
2,300,049 + A4249_RS11430 0.62 -0.2
2,300,049 + A4249_RS11430 0.62 -1.7
2,300,312 + -1.3
2,300,313 - -1.3
2,300,433 + +0.2
2,300,777 + A4249_RS11435 0.60 -0.4
2,300,778 - A4249_RS11435 0.60 -0.3
2,300,782 + A4249_RS11435 0.61 -0.4
2,300,782 + A4249_RS11435 0.61 -0.3
2,300,782 + A4249_RS11435 0.61 +0.8
2,300,782 + A4249_RS11435 0.61 -0.6
2,300,782 + A4249_RS11435 0.61 -0.2
2,300,782 + A4249_RS11435 0.61 +0.0
2,300,782 + A4249_RS11435 0.61 -0.3
2,300,782 + A4249_RS11435 0.61 -0.1
2,300,782 + A4249_RS11435 0.61 -0.5
2,300,782 + A4249_RS11435 0.61 -0.2
2,300,782 + A4249_RS11435 0.61 -0.4
2,300,782 + A4249_RS11435 0.61 -0.1
2,300,782 + A4249_RS11435 0.61 -0.0
2,300,782 + A4249_RS11435 0.61 -0.2
2,300,783 - A4249_RS11435 0.61 -0.2
2,300,783 - A4249_RS11435 0.61 -0.4
2,300,783 - A4249_RS11435 0.61 +0.3
2,300,783 - A4249_RS11435 0.61 -0.1
2,300,783 - A4249_RS11435 0.61 -0.1
2,300,783 - A4249_RS11435 0.61 +0.1
2,300,783 - A4249_RS11435 0.61 -0.0
2,300,783 - A4249_RS11435 0.61 -0.0
2,300,783 - A4249_RS11435 0.61 +0.2
2,300,783 - A4249_RS11435 0.61 +0.0
2,300,783 - A4249_RS11435 0.61 -1.0
2,300,783 - A4249_RS11435 0.61 +0.1
2,300,783 - A4249_RS11435 0.61 -0.1
2,300,783 - A4249_RS11435 0.61 -0.2
2,300,783 - A4249_RS11435 0.61 -0.1
2,300,783 - A4249_RS11435 0.61 -0.2
2,300,783 - A4249_RS11435 0.61 -0.3
2,300,783 - A4249_RS11435 0.61 -0.2
2,300,783 - A4249_RS11435 0.61 -0.4
2,300,783 - A4249_RS11435 0.61 -0.0
2,300,840 + A4249_RS11435 0.70 -0.4
2,300,841 - A4249_RS11435 0.70 -0.1
2,300,918 + A4249_RS11435 0.82 +0.1
2,300,918 + A4249_RS11435 0.82 -0.5
2,300,918 + A4249_RS11435 0.82 -0.0
2,300,918 + A4249_RS11435 0.82 -0.2
2,300,918 + A4249_RS11435 0.82 -0.2
2,300,918 + A4249_RS11435 0.82 -0.3
2,300,919 - A4249_RS11435 0.82 -0.4
2,300,919 - A4249_RS11435 0.82 -0.2
2,300,919 - A4249_RS11435 0.82 -0.2
2,300,919 - A4249_RS11435 0.82 +0.1
2,300,919 - A4249_RS11435 0.82 -0.2
2,300,919 - A4249_RS11435 0.82 -0.4
2,300,919 - A4249_RS11435 0.82 -0.3
2,300,919 - A4249_RS11435 0.82 -0.5
2,300,919 - A4249_RS11435 0.82 -0.0
2,300,920 + A4249_RS11435 0.82 +0.0
2,300,920 + A4249_RS11435 0.82 -0.2
2,300,920 + A4249_RS11435 0.82 -0.6
2,300,920 + A4249_RS11435 0.82 -0.1
2,300,920 + A4249_RS11435 0.82 -0.1
2,300,921 - A4249_RS11435 0.82 -0.0
2,300,921 - A4249_RS11435 0.82 +0.3
2,300,921 - A4249_RS11435 0.82 -0.1
2,300,921 - A4249_RS11435 0.82 -0.0
2,300,921 - A4249_RS11435 0.82 -0.2
2,300,927 + A4249_RS11435 0.83 -0.5
2,300,927 + A4249_RS11435 0.83 -0.4
2,300,927 + A4249_RS11435 0.83 +0.3
2,300,927 + A4249_RS11435 0.83 +0.2
2,300,928 - A4249_RS11435 0.83 -0.2
2,300,928 - A4249_RS11435 0.83 -0.1
2,300,928 - A4249_RS11435 0.83 +0.1
2,300,928 - A4249_RS11435 0.83 -0.2
2,300,928 - A4249_RS11435 0.83 -0.2
2,300,928 - A4249_RS11435 0.83 -0.2
2,300,928 - A4249_RS11435 0.83 +0.2
2,300,928 - A4249_RS11435 0.83 -0.6
2,300,928 - A4249_RS11435 0.83 +0.1
2,301,032 + -1.0
2,301,032 + -0.2

Or see this region's nucleotide sequence