Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10950 and A4249_RS16625 are separated by 129 nucleotides A4249_RS16625 and A4249_RS10955 are separated by 189 nucleotides A4249_RS10955 and A4249_RS10960 are separated by 52 nucleotides A4249_RS10960 and A4249_RS10965 are separated by 134 nucleotides A4249_RS10965 and A4249_RS10970 are separated by 112 nucleotides
A4249_RS10950: A4249_RS10950 - DUF1345 domain-containing protein, at 2,199,446 to 2,200,117
_RS10950
A4249_RS16625: A4249_RS16625 - hypothetical protein, at 2,200,247 to 2,200,390
_RS16625
A4249_RS10955: A4249_RS10955 - DNA polymerase III subunit epsilon, at 2,200,580 to 2,201,242
_RS10955
A4249_RS10960: A4249_RS10960 - tRNA-Val, at 2,201,295 to 2,201,369
_RS10960
A4249_RS10965: A4249_RS10965 - response regulator, at 2,201,504 to 2,201,860
_RS10965
A4249_RS10970: A4249_RS10970 - N-formylglutamate amidohydrolase, at 2,201,973 to 2,202,797
_RS10970
Position (kb)
2200
2201
2202 Strain fitness (log2 ratio)
-2
-1
0
1 at 2199.605 kb on + strand, within A4249_RS10950 at 2199.605 kb on + strand, within A4249_RS10950 at 2199.606 kb on - strand, within A4249_RS10950 at 2199.606 kb on - strand, within A4249_RS10950 at 2199.606 kb on - strand, within A4249_RS10950 at 2199.606 kb on - strand, within A4249_RS10950 at 2199.606 kb on - strand, within A4249_RS10950 at 2199.618 kb on + strand, within A4249_RS10950 at 2199.618 kb on + strand, within A4249_RS10950 at 2199.618 kb on + strand, within A4249_RS10950 at 2199.619 kb on - strand, within A4249_RS10950 at 2199.619 kb on - strand, within A4249_RS10950 at 2199.687 kb on + strand, within A4249_RS10950 at 2199.687 kb on + strand, within A4249_RS10950 at 2199.687 kb on + strand, within A4249_RS10950 at 2199.687 kb on + strand, within A4249_RS10950 at 2199.688 kb on - strand, within A4249_RS10950 at 2199.688 kb on - strand, within A4249_RS10950 at 2199.688 kb on - strand, within A4249_RS10950 at 2199.688 kb on - strand, within A4249_RS10950 at 2199.702 kb on + strand, within A4249_RS10950 at 2199.703 kb on - strand, within A4249_RS10950 at 2199.729 kb on + strand, within A4249_RS10950 at 2199.729 kb on + strand, within A4249_RS10950 at 2199.729 kb on + strand, within A4249_RS10950 at 2199.729 kb on + strand, within A4249_RS10950 at 2199.729 kb on + strand, within A4249_RS10950 at 2199.730 kb on - strand, within A4249_RS10950 at 2199.730 kb on - strand, within A4249_RS10950 at 2199.730 kb on - strand, within A4249_RS10950 at 2199.730 kb on - strand, within A4249_RS10950 at 2199.730 kb on - strand, within A4249_RS10950 at 2199.730 kb on - strand, within A4249_RS10950 at 2200.172 kb on + strand at 2200.212 kb on + strand at 2200.212 kb on + strand at 2200.212 kb on + strand at 2200.212 kb on + strand at 2200.212 kb on + strand at 2200.212 kb on + strand at 2200.212 kb on + strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.213 kb on - strand at 2200.280 kb on + strand, within A4249_RS16625 at 2200.280 kb on + strand, within A4249_RS16625 at 2200.280 kb on + strand, within A4249_RS16625 at 2200.280 kb on + strand, within A4249_RS16625 at 2200.281 kb on - strand, within A4249_RS16625 at 2200.281 kb on - strand, within A4249_RS16625 at 2200.281 kb on - strand, within A4249_RS16625 at 2200.636 kb on - strand at 2200.636 kb on - strand at 2200.713 kb on - strand, within A4249_RS10955 at 2200.799 kb on + strand, within A4249_RS10955 at 2200.800 kb on - strand, within A4249_RS10955 at 2200.904 kb on + strand, within A4249_RS10955 at 2200.904 kb on + strand, within A4249_RS10955 at 2200.904 kb on + strand, within A4249_RS10955 at 2200.904 kb on + strand, within A4249_RS10955 at 2200.905 kb on - strand, within A4249_RS10955 at 2200.905 kb on - strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.973 kb on + strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2200.974 kb on - strand, within A4249_RS10955 at 2201.240 kb on + strand at 2201.725 kb on - strand, within A4249_RS10965 at 2201.894 kb on - strand at 2201.908 kb on - strand at 2201.962 kb on + strand at 2201.962 kb on + strand at 2201.963 kb on - strand at 2202.070 kb on - strand, within A4249_RS10970 at 2202.070 kb on - strand, within A4249_RS10970 at 2202.207 kb on + strand, within A4249_RS10970 at 2202.207 kb on + strand, within A4249_RS10970 at 2202.207 kb on + strand, within A4249_RS10970 at 2202.207 kb on + strand, within A4249_RS10970 at 2202.207 kb on + strand, within A4249_RS10970 at 2202.208 kb on - strand, within A4249_RS10970 at 2202.208 kb on - strand, within A4249_RS10970 at 2202.208 kb on - strand, within A4249_RS10970 at 2202.208 kb on - strand, within A4249_RS10970 at 2202.208 kb on - strand, within A4249_RS10970
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,199,605 + A4249_RS10950 0.24 +1.3 2,199,605 + A4249_RS10950 0.24 +0.9 2,199,606 - A4249_RS10950 0.24 +0.1 2,199,606 - A4249_RS10950 0.24 +1.0 2,199,606 - A4249_RS10950 0.24 +0.9 2,199,606 - A4249_RS10950 0.24 +0.1 2,199,606 - A4249_RS10950 0.24 -0.4 2,199,618 + A4249_RS10950 0.26 -0.3 2,199,618 + A4249_RS10950 0.26 +0.1 2,199,618 + A4249_RS10950 0.26 -0.5 2,199,619 - A4249_RS10950 0.26 +0.1 2,199,619 - A4249_RS10950 0.26 +0.3 2,199,687 + A4249_RS10950 0.36 -0.3 2,199,687 + A4249_RS10950 0.36 -0.3 2,199,687 + A4249_RS10950 0.36 -2.3 2,199,687 + A4249_RS10950 0.36 +0.7 2,199,688 - A4249_RS10950 0.36 +0.1 2,199,688 - A4249_RS10950 0.36 +0.8 2,199,688 - A4249_RS10950 0.36 -0.4 2,199,688 - A4249_RS10950 0.36 -0.9 2,199,702 + A4249_RS10950 0.38 -1.0 2,199,703 - A4249_RS10950 0.38 +1.5 2,199,729 + A4249_RS10950 0.42 +0.9 2,199,729 + A4249_RS10950 0.42 -0.5 2,199,729 + A4249_RS10950 0.42 -0.5 2,199,729 + A4249_RS10950 0.42 +0.3 2,199,729 + A4249_RS10950 0.42 +0.3 2,199,730 - A4249_RS10950 0.42 +0.9 2,199,730 - A4249_RS10950 0.42 -2.0 2,199,730 - A4249_RS10950 0.42 +0.8 2,199,730 - A4249_RS10950 0.42 +1.0 2,199,730 - A4249_RS10950 0.42 +1.4 2,199,730 - A4249_RS10950 0.42 +0.2 2,200,172 + -0.7 2,200,212 + +0.1 2,200,212 + -0.3 2,200,212 + -0.2 2,200,212 + +0.5 2,200,212 + -0.4 2,200,212 + -0.1 2,200,212 + -0.4 2,200,213 - +0.9 2,200,213 - +1.5 2,200,213 - +0.2 2,200,213 - +0.2 2,200,213 - +0.6 2,200,213 - +0.7 2,200,213 - +0.5 2,200,213 - -1.5 2,200,213 - +0.2 2,200,213 - -0.2 2,200,280 + A4249_RS16625 0.23 -0.3 2,200,280 + A4249_RS16625 0.23 +1.2 2,200,280 + A4249_RS16625 0.23 +0.0 2,200,280 + A4249_RS16625 0.23 +0.8 2,200,281 - A4249_RS16625 0.24 -0.4 2,200,281 - A4249_RS16625 0.24 +0.6 2,200,281 - A4249_RS16625 0.24 +0.7 2,200,636 - +0.5 2,200,636 - -2.4 2,200,713 - A4249_RS10955 0.20 +0.1 2,200,799 + A4249_RS10955 0.33 +0.9 2,200,800 - A4249_RS10955 0.33 +0.1 2,200,904 + A4249_RS10955 0.49 +0.2 2,200,904 + A4249_RS10955 0.49 -0.5 2,200,904 + A4249_RS10955 0.49 +0.6 2,200,904 + A4249_RS10955 0.49 +0.0 2,200,905 - A4249_RS10955 0.49 +0.5 2,200,905 - A4249_RS10955 0.49 +0.8 2,200,973 + A4249_RS10955 0.59 +0.9 2,200,973 + A4249_RS10955 0.59 -1.3 2,200,973 + A4249_RS10955 0.59 +0.1 2,200,973 + A4249_RS10955 0.59 -0.1 2,200,973 + A4249_RS10955 0.59 -2.1 2,200,973 + A4249_RS10955 0.59 +0.9 2,200,973 + A4249_RS10955 0.59 -0.2 2,200,973 + A4249_RS10955 0.59 +0.5 2,200,973 + A4249_RS10955 0.59 +0.2 2,200,974 - A4249_RS10955 0.59 +0.2 2,200,974 - A4249_RS10955 0.59 +0.4 2,200,974 - A4249_RS10955 0.59 +0.7 2,200,974 - A4249_RS10955 0.59 +0.4 2,200,974 - A4249_RS10955 0.59 -0.0 2,200,974 - A4249_RS10955 0.59 -0.4 2,200,974 - A4249_RS10955 0.59 +0.6 2,201,240 + -0.1 2,201,725 - A4249_RS10965 0.62 +0.1 2,201,894 - -0.4 2,201,908 - +0.9 2,201,962 + -0.4 2,201,962 + +0.6 2,201,963 - -1.5 2,202,070 - A4249_RS10970 0.12 +1.2 2,202,070 - A4249_RS10970 0.12 -1.3 2,202,207 + A4249_RS10970 0.28 +1.1 2,202,207 + A4249_RS10970 0.28 +0.0 2,202,207 + A4249_RS10970 0.28 -1.9 2,202,207 + A4249_RS10970 0.28 -0.6 2,202,207 + A4249_RS10970 0.28 -0.0 2,202,208 - A4249_RS10970 0.28 -0.0 2,202,208 - A4249_RS10970 0.28 -0.5 2,202,208 - A4249_RS10970 0.28 -0.2 2,202,208 - A4249_RS10970 0.28 +1.0 2,202,208 - A4249_RS10970 0.28 -0.1
Or see this region's nucleotide sequence